RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 SLFNL1Q499Z3 407 aa26.27■■□□□ 1.8
NKX2-1-201ENST00000354822 CYP19A1P11511 503 aaPredicted RBP26.26■■□□□ 1.79
NKX2-1-201ENST00000354822 GIMAP6Q6P9H5 292 aa26.26■■□□□ 1.79
NKX2-1-201ENST00000354822 OSBP2Q969R2 916 aa26.26■■□□□ 1.79
NKX2-1-201ENST00000354822 ZNF274Q96GC6 653 aaPredicted RBP26.26■■□□□ 1.79
NKX2-1-201ENST00000354822 M0R2C6 588 aa26.26■■□□□ 1.79
NKX2-1-201ENST00000354822 ADORA1P30542 326 aa26.26■■□□□ 1.79
NKX2-1-201ENST00000354822 CFAP45Q9UL16 551 aa26.26■■□□□ 1.79
NKX2-1-201ENST00000354822 THRAP3Q9Y2W1 955 aaKnown RBP26.26■■□□□ 1.79
NKX2-1-201ENST00000354822 RIPOR2Q9Y4F9 1068 aa26.26■■□□□ 1.79
NKX2-1-201ENST00000354822 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.25■■□□□ 1.79
NKX2-1-201ENST00000354822 ADAMTS2O95450 1211 aa26.25■■□□□ 1.79
NKX2-1-201ENST00000354822 CCDC192P0DO97 292 aa26.25■■□□□ 1.79
NKX2-1-201ENST00000354822 HCLS1P14317 486 aaPredicted RBP26.25■■□□□ 1.79
NKX2-1-201ENST00000354822 NAA16Q6N069 864 aaPredicted RBP26.25■■□□□ 1.79
NKX2-1-201ENST00000354822 TTLL11Q8NHH1 800 aa26.25■■□□□ 1.79
NKX2-1-201ENST00000354822 LEO1Q8WVC0 666 aaPredicted RBP26.25■■□□□ 1.79
NKX2-1-201ENST00000354822 LRRC2Q9BYS8 371 aa26.25■■□□□ 1.79
NKX2-1-201ENST00000354822 ANKRD18BA2A2Z9 1011 aa26.24■■□□□ 1.79
NKX2-1-201ENST00000354822 RESTQ13127 1097 aa26.24■■□□□ 1.79
NKX2-1-201ENST00000354822 HLFQ16534 295 aa26.24■■□□□ 1.79
NKX2-1-201ENST00000354822 FAM173BQ6P4H8 233 aa26.24■■□□□ 1.79
NKX2-1-201ENST00000354822 LDHAL6AQ6ZMR3 332 aa26.24■■□□□ 1.79
NKX2-1-201ENST00000354822 ZNF512BQ96KM6 892 aaPredicted RBP26.24■■□□□ 1.79
NKX2-1-201ENST00000354822 SPATA31A1Q5TZJ5 1347 aa26.24■■□□□ 1.79
NKX2-1-201ENST00000354822 LAMA4Q16363 1823 aa26.24■■□□□ 1.79
NKX2-1-201ENST00000354822 ERVV-1B6SEH8 477 aa26.24■■□□□ 1.79
NKX2-1-201ENST00000354822 ATP2B3Q16720 1220 aa26.24■■□□□ 1.79
NKX2-1-201ENST00000354822 METTL24Q5JXM2 366 aa26.24■■□□□ 1.79
NKX2-1-201ENST00000354822 APPBP2Q92624 585 aa26.24■■□□□ 1.79
NKX2-1-201ENST00000354822 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.24■■□□□ 1.79
NKX2-1-201ENST00000354822 DOT1LQ8TEK3 1739 aa26.24■■□□□ 1.79
NKX2-1-201ENST00000354822 OFD1O75665 1012 aa26.23■■□□□ 1.79
NKX2-1-201ENST00000354822 ITGA6P23229 1130 aa26.23■■□□□ 1.79
NKX2-1-201ENST00000354822 CTSWP56202 376 aa26.23■■□□□ 1.79
NKX2-1-201ENST00000354822 WASHC4Q2M389 1173 aa26.23■■□□□ 1.79
NKX2-1-201ENST00000354822 NSUN7Q8NE18 718 aaKnown RBP26.23■■□□□ 1.79
NKX2-1-201ENST00000354822 CCDC85AQ96PX6 553 aaPredicted RBP26.23■■□□□ 1.79
NKX2-1-201ENST00000354822 PTMAP06454 111 aaKnown RBP26.23■■□□□ 1.79
NKX2-1-201ENST00000354822 IMMTQ16891 758 aaKnown RBP26.23■■□□□ 1.79
NKX2-1-201ENST00000354822 SLC4A9Q96Q91 983 aa26.23■■□□□ 1.79
NKX2-1-201ENST00000354822 NUP62CLQ9H1M0 184 aa26.23■■□□□ 1.79
NKX2-1-201ENST00000354822 DDX19AQ9NUU7 478 aaKnown RBP26.23■■□□□ 1.79
NKX2-1-201ENST00000354822 KAT6BQ8WYB5 2073 aa26.22■■□□□ 1.79
NKX2-1-201ENST00000354822 APOBRQ0VD83 1088 aa26.22■■□□□ 1.79
NKX2-1-201ENST00000354822 MAP3K11Q16584 847 aa26.22■■□□□ 1.79
NKX2-1-201ENST00000354822 ZSCAN25Q6NSZ9 544 aa26.22■■□□□ 1.79
NKX2-1-201ENST00000354822 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.22■■□□□ 1.79
NKX2-1-201ENST00000354822 TFIP11Q9UBB9 837 aaKnown RBP26.22■■□□□ 1.79
NKX2-1-201ENST00000354822 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.22■■□□□ 1.79
NKX2-1-201ENST00000354822 SYTL4Q96C24 671 aaPredicted RBP26.22■■□□□ 1.79
NKX2-1-201ENST00000354822 DDX11Q96FC9 970 aa26.22■■□□□ 1.79
NKX2-1-201ENST00000354822 IRS4O14654 1257 aaPredicted RBP26.21■■□□□ 1.79
NKX2-1-201ENST00000354822 KDM4AO75164 1064 aa26.21■■□□□ 1.79
NKX2-1-201ENST00000354822 GPTP24298 496 aa26.21■■□□□ 1.79
NKX2-1-201ENST00000354822 IL6STP40189 918 aaPredicted RBP26.21■■□□□ 1.79
NKX2-1-201ENST00000354822 ZAP70P43403 619 aa26.21■■□□□ 1.79
NKX2-1-201ENST00000354822 EVCP57679 992 aa26.21■■□□□ 1.79
NKX2-1-201ENST00000354822 ATL3Q6DD88 541 aa26.2■■□□□ 1.79
NKX2-1-201ENST00000354822 GREM2Q9H772 168 aa26.2■■□□□ 1.79
NKX2-1-201ENST00000354822 CNNM1Q9NRU3 951 aa26.2■■□□□ 1.79
NKX2-1-201ENST00000354822 TRMT112Q9UI30 125 aaKnown RBP26.2■■□□□ 1.79
NKX2-1-201ENST00000354822 PDE8AO60658 829 aa26.2■■□□□ 1.78
NKX2-1-201ENST00000354822 PDIA3P30101 505 aaKnown RBP26.2■■□□□ 1.78
NKX2-1-201ENST00000354822 TTF1Q15361 905 aaPredicted RBP26.2■■□□□ 1.78
NKX2-1-201ENST00000354822 PTPDC1A2A3K4 754 aa26.19■■□□□ 1.78
NKX2-1-201ENST00000354822 LIG1P18858 919 aa26.19■■□□□ 1.78
NKX2-1-201ENST00000354822 AK7Q96M32 723 aa26.19■■□□□ 1.78
NKX2-1-201ENST00000354822 USP25Q9UHP3 1055 aa26.19■■□□□ 1.78
NKX2-1-201ENST00000354822 RIC1Q4ADV7 1423 aa26.19■■□□□ 1.78
NKX2-1-201ENST00000354822 CTDNEP1O95476 244 aa26.19■■□□□ 1.78
NKX2-1-201ENST00000354822 SCARF1Q14162 830 aa26.19■■□□□ 1.78
NKX2-1-201ENST00000354822 DDB1Q16531 1140 aa26.19■■□□□ 1.78
NKX2-1-201ENST00000354822 ADCY5O95622 1261 aa26.18■■□□□ 1.78
NKX2-1-201ENST00000354822 SYNE4Q8N205 404 aa26.18■■□□□ 1.78
NKX2-1-201ENST00000354822 ZBTB1Q9Y2K1 713 aa26.18■■□□□ 1.78
NKX2-1-201ENST00000354822 NWD2Q9ULI1 1742 aa26.18■■□□□ 1.78
NKX2-1-201ENST00000354822 FGAP02671 866 aa26.17■■□□□ 1.78
NKX2-1-201ENST00000354822 TTLL5Q6EMB2 1281 aa26.17■■□□□ 1.78
NKX2-1-201ENST00000354822 ANKRD36CQ5JPF3 1778 aa26.17■■□□□ 1.78
NKX2-1-201ENST00000354822 TNMDQ9H2S6 317 aa26.17■■□□□ 1.78
NKX2-1-201ENST00000354822 DACT1Q9NYF0 836 aa26.17■■□□□ 1.78
NKX2-1-201ENST00000354822 SALL1Q9NSC2 1324 aa26.17■■□□□ 1.78
NKX2-1-201ENST00000354822 A0A0G2JLW4 131 aa26.16■■□□□ 1.78
NKX2-1-201ENST00000354822 DZIP3Q86Y13 1208 aaKnown RBP26.16■■□□□ 1.78
NKX2-1-201ENST00000354822 SPATA31A5Q5VU36 1347 aa26.16■■□□□ 1.78
NKX2-1-201ENST00000354822 SPATA31A7Q8IWB4 1347 aa26.16■■□□□ 1.78
NKX2-1-201ENST00000354822 PDE8BO95263 885 aa26.16■■□□□ 1.78
NKX2-1-201ENST00000354822 CCT2P78371 535 aaKnown RBP26.16■■□□□ 1.78
NKX2-1-201ENST00000354822 VGLL2Q8N8G2 317 aa26.16■■□□□ 1.78
NKX2-1-201ENST00000354822 WDR19Q8NEZ3 1342 aa26.15■■□□□ 1.78
NKX2-1-201ENST00000354822 NUTM2BA6NNL0 878 aaPredicted RBP26.15■■□□□ 1.78
NKX2-1-201ENST00000354822 NUTM2EB1AL46 878 aaPredicted RBP26.15■■□□□ 1.78
NKX2-1-201ENST00000354822 TOM1O60784 492 aa26.15■■□□□ 1.78
NKX2-1-201ENST00000354822 RBM43Q6ZSC3 357 aaKnown RBP26.15■■□□□ 1.78
NKX2-1-201ENST00000354822 NUTM2AQ8IVF1 878 aaPredicted RBP26.15■■□□□ 1.78
NKX2-1-201ENST00000354822 PUS7LQ9H0K6 701 aaKnown RBP26.15■■□□□ 1.78
NKX2-1-201ENST00000354822 FOXP2O15409 715 aa26.14■■□□□ 1.78
NKX2-1-201ENST00000354822 DHX16O60231 1041 aaKnown RBP26.14■■□□□ 1.78
NKX2-1-201ENST00000354822 MCAMP43121 646 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms