RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 NCOA5Q9HCD5 579 aaKnown RBP14.22□□□□□ -0.13
DDX4-201ENST00000353507 NRBP1Q9UHY1 535 aa14.22□□□□□ -0.13
DDX4-201ENST00000353507 RCOR1Q9UKL0 485 aa14.22□□□□□ -0.13
DDX4-201ENST00000353507 TJP1Q07157 1748 aa14.22□□□□□ -0.13
DDX4-201ENST00000353507 NUP188Q5SRE5 1749 aa14.22□□□□□ -0.13
DDX4-201ENST00000353507 SPEF2Q9C093 1822 aa14.22□□□□□ -0.13
DDX4-201ENST00000353507 FAM177BA6PVY3 158 aa14.22□□□□□ -0.13
DDX4-201ENST00000353507 NBPF26B4DH59 902 aa14.22□□□□□ -0.13
DDX4-201ENST00000353507 EYA2O00167 538 aa14.22□□□□□ -0.13
DDX4-201ENST00000353507 RIOK3O14730 519 aaKnown RBP14.22□□□□□ -0.13
DDX4-201ENST00000353507 RNF113AO15541 343 aaKnown RBP14.22□□□□□ -0.13
DDX4-201ENST00000353507 NBPF14Q5TI25 921 aa14.22□□□□□ -0.13
DDX4-201ENST00000353507 ATL3Q6DD88 541 aa14.22□□□□□ -0.13
DDX4-201ENST00000353507 ZSCAN25Q6NSZ9 544 aa14.22□□□□□ -0.13
DDX4-201ENST00000353507 NBPF10Q6P3W6 841 aaKnown RBP14.22□□□□□ -0.13
DDX4-201ENST00000353507 NBPF15Q8N660 670 aa14.22□□□□□ -0.13
DDX4-201ENST00000353507 CCDC94Q9BW85 323 aaPredicted RBP14.22□□□□□ -0.13
DDX4-201ENST00000353507 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.21□□□□□ -0.13
DDX4-201ENST00000353507 A0A1B0GUL7 405 aa14.21□□□□□ -0.13
DDX4-201ENST00000353507 EXOSC10Q01780 885 aaKnown RBP14.21□□□□□ -0.13
DDX4-201ENST00000353507 GUCY1B3Q02153 619 aa14.21□□□□□ -0.13
DDX4-201ENST00000353507 ZNF710Q8N1W2 664 aa14.21□□□□□ -0.13
DDX4-201ENST00000353507 USP28Q96RU2 1077 aa14.21□□□□□ -0.13
DDX4-201ENST00000353507 AGXT2Q9BYV1 514 aa14.21□□□□□ -0.13
DDX4-201ENST00000353507 ZBTB3Q9H5J0 574 aa14.21□□□□□ -0.13
DDX4-201ENST00000353507 BCL2L12Q9HB09 334 aa14.21□□□□□ -0.13
DDX4-201ENST00000353507 BECN2A8MW95 431 aa14.21□□□□□ -0.14
DDX4-201ENST00000353507 PPFIA3O75145 1194 aa14.21□□□□□ -0.14
DDX4-201ENST00000353507 ADD1P35611 737 aaKnown RBP14.21□□□□□ -0.14
DDX4-201ENST00000353507 ME1P48163 572 aa14.21□□□□□ -0.14
DDX4-201ENST00000353507 LRRFIP1Q32MZ4 808 aaKnown RBP14.21□□□□□ -0.14
DDX4-201ENST00000353507 LRRC24Q50LG9 513 aa14.21□□□□□ -0.14
DDX4-201ENST00000353507 CHST3Q7LGC8 479 aa14.21□□□□□ -0.14
DDX4-201ENST00000353507 ZNF594Q96JF6 807 aaPredicted RBP14.21□□□□□ -0.14
DDX4-201ENST00000353507 TNS3Q68CZ2 1445 aa14.2□□□□□ -0.14
DDX4-201ENST00000353507 CDC25BP30305 580 aa14.2□□□□□ -0.14
DDX4-201ENST00000353507 C16orf45Q96MC5 204 aaPredicted RBP14.2□□□□□ -0.14
DDX4-201ENST00000353507 GORABQ5T7V8 394 aa14.2□□□□□ -0.14
DDX4-201ENST00000353507 C11orf57Q6ZUT1 292 aaPredicted RBP14.2□□□□□ -0.14
DDX4-201ENST00000353507 FSIP1Q8NA03 581 aa14.2□□□□□ -0.14
DDX4-201ENST00000353507 CCDC191Q8NCU4 936 aa14.2□□□□□ -0.14
DDX4-201ENST00000353507 ZNF274Q96GC6 653 aaPredicted RBP14.2□□□□□ -0.14
DDX4-201ENST00000353507 GOLPH3LQ9H4A5 285 aa14.2□□□□□ -0.14
DDX4-201ENST00000353507 CARMIL3Q8ND23 1372 aa14.2□□□□□ -0.14
DDX4-201ENST00000353507 A0A0G2JLW4 131 aa14.19□□□□□ -0.14
DDX4-201ENST00000353507 PDIA3P30101 505 aaKnown RBP14.19□□□□□ -0.14
DDX4-201ENST00000353507 FKBP4Q02790 459 aaKnown RBP eCLIP14.19□□□□□ -0.14
DDX4-201ENST00000353507 FAM160A1Q05DH4 1040 aa14.19□□□□□ -0.14
DDX4-201ENST00000353507 SALL1Q9NSC2 1324 aa14.19□□□□□ -0.14
DDX4-201ENST00000353507 M0R2C6 588 aa14.19□□□□□ -0.14
DDX4-201ENST00000353507 IQCB1Q15051 598 aa14.19□□□□□ -0.14
DDX4-201ENST00000353507 ANO10Q9NW15 660 aa14.19□□□□□ -0.14
DDX4-201ENST00000353507 CEP126Q9P2H0 1117 aa14.19□□□□□ -0.14
DDX4-201ENST00000353507 CIAO1O76071 339 aa14.18□□□□□ -0.14
DDX4-201ENST00000353507 A1BGP04217 495 aa14.18□□□□□ -0.14
DDX4-201ENST00000353507 WASHC4Q2M389 1173 aa14.18□□□□□ -0.14
DDX4-201ENST00000353507 CCDC158Q5M9N0 1113 aa14.18□□□□□ -0.14
DDX4-201ENST00000353507 TTC39AQ5SRH9 613 aa14.18□□□□□ -0.14
DDX4-201ENST00000353507 SARM1Q6SZW1 724 aa14.18□□□□□ -0.14
DDX4-201ENST00000353507 PCDH11XQ9BZA7 1347 aa14.18□□□□□ -0.14
DDX4-201ENST00000353507 PCDH11YQ9BZA8 1340 aa14.18□□□□□ -0.14
DDX4-201ENST00000353507 TTLL5Q6EMB2 1281 aa14.18□□□□□ -0.14
DDX4-201ENST00000353507 CTNNA3Q9UI47 895 aa14.18□□□□□ -0.14
DDX4-201ENST00000353507 IMMTQ16891 758 aaKnown RBP14.17□□□□□ -0.14
DDX4-201ENST00000353507 CCDC57Q2TAC2 916 aa14.17□□□□□ -0.14
DDX4-201ENST00000353507 CEP57L1Q8IYX8 460 aa14.17□□□□□ -0.14
DDX4-201ENST00000353507 CACTINQ8WUQ7 758 aaKnown RBP14.17□□□□□ -0.14
DDX4-201ENST00000353507 UBR2Q8IWV8 1755 aa14.17□□□□□ -0.14
DDX4-201ENST00000353507 TMEM94Q12767 1356 aa14.17□□□□□ -0.14
DDX4-201ENST00000353507 TNNT1P13805 278 aa14.17□□□□□ -0.14
DDX4-201ENST00000353507 SNW1Q13573 536 aaKnown RBP14.17□□□□□ -0.14
DDX4-201ENST00000353507 TPD52L1Q16890 204 aaPredicted RBP14.17□□□□□ -0.14
DDX4-201ENST00000353507 CCDC144BQ3MJ40 725 aa14.17□□□□□ -0.14
DDX4-201ENST00000353507 CCDC144CPQ8IYA2 1237 aa14.17□□□□□ -0.14
DDX4-201ENST00000353507 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.17□□□□□ -0.14
DDX4-201ENST00000353507 MRPS27Q92552 414 aaKnown RBP14.17□□□□□ -0.14
DDX4-201ENST00000353507 MRFAP1L1Q96HT8 127 aa14.17□□□□□ -0.14
DDX4-201ENST00000353507 PUS3Q9BZE2 481 aaKnown RBP14.17□□□□□ -0.14
DDX4-201ENST00000353507 ATG3Q9NT62 314 aa14.17□□□□□ -0.14
DDX4-201ENST00000353507 HAND2P61296 217 aa14.17□□□□□ -0.14
DDX4-201ENST00000353507 SF3A1Q15459 793 aaKnown RBP14.17□□□□□ -0.14
DDX4-201ENST00000353507 ZRSR1Q15695 479 aaKnown RBP14.17□□□□□ -0.14
DDX4-201ENST00000353507 PDCL2Q8N4E4 241 aa14.17□□□□□ -0.14
DDX4-201ENST00000353507 OSBP2Q969R2 916 aa14.17□□□□□ -0.14
DDX4-201ENST00000353507 TAF7LQ5H9L4 462 aa14.16□□□□□ -0.14
DDX4-201ENST00000353507 ZCRB1Q8TBF4 217 aaKnown RBP14.16□□□□□ -0.14
DDX4-201ENST00000353507 NAT10Q9H0A0 1025 aaKnown RBP14.16□□□□□ -0.14
DDX4-201ENST00000353507 SMTNL1A8MU46 457 aa14.16□□□□□ -0.14
DDX4-201ENST00000353507 DHX16O60231 1041 aaKnown RBP14.16□□□□□ -0.14
DDX4-201ENST00000353507 NEMFO60524 1076 aa14.16□□□□□ -0.14
DDX4-201ENST00000353507 ZFYP08048 801 aaPredicted RBP14.16□□□□□ -0.14
DDX4-201ENST00000353507 STK38Q15208 465 aa14.16□□□□□ -0.14
DDX4-201ENST00000353507 ENGASEQ8NFI3 743 aa14.16□□□□□ -0.14
DDX4-201ENST00000353507 C8orf76Q96K31 380 aa14.16□□□□□ -0.14
DDX4-201ENST00000353507 PKNOX2Q96KN3 472 aa14.16□□□□□ -0.14
DDX4-201ENST00000353507 SDF4Q9BRK5 362 aa14.16□□□□□ -0.14
DDX4-201ENST00000353507 AKAP2Q9Y2D5 859 aa14.16□□□□□ -0.14
DDX4-201ENST00000353507 ZNF330Q9Y3S2 320 aaPredicted RBP14.16□□□□□ -0.14
DDX4-201ENST00000353507 GOLGA8BA8MQT2 603 aa14.15□□□□□ -0.14
DDX4-201ENST00000353507 PPP4R3BQ5MIZ7 849 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms