RNA–Protein interactions for RNA: ENST00000354636.7

HMGA2-201, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-201ENST00000354636 C16orf71Q8IYS4 520 aaPredicted RBP29.81■■■□□ 2.36
HMGA2-201ENST00000354636 NEUROD6Q96NK8 337 aa29.81■■■□□ 2.36
HMGA2-201ENST00000354636 PSMD1Q99460 953 aa29.81■■■□□ 2.36
HMGA2-201ENST00000354636 CCDC8Q9H0W5 538 aaPredicted RBP29.81■■■□□ 2.36
HMGA2-201ENST00000354636 ARAP2Q8WZ64 1704 aa29.79■■■□□ 2.36
HMGA2-201ENST00000354636 YBX3P16989 372 aaKnown RBP eCLIP29.79■■■□□ 2.36
HMGA2-201ENST00000354636 C15orf52Q6ZUT6 534 aaKnown RBP29.79■■■□□ 2.36
HMGA2-201ENST00000354636 XAGE2Q96GT9 111 aa29.79■■■□□ 2.36
HMGA2-201ENST00000354636 DBNLQ9UJU6 430 aaKnown RBP29.79■■■□□ 2.36
HMGA2-201ENST00000354636 IFIT2P09913 472 aaKnown RBP29.78■■■□□ 2.36
HMGA2-201ENST00000354636 FKBP4Q02790 459 aaKnown RBP eCLIP29.78■■■□□ 2.363e-6■■□□□ 13
HMGA2-201ENST00000354636 SUPT20HQ8NEM7 779 aa29.78■■■□□ 2.36
HMGA2-201ENST00000354636 GPR101Q96P66 508 aaPredicted RBP29.78■■■□□ 2.36
HMGA2-201ENST00000354636 DBNDD2Q9BQY9 259 aa29.78■■■□□ 2.36
HMGA2-201ENST00000354636 TLR7Q9NYK1 1049 aaKnown RBP29.78■■■□□ 2.36
HMGA2-201ENST00000354636 KLRK1P26718 216 aa29.77■■■□□ 2.36
HMGA2-201ENST00000354636 ADORA1P30542 326 aa29.77■■■□□ 2.36
HMGA2-201ENST00000354636 MED23Q9ULK4 1368 aa29.77■■■□□ 2.36
HMGA2-201ENST00000354636 NFKBIEO00221 500 aa29.76■■■□□ 2.36
HMGA2-201ENST00000354636 ARHGAP27Q6ZUM4 889 aa29.76■■■□□ 2.36
HMGA2-201ENST00000354636 TXNRD3Q86VQ6 643 aa29.76■■■□□ 2.36
HMGA2-201ENST00000354636 OTUD7AQ8TE49 926 aaPredicted RBP29.76■■■□□ 2.35
HMGA2-201ENST00000354636 EYA3Q99504 573 aa29.76■■■□□ 2.35
HMGA2-201ENST00000354636 SALL3Q9BXA9 1300 aa29.75■■■□□ 2.35
HMGA2-201ENST00000354636 PDE4AP27815 886 aa29.75■■■□□ 2.35
HMGA2-201ENST00000354636 WASHC4Q2M389 1173 aa29.75■■■□□ 2.35
HMGA2-201ENST00000354636 TAOK3Q9H2K8 898 aa29.75■■■□□ 2.35
HMGA2-201ENST00000354636 LTBP3Q9NS15 1303 aa29.74■■■□□ 2.35
HMGA2-201ENST00000354636 FAM84BQ96KN1 310 aaPredicted RBP29.74■■■□□ 2.35
HMGA2-201ENST00000354636 ZC3H12CQ9C0D7 883 aaKnown RBP29.74■■■□□ 2.35
HMGA2-201ENST00000354636 UTRNP46939 3433 aa29.74■■■□□ 2.35
HMGA2-201ENST00000354636 GYG1P46976 350 aa29.72■■■□□ 2.35
HMGA2-201ENST00000354636 CAVIN4Q5BKX8 364 aa29.72■■■□□ 2.35
HMGA2-201ENST00000354636 FBXO33Q7Z6M2 555 aa29.72■■■□□ 2.35
HMGA2-201ENST00000354636 VPS33BQ9H267 617 aa29.72■■■□□ 2.35
HMGA2-201ENST00000354636 RIMBP2O15034 1052 aa29.71■■■□□ 2.35
HMGA2-201ENST00000354636 BCAMP50895 628 aa29.71■■■□□ 2.35
HMGA2-201ENST00000354636 GORABQ5T7V8 394 aa29.71■■■□□ 2.35
HMGA2-201ENST00000354636 CCDC102BQ68D86 513 aa29.71■■■□□ 2.35
HMGA2-201ENST00000354636 KIAA2012Q0VF49 1180 aa29.71■■■□□ 2.35
HMGA2-201ENST00000354636 ZNF277Q9NRM2 450 aaPredicted RBP29.71■■■□□ 2.35
HMGA2-201ENST00000354636 MX1P20591 662 aa29.7■■■□□ 2.34
HMGA2-201ENST00000354636 HIBADHP31937 336 aaKnown RBP29.7■■■□□ 2.34
HMGA2-201ENST00000354636 PHKA1P46020 1223 aa29.7■■■□□ 2.34
HMGA2-201ENST00000354636 CCDC158Q5M9N0 1113 aa29.7■■■□□ 2.34
HMGA2-201ENST00000354636 SKAP1Q86WV1 359 aa29.7■■■□□ 2.34
HMGA2-201ENST00000354636 PLEKHM2Q8IWE5 1019 aa29.7■■■□□ 2.34
HMGA2-201ENST00000354636 RASSF7Q02833 373 aa29.69■■■□□ 2.34
HMGA2-201ENST00000354636 AOC3Q16853 763 aa29.69■■■□□ 2.34
HMGA2-201ENST00000354636 STAP2Q9UGK3 403 aa29.69■■■□□ 2.34
HMGA2-201ENST00000354636 DCAF8L1A6NGE4 600 aa29.68■■■□□ 2.34
HMGA2-201ENST00000354636 PPIP5K2O43314 1243 aa29.68■■■□□ 2.34
HMGA2-201ENST00000354636 GRIN3BO60391 1043 aa29.68■■■□□ 2.34
HMGA2-201ENST00000354636 PDE1AP54750 535 aa29.68■■■□□ 2.34
HMGA2-201ENST00000354636 ZNF804AQ7Z570 1209 aa29.68■■■□□ 2.34
HMGA2-201ENST00000354636 ECHDC1Q9NTX5 307 aa29.68■■■□□ 2.34
HMGA2-201ENST00000354636 IARSP41252 1262 aaKnown RBP29.67■■■□□ 2.34
HMGA2-201ENST00000354636 VPS37DQ86XT2 251 aa29.67■■■□□ 2.34
HMGA2-201ENST00000354636 ZNF512BQ96KM6 892 aaPredicted RBP29.67■■■□□ 2.34
HMGA2-201ENST00000354636 TTC41PQ6P2S7 1318 aa29.67■■■□□ 2.34
HMGA2-201ENST00000354636 G3V3G9 751 aa29.66■■■□□ 2.34
HMGA2-201ENST00000354636 DCAF8Q5TAQ9 597 aa29.66■■■□□ 2.34
HMGA2-201ENST00000354636 GPATCH3Q96I76 525 aa29.66■■■□□ 2.34
HMGA2-201ENST00000354636 COA1Q9GZY4 146 aa29.66■■■□□ 2.34
HMGA2-201ENST00000354636 OSBPL3Q9H4L5 887 aa29.66■■■□□ 2.34
HMGA2-201ENST00000354636 CD209Q9NNX6 404 aa29.66■■■□□ 2.34
HMGA2-201ENST00000354636 ARID4AP29374 1257 aaPredicted RBP29.66■■■□□ 2.34
HMGA2-201ENST00000354636 PRELPP51888 382 aa29.66■■■□□ 2.34
HMGA2-201ENST00000354636 TTC39AQ5SRH9 613 aa29.66■■■□□ 2.34
HMGA2-201ENST00000354636 ZBTB22O15209 634 aa29.65■■■□□ 2.34
HMGA2-201ENST00000354636 TSHZ3Q63HK5 1081 aa29.65■■■□□ 2.34
HMGA2-201ENST00000354636 UQCRFS1P1P0C7P4 283 aa29.64■■■□□ 2.34
HMGA2-201ENST00000354636 IL1R1P14778 569 aa29.64■■■□□ 2.34
HMGA2-201ENST00000354636 ATP5JP18859 108 aa29.64■■■□□ 2.34
HMGA2-201ENST00000354636 DOK7Q18PE1 504 aa29.64■■■□□ 2.34
HMGA2-201ENST00000354636 LARGE2Q8N3Y3 721 aa29.64■■■□□ 2.34
HMGA2-201ENST00000354636 TDRD7Q8NHU6 1098 aaKnown RBP29.64■■■□□ 2.34
HMGA2-201ENST00000354636 GNL3LQ9NVN8 582 aaKnown RBP29.64■■■□□ 2.34
HMGA2-201ENST00000354636 PI4K2BQ8TCG2 481 aa29.63■■■□□ 2.33
HMGA2-201ENST00000354636 COL4A5P29400 1685 aa29.62■■■□□ 2.33
HMGA2-201ENST00000354636 AOX1Q06278 1338 aa29.62■■■□□ 2.33
HMGA2-201ENST00000354636 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.62■■■□□ 2.33
HMGA2-201ENST00000354636 DBNDD1Q9H9R9 158 aa29.62■■■□□ 2.33
HMGA2-201ENST00000354636 SCARF1Q14162 830 aa29.61■■■□□ 2.33
HMGA2-201ENST00000354636 PODNQ7Z5L7 613 aa29.61■■■□□ 2.33
HMGA2-201ENST00000354636 IQSEC3Q9UPP2 1182 aaPredicted RBP29.61■■■□□ 2.33
HMGA2-201ENST00000354636 CCDC88AQ3V6T2 1871 aa29.61■■■□□ 2.33
HMGA2-201ENST00000354636 SEMA3EO15041 775 aa29.61■■■□□ 2.33
HMGA2-201ENST00000354636 ERC2O15083 957 aa29.61■■■□□ 2.33
HMGA2-201ENST00000354636 GLRX3O76003 335 aaKnown RBP29.61■■■□□ 2.33
HMGA2-201ENST00000354636 MCAMP43121 646 aa29.61■■■□□ 2.33
HMGA2-201ENST00000354636 RGS3P49796 1198 aa29.61■■■□□ 2.33
HMGA2-201ENST00000354636 RASGRF1Q13972 1273 aa29.61■■■□□ 2.33
HMGA2-201ENST00000354636 SBF1O95248 1867 aa29.6■■■□□ 2.33
HMGA2-201ENST00000354636 ECE2O60344 883 aa29.6■■■□□ 2.33
HMGA2-201ENST00000354636 LMNB1P20700 586 aa29.6■■■□□ 2.33
HMGA2-201ENST00000354636 BOLA2Q9H3K6 86 aa29.59■■■□□ 2.33
HMGA2-201ENST00000354636 HMG20BQ9P0W2 317 aa29.59■■■□□ 2.33
HMGA2-201ENST00000354636 CHD4Q14839 1912 aa29.59■■■□□ 2.33
HMGA2-201ENST00000354636 AKAP11Q9UKA4 1901 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms