RNA–Protein interactions for RNA: ENST00000354473.4

VPS72-201, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 3

Gene VPS72, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-201ENST00000354473 LRRC24Q50LG9 513 aa23.53■■□□□ 1.36
VPS72-201ENST00000354473 DZIP1LQ8IYY4 767 aaKnown RBP23.53■■□□□ 1.36
VPS72-201ENST00000354473 DPF2Q92785 391 aa23.53■■□□□ 1.36
VPS72-201ENST00000354473 ADARB2Q9NS39 739 aaKnown RBP23.53■■□□□ 1.36
VPS72-201ENST00000354473 SHTN1A0MZ66 631 aa23.52■■□□□ 1.36
VPS72-201ENST00000354473 USP17L3A6NCW0 530 aa23.52■■□□□ 1.36
VPS72-201ENST00000354473 USP17L4A6NCW7 530 aa23.52■■□□□ 1.36
VPS72-201ENST00000354473 VIL1P09327 827 aaKnown RBP23.52■■□□□ 1.36
VPS72-201ENST00000354473 USP50Q70EL3 339 aaPredicted RBP23.52■■□□□ 1.36
VPS72-201ENST00000354473 USP17L1Q7RTZ2 530 aa23.52■■□□□ 1.36
VPS72-201ENST00000354473 MICALL2Q8IY33 904 aa23.52■■□□□ 1.36
VPS72-201ENST00000354473 CNOT7Q9UIV1 285 aaKnown RBP23.52■■□□□ 1.36
VPS72-201ENST00000354473 ZNF646O15015 1829 aaPredicted RBP23.52■■□□□ 1.36
VPS72-201ENST00000354473 APLP1P51693 650 aa23.51■■□□□ 1.35
VPS72-201ENST00000354473 METTL24Q5JXM2 366 aa23.51■■□□□ 1.35
VPS72-201ENST00000354473 C15orf52Q6ZUT6 534 aaKnown RBP23.51■■□□□ 1.35
VPS72-201ENST00000354473 RLBP1P12271 317 aa23.5■■□□□ 1.35
VPS72-201ENST00000354473 PTPN12Q05209 780 aaKnown RBP23.5■■□□□ 1.35
VPS72-201ENST00000354473 RSBN1LQ6PCB5 846 aaPredicted RBP23.5■■□□□ 1.35
VPS72-201ENST00000354473 FBXW7Q969H0 707 aa23.5■■□□□ 1.35
VPS72-201ENST00000354473 RCAN3Q9UKA8 241 aa23.5■■□□□ 1.35
VPS72-201ENST00000354473 H7C1D1 291 aa23.49■■□□□ 1.35
VPS72-201ENST00000354473 ZNF804AQ7Z570 1209 aa23.49■■□□□ 1.35
VPS72-201ENST00000354473 ITPRIPQ8IWB1 547 aa23.49■■□□□ 1.35
VPS72-201ENST00000354473 ZNF609O15014 1411 aa23.49■■□□□ 1.35
VPS72-201ENST00000354473 EYA2O00167 538 aa23.48■■□□□ 1.35
VPS72-201ENST00000354473 GNAI2P04899 355 aa23.48■■□□□ 1.35
VPS72-201ENST00000354473 UBE4AQ14139 1066 aa23.48■■□□□ 1.35
VPS72-201ENST00000354473 MAP1SQ66K74 1059 aaPredicted RBP23.48■■□□□ 1.35
VPS72-201ENST00000354473 TRPM4Q8TD43 1214 aa23.48■■□□□ 1.35
VPS72-201ENST00000354473 CD209Q9NNX6 404 aa23.48■■□□□ 1.35
VPS72-201ENST00000354473 AGBL3Q8NEM8 1001 aa23.47■■□□□ 1.35
VPS72-201ENST00000354473 SIL1Q9H173 461 aa23.47■■□□□ 1.35
VPS72-201ENST00000354473 DACT2Q5SW24 774 aa23.46■■□□□ 1.35
VPS72-201ENST00000354473 STRIP1Q5VSL9 837 aa23.46■■□□□ 1.35
VPS72-201ENST00000354473 VGLL2Q8N8G2 317 aa23.46■■□□□ 1.35
VPS72-201ENST00000354473 YTHDC1Q96MU7 727 aaKnown RBP23.46■■□□□ 1.35
VPS72-201ENST00000354473 SRGAP3O43295 1099 aa23.45■■□□□ 1.34
VPS72-201ENST00000354473 PDE8BO95263 885 aa23.45■■□□□ 1.34
VPS72-201ENST00000354473 HIRAP54198 1017 aaPredicted RBP23.45■■□□□ 1.34
VPS72-201ENST00000354473 MTX1Q13505 466 aa23.45■■□□□ 1.34
VPS72-201ENST00000354473 SAMD7Q7Z3H4 446 aa23.45■■□□□ 1.34
VPS72-201ENST00000354473 CNTROBQ8N137 903 aa23.45■■□□□ 1.34
VPS72-201ENST00000354473 PANK1Q8TE04 598 aa23.45■■□□□ 1.34
VPS72-201ENST00000354473 GMLQ99445 158 aa23.45■■□□□ 1.34
VPS72-201ENST00000354473 MXD3Q9BW11 206 aa23.45■■□□□ 1.34
VPS72-201ENST00000354473 PA2G4Q9UQ80 394 aaKnown RBP23.45■■□□□ 1.34
VPS72-201ENST00000354473 ITGBL1O95965 494 aaPredicted RBP23.44■■□□□ 1.34
VPS72-201ENST00000354473 GTF2IP78347 998 aa23.44■■□□□ 1.34
VPS72-201ENST00000354473 HTRA3P83110 453 aa23.44■■□□□ 1.34
VPS72-201ENST00000354473 TBC1D10BQ4KMP7 808 aaPredicted RBP23.44■■□□□ 1.34
VPS72-201ENST00000354473 TTLL5Q6EMB2 1281 aa23.44■■□□□ 1.34
VPS72-201ENST00000354473 ATG9AQ7Z3C6 839 aa23.44■■□□□ 1.34
VPS72-201ENST00000354473 PASKQ96RG2 1323 aa23.44■■□□□ 1.34
VPS72-201ENST00000354473 CIAO1O76071 339 aa23.43■■□□□ 1.34
VPS72-201ENST00000354473 EGFRP00533 1210 aa23.43■■□□□ 1.34
VPS72-201ENST00000354473 IL1R1P14778 569 aa23.43■■□□□ 1.34
VPS72-201ENST00000354473 GYG1P46976 350 aa23.43■■□□□ 1.34
VPS72-201ENST00000354473 FBXO3Q9UK99 471 aa23.43■■□□□ 1.34
VPS72-201ENST00000354473 MYO3BQ8WXR4 1341 aa23.43■■□□□ 1.34
VPS72-201ENST00000354473 USP17L8P0C7I0 530 aa23.42■■□□□ 1.34
VPS72-201ENST00000354473 PUM3Q15397 648 aaKnown RBP23.42■■□□□ 1.34
VPS72-201ENST00000354473 KIF4BQ2VIQ3 1234 aa23.42■■□□□ 1.34
VPS72-201ENST00000354473 RBM26Q5T8P6 1007 aaKnown RBP23.42■■□□□ 1.34
VPS72-201ENST00000354473 COPRSQ9NQ92 184 aa23.42■■□□□ 1.34
VPS72-201ENST00000354473 MS4A1P11836 297 aa23.41■■□□□ 1.34
VPS72-201ENST00000354473 HIBADHP31937 336 aaKnown RBP23.41■■□□□ 1.34
VPS72-201ENST00000354473 ZNF280AP59817 542 aaPredicted RBP23.41■■□□□ 1.34
VPS72-201ENST00000354473 ZC3H15Q8WU90 426 aaKnown RBP23.41■■□□□ 1.34
VPS72-201ENST00000354473 FAM84BQ96KN1 310 aaPredicted RBP23.41■■□□□ 1.34
VPS72-201ENST00000354473 ZBTB7BO15156 539 aaPredicted RBP23.4■■□□□ 1.34
VPS72-201ENST00000354473 C1orf115Q9H7X2 142 aa23.4■■□□□ 1.34
VPS72-201ENST00000354473 CEP350Q5VT06 3117 aa23.4■■□□□ 1.34
VPS72-201ENST00000354473 PNMA6EA0A0J9YXQ4 647 aa23.39■■□□□ 1.34
VPS72-201ENST00000354473 FGFR2P21802 821 aa23.39■■□□□ 1.34
VPS72-201ENST00000354473 IL15P40933 162 aaPredicted RBP23.39■■□□□ 1.34
VPS72-201ENST00000354473 VPS37DQ86XT2 251 aa23.39■■□□□ 1.34
VPS72-201ENST00000354473 CEP126Q9P2H0 1117 aa23.39■■□□□ 1.34
VPS72-201ENST00000354473 PGAP2Q9UHJ9 254 aa23.39■■□□□ 1.34
VPS72-201ENST00000354473 IFIT1P09914 478 aaKnown RBP23.38■■□□□ 1.33
VPS72-201ENST00000354473 CAVIN4Q5BKX8 364 aa23.38■■□□□ 1.33
VPS72-201ENST00000354473 TDRD7Q8NHU6 1098 aaKnown RBP23.38■■□□□ 1.33
VPS72-201ENST00000354473 MYOZ2Q9NPC6 264 aa23.38■■□□□ 1.33
VPS72-201ENST00000354473 JAG2Q9Y219 1238 aa23.38■■□□□ 1.33
VPS72-201ENST00000354473 SASH1O94885 1247 aa23.37■■□□□ 1.33
VPS72-201ENST00000354473 SLC5A1P13866 664 aa23.37■■□□□ 1.33
VPS72-201ENST00000354473 FBXO33Q7Z6M2 555 aa23.37■■□□□ 1.33
VPS72-201ENST00000354473 KIAA0825Q8IV33 1275 aa23.37■■□□□ 1.33
VPS72-201ENST00000354473 OGFOD1Q8N543 542 aa23.37■■□□□ 1.33
VPS72-201ENST00000354473 CERS5Q8N5B7 392 aa23.37■■□□□ 1.33
VPS72-201ENST00000354473 LPIN2Q92539 896 aa23.37■■□□□ 1.33
VPS72-201ENST00000354473 TRAF5O00463 557 aa23.36■■□□□ 1.33
VPS72-201ENST00000354473 ATP2B3Q16720 1220 aa23.36■■□□□ 1.33
VPS72-201ENST00000354473 GLIS2Q9BZE0 524 aaPredicted RBP23.36■■□□□ 1.33
VPS72-201ENST00000354473 CREBZFQ9NS37 354 aa23.36■■□□□ 1.33
VPS72-201ENST00000354473 IQSEC3Q9UPP2 1182 aaPredicted RBP23.36■■□□□ 1.33
VPS72-201ENST00000354473 TRPM7Q96QT4 1865 aa23.36■■□□□ 1.33
VPS72-201ENST00000354473 ARAP2Q8WZ64 1704 aa23.36■■□□□ 1.33
VPS72-201ENST00000354473 BCAMP50895 628 aa23.35■■□□□ 1.33
VPS72-201ENST00000354473 FMR1Q06787 632 aaKnown RBP eCLIP23.35■■□□□ 1.332e-7■■■■■ 26.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms