RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 BORCS6Q96GS4 357 aa12.73□□□□□ -0.37
SND1-201ENST00000354725 LRRCC1Q9C099 1032 aa12.73□□□□□ -0.37
SND1-201ENST00000354725 RBM28Q9NW13 759 aaKnown RBP12.73□□□□□ -0.37
SND1-201ENST00000354725 MYH15Q9Y2K3 1946 aa12.73□□□□□ -0.37
SND1-201ENST00000354725 PLSCR1O15162 318 aa12.73□□□□□ -0.37
SND1-201ENST00000354725 MBD3O95983 291 aa12.73□□□□□ -0.37
SND1-201ENST00000354725 CYP2C19P33261 490 aa12.73□□□□□ -0.37
SND1-201ENST00000354725 HSPA4P34932 840 aa12.73□□□□□ -0.37
SND1-201ENST00000354725 NAP1L1P55209 391 aaKnown RBP12.73□□□□□ -0.37
SND1-201ENST00000354725 ZNF280DQ6N043 979 aa12.73□□□□□ -0.37
SND1-201ENST00000354725 MNS1Q8NEH6 495 aa12.73□□□□□ -0.37
SND1-201ENST00000354725 SLC52A2Q9HAB3 445 aa12.73□□□□□ -0.37
SND1-201ENST00000354725 CTDP1Q9Y5B0 961 aaPredicted RBP12.73□□□□□ -0.37
SND1-201ENST00000354725 F6X3S4 739 aa12.72□□□□□ -0.37
SND1-201ENST00000354725 RIOK3O14730 519 aaKnown RBP12.72□□□□□ -0.37
SND1-201ENST00000354725 FLIIQ13045 1269 aa12.72□□□□□ -0.37
SND1-201ENST00000354725 NBPF5PQ86XG9 351 aaPredicted RBP12.72□□□□□ -0.37
SND1-201ENST00000354725 TTC14Q96N46 770 aa12.72□□□□□ -0.37
SND1-201ENST00000354725 PRPF40AO75400 957 aaKnown RBP12.72□□□□□ -0.37
SND1-201ENST00000354725 CAPN15O75808 1086 aa12.72□□□□□ -0.37
SND1-201ENST00000354725 FKBP5Q13451 457 aaPredicted RBP12.72□□□□□ -0.37
SND1-201ENST00000354725 PI4K2BQ8TCG2 481 aa12.72□□□□□ -0.37
SND1-201ENST00000354725 GNAI3P08754 354 aa12.72□□□□□ -0.37
SND1-201ENST00000354725 MPRIPQ6WCQ1 1025 aa12.72□□□□□ -0.37
SND1-201ENST00000354725 USP44Q9H0E7 712 aa12.72□□□□□ -0.37
SND1-201ENST00000354725 DIAPH3Q9NSV4 1193 aa12.72□□□□□ -0.37
SND1-201ENST00000354725 BCORQ6W2J9 1755 aa12.72□□□□□ -0.37
SND1-201ENST00000354725 SLC4A9Q96Q91 983 aa12.71□□□□□ -0.37
SND1-201ENST00000354725 TSPYL4Q9UJ04 414 aa12.71□□□□□ -0.37
SND1-201ENST00000354725 JRKLQ9Y4A0 524 aa12.71□□□□□ -0.37
SND1-201ENST00000354725 ACRBPQ8NEB7 543 aa12.71□□□□□ -0.37
SND1-201ENST00000354725 MICAL1Q8TDZ2 1067 aa12.71□□□□□ -0.37
SND1-201ENST00000354725 KCNB2Q92953 911 aa12.71□□□□□ -0.37
SND1-201ENST00000354725 ATG3Q9NT62 314 aa12.71□□□□□ -0.37
SND1-201ENST00000354725 TRIM37O94972 964 aa12.71□□□□□ -0.38
SND1-201ENST00000354725 MAP4K4O95819 1239 aaPredicted RBP12.71□□□□□ -0.38
SND1-201ENST00000354725 NME8Q8N427 588 aa12.71□□□□□ -0.38
SND1-201ENST00000354725 KIF18AQ8NI77 898 aa12.71□□□□□ -0.38
SND1-201ENST00000354725 DRC1Q96MC2 740 aa12.71□□□□□ -0.38
SND1-201ENST00000354725 GOLGA6L6A8MZA4 724 aa12.7□□□□□ -0.38
SND1-201ENST00000354725 MYBPC2Q14324 1141 aa12.7□□□□□ -0.38
SND1-201ENST00000354725 MIS18AQ9NYP9 233 aa12.7□□□□□ -0.38
SND1-201ENST00000354725 PES1O00541 588 aaKnown RBP12.7□□□□□ -0.38
SND1-201ENST00000354725 SOCS7O14512 581 aa12.7□□□□□ -0.38
SND1-201ENST00000354725 NCBP1Q09161 790 aaKnown RBP12.7□□□□□ -0.38
SND1-201ENST00000354725 CHAMP1Q96JM3 812 aa12.7□□□□□ -0.38
SND1-201ENST00000354725 EXOC6BQ9Y2D4 811 aa12.7□□□□□ -0.38
SND1-201ENST00000354725 TESPA1A2RU30 521 aaPredicted RBP12.7□□□□□ -0.38
SND1-201ENST00000354725 NEK4P51957 841 aa12.7□□□□□ -0.38
SND1-201ENST00000354725 ZKSCAN8Q15776 578 aaPredicted RBP12.7□□□□□ -0.38
SND1-201ENST00000354725 C10orf67Q8IYJ2 551 aa12.7□□□□□ -0.38
SND1-201ENST00000354725 RPS6KL1Q9Y6S9 549 aa12.7□□□□□ -0.38
SND1-201ENST00000354725 CCDC30Q5VVM6 783 aa12.69□□□□□ -0.38
SND1-201ENST00000354725 ACSBG1Q96GR2 724 aa12.69□□□□□ -0.38
SND1-201ENST00000354725 SPTLC3Q9NUV7 552 aa12.69□□□□□ -0.38
SND1-201ENST00000354725 BSDC1Q9NW68 430 aaPredicted RBP12.69□□□□□ -0.38
SND1-201ENST00000354725 LRCH2Q5VUJ6 765 aa12.69□□□□□ -0.38
SND1-201ENST00000354725 FAM212AQ96EL1 285 aa12.69□□□□□ -0.38
SND1-201ENST00000354725 NOL10Q9BSC4 688 aaKnown RBP12.69□□□□□ -0.38
SND1-201ENST00000354725 SYCP1Q15431 976 aa12.68□□□□□ -0.38
SND1-201ENST00000354725 TSGA10IPQ3SY00 556 aa12.68□□□□□ -0.38
SND1-201ENST00000354725 ZNF446Q9NWS9 450 aa12.68□□□□□ -0.38
SND1-201ENST00000354725 TRIM66O15016 1216 aa12.68□□□□□ -0.38
SND1-201ENST00000354725 LMNB1P20700 586 aa12.68□□□□□ -0.38
SND1-201ENST00000354725 C1orf141Q5JVX7 400 aa12.68□□□□□ -0.38
SND1-201ENST00000354725 NFATC2IPQ8NCF5 419 aa12.68□□□□□ -0.38
SND1-201ENST00000354725 MYO1CO00159 1063 aa12.68□□□□□ -0.38
SND1-201ENST00000354725 PPP1R12AO14974 1030 aaPredicted RBP12.68□□□□□ -0.38
SND1-201ENST00000354725 RAB11FIP3O75154 756 aa12.68□□□□□ -0.38
SND1-201ENST00000354725 GSCP56915 257 aaPredicted RBP12.68□□□□□ -0.38
SND1-201ENST00000354725 SART3Q15020 963 aaKnown RBP12.68□□□□□ -0.38
SND1-201ENST00000354725 SF3A1Q15459 793 aaKnown RBP12.68□□□□□ -0.38
SND1-201ENST00000354725 TSHZ3Q63HK5 1081 aa12.68□□□□□ -0.38
SND1-201ENST00000354725 LSG1Q9H089 658 aaKnown RBP12.68□□□□□ -0.38
SND1-201ENST00000354725 LRRC4BQ9NT99 713 aa12.68□□□□□ -0.38
SND1-201ENST00000354725 SCN7AQ01118 1682 aa12.67□□□□□ -0.38
SND1-201ENST00000354725 HOXB7P09629 217 aa12.67□□□□□ -0.38
SND1-201ENST00000354725 CHAF1AQ13111 956 aaPredicted RBP12.67□□□□□ -0.38
SND1-201ENST00000354725 CCDC91Q7Z6B0 441 aa12.67□□□□□ -0.38
SND1-201ENST00000354725 SYCE3A1L190 88 aa12.67□□□□□ -0.38
SND1-201ENST00000354725 SGSM2O43147 1006 aa12.67□□□□□ -0.38
SND1-201ENST00000354725 MTX1Q13505 466 aa12.67□□□□□ -0.38
SND1-201ENST00000354725 MUM1L1Q5H9M0 696 aa12.67□□□□□ -0.38
SND1-201ENST00000354725 SNRKQ9NRH2 765 aa12.67□□□□□ -0.38
SND1-201ENST00000354725 ASAP1Q9ULH1 1129 aa12.67□□□□□ -0.38
SND1-201ENST00000354725 MTA3Q9BTC8 594 aa12.67□□□□□ -0.38
SND1-201ENST00000354725 FUCA2Q9BTY2 467 aa12.67□□□□□ -0.38
SND1-201ENST00000354725 FAM53CQ9NYF3 392 aa12.67□□□□□ -0.38
SND1-201ENST00000354725 PALLDQ8WX93 1383 aa12.66□□□□□ -0.38
SND1-201ENST00000354725 ATP2B1P20020 1258 aa12.66□□□□□ -0.38
SND1-201ENST00000354725 BIRC2Q13490 618 aa12.66□□□□□ -0.38
SND1-201ENST00000354725 SYT10Q6XYQ8 523 aa12.66□□□□□ -0.38
SND1-201ENST00000354725 BIN2Q9UBW5 565 aaPredicted RBP12.66□□□□□ -0.38
SND1-201ENST00000354725 LRRFIP2Q9Y608 721 aaKnown RBP12.66□□□□□ -0.38
SND1-201ENST00000354725 CCT2P78371 535 aaKnown RBP12.66□□□□□ -0.38
SND1-201ENST00000354725 ARHGEF1Q92888 912 aaKnown RBP12.65□□□□□ -0.38
SND1-201ENST00000354725 DDX60Q8IY21 1712 aaKnown RBP12.65□□□□□ -0.38
SND1-201ENST00000354725 A0A0G2JS52 829 aa12.65□□□□□ -0.38
SND1-201ENST00000354725 RTF1Q92541 710 aaKnown RBP12.65□□□□□ -0.38
SND1-201ENST00000354725 UVSSAQ2YD98 709 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms