RNA–Protein interactions for RNA: ENST00000355500.1

COMMD9-202, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 2,738 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-202ENST00000355500 RAB3GAP1Q15042 981 aa9.68□□□□□ -0.86
COMMD9-202ENST00000355500 HELBQ8NG08 1087 aaPredicted RBP9.68□□□□□ -0.86
COMMD9-202ENST00000355500 ZCRB1Q8TBF4 217 aaKnown RBP9.68□□□□□ -0.86
COMMD9-202ENST00000355500 DRC1Q96MC2 740 aa9.68□□□□□ -0.86
COMMD9-202ENST00000355500 METTL22Q9BUU2 404 aaPredicted RBP9.68□□□□□ -0.86
COMMD9-202ENST00000355500 MAP3K2Q9Y2U5 619 aa9.68□□□□□ -0.86
COMMD9-202ENST00000355500 CTDP1Q9Y5B0 961 aaPredicted RBP9.68□□□□□ -0.86
COMMD9-202ENST00000355500 KAT6BQ8WYB5 2073 aa9.68□□□□□ -0.86
COMMD9-202ENST00000355500 KIAA1551Q9HCM1 1747 aa9.68□□□□□ -0.86
COMMD9-202ENST00000355500 CYP27B1O15528 508 aa9.68□□□□□ -0.86
COMMD9-202ENST00000355500 NEXNQ0ZGT2 675 aa9.68□□□□□ -0.86
COMMD9-202ENST00000355500 C16orf71Q8IYS4 520 aaPredicted RBP9.68□□□□□ -0.86
COMMD9-202ENST00000355500 PI4K2BQ8TCG2 481 aa9.68□□□□□ -0.86
COMMD9-202ENST00000355500 RAD50Q92878 1312 aa9.68□□□□□ -0.86
COMMD9-202ENST00000355500 HIP1O00291 1037 aa9.67□□□□□ -0.86
COMMD9-202ENST00000355500 GLRX3O76003 335 aaKnown RBP9.67□□□□□ -0.86
COMMD9-202ENST00000355500 STK10O94804 968 aaKnown RBP9.67□□□□□ -0.86
COMMD9-202ENST00000355500 CHMLP26374 656 aa9.67□□□□□ -0.86
COMMD9-202ENST00000355500 TTC5Q8N0Z6 440 aa9.67□□□□□ -0.86
COMMD9-202ENST00000355500 OTUD7AQ8TE49 926 aaPredicted RBP9.67□□□□□ -0.86
COMMD9-202ENST00000355500 SRGAP3O43295 1099 aa9.67□□□□□ -0.86
COMMD9-202ENST00000355500 EIF2S2P20042 333 aaKnown RBP9.67□□□□□ -0.86
COMMD9-202ENST00000355500 RABL6Q3YEC7 729 aaPredicted RBP9.67□□□□□ -0.86
COMMD9-202ENST00000355500 CNTROBQ8N137 903 aa9.67□□□□□ -0.86
COMMD9-202ENST00000355500 FEZ2Q9UHY8 353 aaPredicted RBP9.67□□□□□ -0.86
COMMD9-202ENST00000355500 EXOC6BQ9Y2D4 811 aa9.67□□□□□ -0.86
COMMD9-202ENST00000355500 SKOR2Q2VWA4 1001 aaPredicted RBP9.66□□□□□ -0.86
COMMD9-202ENST00000355500 SMARCC1Q92922 1105 aaPredicted RBP9.66□□□□□ -0.86
COMMD9-202ENST00000355500 GBP4Q96PP9 640 aa9.66□□□□□ -0.86
COMMD9-202ENST00000355500 BSDC1Q9NW68 430 aaPredicted RBP9.66□□□□□ -0.86
COMMD9-202ENST00000355500 ARFGEF1Q9Y6D6 1849 aa9.66□□□□□ -0.86
COMMD9-202ENST00000355500 FRAT2O75474 233 aaPredicted RBP9.66□□□□□ -0.86
COMMD9-202ENST00000355500 NBPF7P0C2Y1 421 aaPredicted RBP9.66□□□□□ -0.86
COMMD9-202ENST00000355500 MCM4P33991 863 aa9.66□□□□□ -0.86
COMMD9-202ENST00000355500 FAM117AQ9C073 453 aa9.66□□□□□ -0.86
COMMD9-202ENST00000355500 NEURL1BA8MQ27 555 aa9.65□□□□□ -0.86
COMMD9-202ENST00000355500 CSB-PGBD3P0DP91 1061 aa9.65□□□□□ -0.86
COMMD9-202ENST00000355500 NUCB2P80303 420 aa9.65□□□□□ -0.86
COMMD9-202ENST00000355500 ZRSR2Q15696 482 aaKnown RBP9.65□□□□□ -0.86
COMMD9-202ENST00000355500 PLBD2Q8NHP8 589 aa9.65□□□□□ -0.86
COMMD9-202ENST00000355500 KCNB2Q92953 911 aa9.65□□□□□ -0.86
COMMD9-202ENST00000355500 INTS4Q96HW7 963 aaKnown RBP9.65□□□□□ -0.86
COMMD9-202ENST00000355500 C9orf78Q9NZ63 289 aaPredicted RBP9.65□□□□□ -0.86
COMMD9-202ENST00000355500 SURF6O75683 361 aaKnown RBP9.65□□□□□ -0.86
COMMD9-202ENST00000355500 LIG1P18858 919 aa9.65□□□□□ -0.86
COMMD9-202ENST00000355500 TEX13AQ9BXU3 409 aaPredicted RBP9.65□□□□□ -0.86
COMMD9-202ENST00000355500 COPRSQ9NQ92 184 aa9.65□□□□□ -0.86
COMMD9-202ENST00000355500 NRBP1Q9UHY1 535 aa9.65□□□□□ -0.86
COMMD9-202ENST00000355500 BRCA1P38398 1863 aaKnown RBP9.65□□□□□ -0.87
COMMD9-202ENST00000355500 GYS2P54840 703 aa9.64□□□□□ -0.87
COMMD9-202ENST00000355500 CABP4P57796 275 aa9.64□□□□□ -0.87
COMMD9-202ENST00000355500 SLC20A2Q08357 652 aa9.64□□□□□ -0.87
COMMD9-202ENST00000355500 GCKRQ14397 625 aa9.64□□□□□ -0.87
COMMD9-202ENST00000355500 CLASRPQ8N2M8 674 aaKnown RBP9.64□□□□□ -0.87
COMMD9-202ENST00000355500 RUFY2Q8WXA3 655 aa9.64□□□□□ -0.87
COMMD9-202ENST00000355500 ATG3Q9NT62 314 aa9.64□□□□□ -0.87
COMMD9-202ENST00000355500 C10orf71Q711Q0 1435 aa9.64□□□□□ -0.87
COMMD9-202ENST00000355500 CYP2E1P05181 493 aaPredicted RBP9.64□□□□□ -0.87
COMMD9-202ENST00000355500 YY1P25490 414 aa9.64□□□□□ -0.87
COMMD9-202ENST00000355500 PROSER3Q2NL68 480 aa9.64□□□□□ -0.87
COMMD9-202ENST00000355500 GPR108Q9NPR9 543 aa9.64□□□□□ -0.87
COMMD9-202ENST00000355500 CD2APQ9Y5K6 639 aa9.64□□□□□ -0.87
COMMD9-202ENST00000355500 LAMB2P55268 1798 aa9.64□□□□□ -0.87
COMMD9-202ENST00000355500 CCDC194A0A1B0GVG4 234 aa9.63□□□□□ -0.87
COMMD9-202ENST00000355500 CARNS1A5YM72 827 aa9.63□□□□□ -0.87
COMMD9-202ENST00000355500 IGKV5-2P06315 115 aa9.63□□□□□ -0.87
COMMD9-202ENST00000355500 HSPA4P34932 840 aa9.63□□□□□ -0.87
COMMD9-202ENST00000355500 CUL4AQ13619 759 aa9.63□□□□□ -0.87
COMMD9-202ENST00000355500 C11orf96Q7Z7L8 435 aa9.63□□□□□ -0.87
COMMD9-202ENST00000355500 TTC30BQ8N4P2 665 aa9.63□□□□□ -0.87
COMMD9-202ENST00000355500 NFATC2IPQ8NCF5 419 aa9.63□□□□□ -0.87
COMMD9-202ENST00000355500 ZNF496Q96IT1 587 aaPredicted RBP9.63□□□□□ -0.87
COMMD9-202ENST00000355500 ECHDC1Q9NTX5 307 aa9.63□□□□□ -0.87
COMMD9-202ENST00000355500 SGSM2O43147 1006 aa9.63□□□□□ -0.87
COMMD9-202ENST00000355500 GRIN3BO60391 1043 aa9.63□□□□□ -0.87
COMMD9-202ENST00000355500 ANKRD13DQ6ZTN6 518 aa9.63□□□□□ -0.87
COMMD9-202ENST00000355500 SLKQ9H2G2 1235 aaPredicted RBP9.63□□□□□ -0.87
COMMD9-202ENST00000355500 PUF60Q9UHX1 559 aaKnown RBP9.63□□□□□ -0.87
COMMD9-202ENST00000355500 CASP7P55210 303 aa9.62□□□□□ -0.87
COMMD9-202ENST00000355500 FAM182BQ5T319 152 aa9.62□□□□□ -0.87
COMMD9-202ENST00000355500 L1TD1Q5T7N2 865 aaKnown RBP9.62□□□□□ -0.87
COMMD9-202ENST00000355500 RIC3Q7Z5B4 369 aa9.62□□□□□ -0.87
COMMD9-202ENST00000355500 SREK1Q8WXA9 508 aaKnown RBP9.62□□□□□ -0.87
COMMD9-202ENST00000355500 KAZALD1Q96I82 304 aa9.62□□□□□ -0.87
COMMD9-202ENST00000355500 CALR3Q96L12 384 aaKnown RBP9.62□□□□□ -0.87
COMMD9-202ENST00000355500 TPX2Q9ULW0 747 aaKnown RBP9.62□□□□□ -0.87
COMMD9-202ENST00000355500 DLEC1Q9Y238 1755 aa9.62□□□□□ -0.87
COMMD9-202ENST00000355500 ARAP2Q8WZ64 1704 aa9.62□□□□□ -0.87
COMMD9-202ENST00000355500 WDHD1O75717 1129 aaPredicted RBP9.62□□□□□ -0.87
COMMD9-202ENST00000355500 ZRANB2O95218 330 aaKnown RBP eCLIP9.62□□□□□ -0.87
COMMD9-202ENST00000355500 SUCLG2Q96I99 432 aa9.62□□□□□ -0.87
COMMD9-202ENST00000355500 SYT17Q9BSW7 474 aa9.62□□□□□ -0.87
COMMD9-202ENST00000355500 TM6SF1Q9BZW5 370 aa9.62□□□□□ -0.87
COMMD9-202ENST00000355500 GNL3LQ9NVN8 582 aaKnown RBP9.62□□□□□ -0.87
COMMD9-202ENST00000355500 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.62□□□□□ -0.87
COMMD9-202ENST00000355500 ABCC12Q96J65 1359 aa9.62□□□□□ -0.87
COMMD9-202ENST00000355500 NRXN2Q9P2S2 1712 aa9.62□□□□□ -0.87
COMMD9-202ENST00000355500 PNPLA7Q6ZV29 1317 aa9.62□□□□□ -0.87
COMMD9-202ENST00000355500 TRIM28Q13263 835 aaKnown RBP9.62□□□□□ -0.87
COMMD9-202ENST00000355500 XAGE3Q8WTP9 111 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms