RNA–Protein interactions for RNA: ENST00000355360.8

PGBD2-202, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PGBD2, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-202ENST00000355360 CCDC191Q8NCU4 936 aa16.57■□□□□ 0.24
PGBD2-202ENST00000355360 CEP126Q9P2H0 1117 aa16.57■□□□□ 0.24
PGBD2-202ENST00000355360 LMTK3Q96Q04 1460 aa16.57■□□□□ 0.24
PGBD2-202ENST00000355360 LAMB4A4D0S4 1761 aa16.56■□□□□ 0.24
PGBD2-202ENST00000355360 PALLDQ8WX93 1383 aa16.56■□□□□ 0.24
PGBD2-202ENST00000355360 RNF113AO15541 343 aaKnown RBP16.56■□□□□ 0.24
PGBD2-202ENST00000355360 TAF7LQ5H9L4 462 aa16.56■□□□□ 0.24
PGBD2-202ENST00000355360 PUS7LQ9H0K6 701 aaKnown RBP16.56■□□□□ 0.24
PGBD2-202ENST00000355360 ALDH8A1Q9H2A2 487 aaPredicted RBP16.56■□□□□ 0.24
PGBD2-202ENST00000355360 KCPQ6ZWJ8 1503 aa16.56■□□□□ 0.24
PGBD2-202ENST00000355360 SNAP23O00161 211 aa16.56■□□□□ 0.24
PGBD2-202ENST00000355360 TTC39AQ5SRH9 613 aa16.56■□□□□ 0.24
PGBD2-202ENST00000355360 USP28Q96RU2 1077 aa16.56■□□□□ 0.24
PGBD2-202ENST00000355360 BCL11BQ9C0K0 894 aaPredicted RBP16.56■□□□□ 0.24
PGBD2-202ENST00000355360 NUP188Q5SRE5 1749 aa16.56■□□□□ 0.24
PGBD2-202ENST00000355360 PTGS1P23219 599 aa16.56■□□□□ 0.24
PGBD2-202ENST00000355360 MCM5P33992 734 aa16.56■□□□□ 0.24
PGBD2-202ENST00000355360 LRMPQ12912 555 aa16.56■□□□□ 0.24
PGBD2-202ENST00000355360 GOLPH3LQ9H4A5 285 aa16.56■□□□□ 0.24
PGBD2-202ENST00000355360 ELP1O95163 1332 aa16.55■□□□□ 0.24
PGBD2-202ENST00000355360 SYTL4Q96C24 671 aaPredicted RBP16.55■□□□□ 0.24
PGBD2-202ENST00000355360 PFKFB2O60825 505 aa16.55■□□□□ 0.24
PGBD2-202ENST00000355360 PDIA3P30101 505 aaKnown RBP16.55■□□□□ 0.24
PGBD2-202ENST00000355360 ADD1P35611 737 aaKnown RBP16.55■□□□□ 0.24
PGBD2-202ENST00000355360 EXOSC10Q01780 885 aaKnown RBP16.55■□□□□ 0.24
PGBD2-202ENST00000355360 FAM200AQ8TCP9 573 aa16.55■□□□□ 0.24
PGBD2-202ENST00000355360 TMOD3Q9NYL9 352 aa16.55■□□□□ 0.24
PGBD2-202ENST00000355360 COL5A2P05997 1499 aaPredicted RBP16.55■□□□□ 0.24
PGBD2-202ENST00000355360 ERVV-2B6SEH9 535 aa16.54■□□□□ 0.24
PGBD2-202ENST00000355360 RXRAP19793 462 aa16.54■□□□□ 0.24
PGBD2-202ENST00000355360 PIGBQ92521 554 aa16.54■□□□□ 0.24
PGBD2-202ENST00000355360 HELLSQ9NRZ9 838 aa16.54■□□□□ 0.24
PGBD2-202ENST00000355360 CPDO75976 1380 aa16.54■□□□□ 0.24
PGBD2-202ENST00000355360 HELBQ8NG08 1087 aaPredicted RBP16.54■□□□□ 0.24
PGBD2-202ENST00000355360 SMARCC2Q8TAQ2 1214 aa16.54■□□□□ 0.24
PGBD2-202ENST00000355360 PIBF1Q8WXW3 757 aa16.54■□□□□ 0.24
PGBD2-202ENST00000355360 POLR3DP05423 398 aaPredicted RBP16.53■□□□□ 0.24
PGBD2-202ENST00000355360 TCIRG1Q13488 830 aa16.53■□□□□ 0.24
PGBD2-202ENST00000355360 ILDR1Q86SU0 546 aaPredicted RBP16.53■□□□□ 0.24
PGBD2-202ENST00000355360 CLSTN2Q9H4D0 955 aa16.53■□□□□ 0.24
PGBD2-202ENST00000355360 GREM2Q9H772 168 aa16.53■□□□□ 0.24
PGBD2-202ENST00000355360 MYO5AQ9Y4I1 1855 aaKnown RBP16.53■□□□□ 0.24
PGBD2-202ENST00000355360 FGAP02671 866 aa16.53■□□□□ 0.24
PGBD2-202ENST00000355360 FDPSP14324 419 aaKnown RBP16.53■□□□□ 0.24
PGBD2-202ENST00000355360 DRC7Q8IY82 874 aa16.53■□□□□ 0.24
PGBD2-202ENST00000355360 DSCC1Q9BVC3 393 aa16.53■□□□□ 0.24
PGBD2-202ENST00000355360 ZNF335Q9H4Z2 1342 aaPredicted RBP16.53■□□□□ 0.24
PGBD2-202ENST00000355360 RRP9O43818 475 aaKnown RBP16.52■□□□□ 0.24
PGBD2-202ENST00000355360 C11orf57Q6ZUT1 292 aaPredicted RBP16.52■□□□□ 0.24
PGBD2-202ENST00000355360 ISCA1Q9BUE6 129 aa16.52■□□□□ 0.24
PGBD2-202ENST00000355360 INCENPQ9NQS7 918 aa16.52■□□□□ 0.24
PGBD2-202ENST00000355360 CCAR1Q8IX12 1150 aaKnown RBP16.52■□□□□ 0.24
PGBD2-202ENST00000355360 ZNF165P49910 485 aa16.52■□□□□ 0.23
PGBD2-202ENST00000355360 CCDC158Q5M9N0 1113 aa16.52■□□□□ 0.23
PGBD2-202ENST00000355360 CCDC186Q7Z3E2 898 aa16.52■□□□□ 0.23
PGBD2-202ENST00000355360 TRIM5Q9C035 493 aa16.52■□□□□ 0.23
PGBD2-202ENST00000355360 SLAIN2Q9P270 581 aa16.52■□□□□ 0.23
PGBD2-202ENST00000355360 SASS6Q6UVJ0 657 aa16.51■□□□□ 0.23
PGBD2-202ENST00000355360 STK11IPQ8N1F8 1099 aa16.51■□□□□ 0.23
PGBD2-202ENST00000355360 TBC1D2BQ9UPU7 963 aa16.51■□□□□ 0.23
PGBD2-202ENST00000355360 XIRP1Q702N8 1843 aaKnown RBP16.51■□□□□ 0.23
PGBD2-202ENST00000355360 NWD2Q9ULI1 1742 aa16.51■□□□□ 0.23
PGBD2-202ENST00000355360 MCAMP43121 646 aa16.51■□□□□ 0.23
PGBD2-202ENST00000355360 METTL24Q5JXM2 366 aa16.51■□□□□ 0.23
PGBD2-202ENST00000355360 CCDC144CPQ8IYA2 1237 aa16.51■□□□□ 0.23
PGBD2-202ENST00000355360 AIFM3Q96NN9 605 aa16.51■□□□□ 0.23
PGBD2-202ENST00000355360 SLC4A9Q96Q91 983 aa16.51■□□□□ 0.23
PGBD2-202ENST00000355360 UBR2Q8IWV8 1755 aa16.5■□□□□ 0.23
PGBD2-202ENST00000355360 ME1P48163 572 aa16.5■□□□□ 0.23
PGBD2-202ENST00000355360 IFIT5Q13325 482 aaKnown RBP16.5■□□□□ 0.23
PGBD2-202ENST00000355360 LDHAL6AQ6ZMR3 332 aa16.5■□□□□ 0.23
PGBD2-202ENST00000355360 ITGA6P23229 1130 aa16.5■□□□□ 0.23
PGBD2-202ENST00000355360 ARID5BQ14865 1188 aa16.5■□□□□ 0.23
PGBD2-202ENST00000355360 DDX19AQ9NUU7 478 aaKnown RBP16.5■□□□□ 0.23
PGBD2-202ENST00000355360 TOGARAM1Q9Y4F4 1720 aa16.49■□□□□ 0.23
PGBD2-202ENST00000355360 RFX7Q2KHR2 1363 aa16.49■□□□□ 0.23
PGBD2-202ENST00000355360 KLF18A0A0U1RQI7 1052 aa16.49■□□□□ 0.23
PGBD2-202ENST00000355360 CARD10Q9BWT7 1032 aa16.49■□□□□ 0.23
PGBD2-202ENST00000355360 SENP2Q9HC62 589 aa16.49■□□□□ 0.23
PGBD2-202ENST00000355360 ATG3Q9NT62 314 aa16.49■□□□□ 0.23
PGBD2-202ENST00000355360 CARMIL3Q8ND23 1372 aa16.49■□□□□ 0.23
PGBD2-202ENST00000355360 A0A1B0GVL5 298 aa16.49■□□□□ 0.23
PGBD2-202ENST00000355360 GPAA1O43292 621 aa16.49■□□□□ 0.23
PGBD2-202ENST00000355360 PRC1O43663 620 aa16.49■□□□□ 0.23
PGBD2-202ENST00000355360 GPR108Q9NPR9 543 aa16.49■□□□□ 0.23
PGBD2-202ENST00000355360 BTG4Q9NY30 223 aa16.49■□□□□ 0.23
PGBD2-202ENST00000355360 SHANK3Q9BYB0 1731 aa16.49■□□□□ 0.23
PGBD2-202ENST00000355360 PARP4Q9UKK3 1724 aaKnown RBP16.49■□□□□ 0.23
PGBD2-202ENST00000355360 DCCP43146 1447 aa16.49■□□□□ 0.23
PGBD2-202ENST00000355360 UBE2Q2LH0YL09 131 aa16.48■□□□□ 0.23
PGBD2-202ENST00000355360 IDH1O75874 414 aaKnown RBP16.48■□□□□ 0.23
PGBD2-202ENST00000355360 ANTXR2P58335 489 aa16.48■□□□□ 0.23
PGBD2-202ENST00000355360 KIF6Q6ZMV9 814 aa16.48■□□□□ 0.23
PGBD2-202ENST00000355360 ZBTB1Q9Y2K1 713 aa16.48■□□□□ 0.23
PGBD2-202ENST00000355360 GOLGA8BA8MQT2 603 aa16.48■□□□□ 0.23
PGBD2-202ENST00000355360 HMGB1P09429 215 aaKnown RBP16.48■□□□□ 0.23
PGBD2-202ENST00000355360 NKX1-1Q15270 411 aaPredicted RBP16.48■□□□□ 0.23
PGBD2-202ENST00000355360 ATP2B3Q16720 1220 aa16.48■□□□□ 0.23
PGBD2-202ENST00000355360 KIAA1524Q8TCG1 905 aa16.48■□□□□ 0.23
PGBD2-202ENST00000355360 CNNM1Q9NRU3 951 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms