RNA–Protein interactions for RNA: ENST00000353024.4

TUFT1-201, Transcript of tuftelin 1, humanhuman

TSL 2 BASIC

Gene TUFT1, Length 2,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUFT1-201ENST00000353024 PANK2Q9BZ23 570 aa18.36■□□□□ 0.53
TUFT1-201ENST00000353024 A0A0G2JLW4 131 aa18.35■□□□□ 0.53
TUFT1-201ENST00000353024 UBAP1LF5GYI3 381 aa18.35■□□□□ 0.53
TUFT1-201ENST00000353024 F13A1P00488 732 aa18.35■□□□□ 0.53
TUFT1-201ENST00000353024 ZSCAN23Q3MJ62 389 aa18.35■□□□□ 0.53
TUFT1-201ENST00000353024 TMEM87AQ8NBN3 555 aa18.35■□□□□ 0.53
TUFT1-201ENST00000353024 C8orf37Q96NL8 207 aa18.35■□□□□ 0.53
TUFT1-201ENST00000353024 MROH5Q6ZUA9 1318 aa18.35■□□□□ 0.53
TUFT1-201ENST00000353024 LRRFIP1Q32MZ4 808 aaKnown RBP18.35■□□□□ 0.53
TUFT1-201ENST00000353024 LINC00116Q8NCU8 138 aa18.35■□□□□ 0.53
TUFT1-201ENST00000353024 NGLY1Q96IV0 654 aa18.35■□□□□ 0.53
TUFT1-201ENST00000353024 LAMA4Q16363 1823 aa18.35■□□□□ 0.53
TUFT1-201ENST00000353024 BCORQ6W2J9 1755 aa18.35■□□□□ 0.53
TUFT1-201ENST00000353024 RTL9Q8NET4 1388 aa18.34■□□□□ 0.53
TUFT1-201ENST00000353024 LAMB2P55268 1798 aa18.34■□□□□ 0.53
TUFT1-201ENST00000353024 ARAP2Q8WZ64 1704 aa18.34■□□□□ 0.53
TUFT1-201ENST00000353024 NCLP19338 710 aaKnown RBP18.34■□□□□ 0.53
TUFT1-201ENST00000353024 ARID4AP29374 1257 aaPredicted RBP18.34■□□□□ 0.53
TUFT1-201ENST00000353024 EXOSC10Q01780 885 aaKnown RBP18.34■□□□□ 0.53
TUFT1-201ENST00000353024 Q6ZUG5 572 aa18.34■□□□□ 0.53
TUFT1-201ENST00000353024 TMEM63CQ9P1W3 806 aa18.34■□□□□ 0.53
TUFT1-201ENST00000353024 RBM27Q9P2N5 1060 aaKnown RBP18.34■□□□□ 0.53
TUFT1-201ENST00000353024 NIP7Q9Y221 180 aaKnown RBP eCLIP18.34■□□□□ 0.53
TUFT1-201ENST00000353024 MBD3O95983 291 aa18.33■□□□□ 0.52
TUFT1-201ENST00000353024 PUM3Q15397 648 aaKnown RBP18.33■□□□□ 0.52
TUFT1-201ENST00000353024 APPBP2Q92624 585 aa18.33■□□□□ 0.52
TUFT1-201ENST00000353024 AGXT2Q9BYV1 514 aa18.33■□□□□ 0.52
TUFT1-201ENST00000353024 SEC31BQ9NQW1 1179 aa18.33■□□□□ 0.52
TUFT1-201ENST00000353024 MYH7P12883 1935 aa18.32■□□□□ 0.52
TUFT1-201ENST00000353024 FAM177BA6PVY3 158 aa18.32■□□□□ 0.52
TUFT1-201ENST00000353024 HMGB1P09429 215 aaKnown RBP18.32■□□□□ 0.52
TUFT1-201ENST00000353024 FOXD4L6Q3SYB3 417 aaPredicted RBP18.32■□□□□ 0.52
TUFT1-201ENST00000353024 CCDC102BQ68D86 513 aa18.32■□□□□ 0.52
TUFT1-201ENST00000353024 FOXD4L3Q6VB84 417 aaPredicted RBP18.32■□□□□ 0.52
TUFT1-201ENST00000353024 DHX32Q7L7V1 743 aaKnown RBP18.32■□□□□ 0.52
TUFT1-201ENST00000353024 USP48Q86UV5 1035 aa18.32■□□□□ 0.52
TUFT1-201ENST00000353024 LPIN2Q92539 896 aa18.32■□□□□ 0.52
TUFT1-201ENST00000353024 GDPD2Q9HCC8 539 aa18.32■□□□□ 0.52
TUFT1-201ENST00000353024 E7EWF7 191 aa18.32■□□□□ 0.52
TUFT1-201ENST00000353024 PHKA1P46020 1223 aa18.32■□□□□ 0.52
TUFT1-201ENST00000353024 PTF1AQ7RTS3 328 aa18.32■□□□□ 0.52
TUFT1-201ENST00000353024 GTF3C6Q969F1 213 aa18.32■□□□□ 0.52
TUFT1-201ENST00000353024 PUS7LQ9H0K6 701 aaKnown RBP18.32■□□□□ 0.52
TUFT1-201ENST00000353024 TCHHQ07283 1943 aa18.32■□□□□ 0.52
TUFT1-201ENST00000353024 GADD45BO75293 160 aaPredicted RBP18.31■□□□□ 0.52
TUFT1-201ENST00000353024 TTLL5Q6EMB2 1281 aa18.31■□□□□ 0.52
TUFT1-201ENST00000353024 CLEC4GQ6UXB4 293 aa18.31■□□□□ 0.52
TUFT1-201ENST00000353024 HELBQ8NG08 1087 aaPredicted RBP18.31■□□□□ 0.52
TUFT1-201ENST00000353024 ADD2P35612 726 aa18.31■□□□□ 0.52
TUFT1-201ENST00000353024 WASHC4Q2M389 1173 aa18.31■□□□□ 0.52
TUFT1-201ENST00000353024 PIH1D3Q9NQM4 214 aaKnown RBP18.31■□□□□ 0.52
TUFT1-201ENST00000353024 CNPY2Q9Y2B0 182 aa18.31■□□□□ 0.52
TUFT1-201ENST00000353024 CNTNAP4Q9C0A0 1308 aa18.3■□□□□ 0.52
TUFT1-201ENST00000353024 ATRNO75882 1429 aa18.3■□□□□ 0.52
TUFT1-201ENST00000353024 THSD7AQ9UPZ6 1657 aa18.3■□□□□ 0.52
TUFT1-201ENST00000353024 PDIA4P13667 645 aaKnown RBP18.3■□□□□ 0.52
TUFT1-201ENST00000353024 CCDC152Q4G0S7 254 aa18.3■□□□□ 0.52
TUFT1-201ENST00000353024 UQCRFS1P1P0C7P4 283 aa18.29■□□□□ 0.52
TUFT1-201ENST00000353024 STK3Q13188 491 aa18.29■□□□□ 0.52
TUFT1-201ENST00000353024 BRF1Q92994 677 aa18.29■□□□□ 0.52
TUFT1-201ENST00000353024 LRRC2Q9BYS8 371 aa18.29■□□□□ 0.52
TUFT1-201ENST00000353024 ZNF652Q9Y2D9 606 aa18.29■□□□□ 0.52
TUFT1-201ENST00000353024 COL4A1P02462 1669 aa18.29■□□□□ 0.52
TUFT1-201ENST00000353024 TTF1Q15361 905 aaPredicted RBP18.29■□□□□ 0.52
TUFT1-201ENST00000353024 LARP1BQ659C4 914 aaKnown RBP18.29■□□□□ 0.52
TUFT1-201ENST00000353024 ATP6V1DQ9Y5K8 247 aa18.29■□□□□ 0.52
TUFT1-201ENST00000353024 RGL2O15211 777 aa18.28■□□□□ 0.52
TUFT1-201ENST00000353024 GPAA1O43292 621 aa18.28■□□□□ 0.52
TUFT1-201ENST00000353024 FGAP02671 866 aa18.28■□□□□ 0.52
TUFT1-201ENST00000353024 HSP90B1P14625 803 aaKnown RBP18.28■□□□□ 0.52
TUFT1-201ENST00000353024 KCNQ4P56696 695 aa18.28■□□□□ 0.52
TUFT1-201ENST00000353024 FBXL16Q8N461 479 aa18.28■□□□□ 0.52
TUFT1-201ENST00000353024 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.28■□□□□ 0.52
TUFT1-201ENST00000353024 SNAP23O00161 211 aa18.28■□□□□ 0.52
TUFT1-201ENST00000353024 PFKFB2O60825 505 aa18.28■□□□□ 0.52
TUFT1-201ENST00000353024 MPHOSPH8Q99549 860 aa18.28■□□□□ 0.52
TUFT1-201ENST00000353024 CTNNA3Q9UI47 895 aa18.28■□□□□ 0.52
TUFT1-201ENST00000353024 MYO5AQ9Y4I1 1855 aaKnown RBP18.27■□□□□ 0.52
TUFT1-201ENST00000353024 TCRBV5S4A2TA0A5A2 114 aa18.27■□□□□ 0.52
TUFT1-201ENST00000353024 SLC5A1P13866 664 aa18.27■□□□□ 0.52
TUFT1-201ENST00000353024 PDCP20941 246 aa18.27■□□□□ 0.52
TUFT1-201ENST00000353024 SCRN1Q12765 414 aa18.27■□□□□ 0.52
TUFT1-201ENST00000353024 UBE3CQ15386 1083 aa18.27■□□□□ 0.52
TUFT1-201ENST00000353024 ZSCAN25Q6NSZ9 544 aa18.27■□□□□ 0.52
TUFT1-201ENST00000353024 BCL2L12Q9HB09 334 aa18.27■□□□□ 0.52
TUFT1-201ENST00000353024 SPATA31A6Q5VVP1 1343 aa18.27■□□□□ 0.51
TUFT1-201ENST00000353024 VPS37CA5D8V6 355 aaPredicted RBP18.26■□□□□ 0.51
TUFT1-201ENST00000353024 JAK2O60674 1132 aa18.26■□□□□ 0.51
TUFT1-201ENST00000353024 SLC9C2Q5TAH2 1124 aa18.26■□□□□ 0.51
TUFT1-201ENST00000353024 CDC37L1Q7L3B6 337 aa18.26■□□□□ 0.51
TUFT1-201ENST00000353024 SMARCC2Q8TAQ2 1214 aa18.26■□□□□ 0.51
TUFT1-201ENST00000353024 SCN7AQ01118 1682 aa18.26■□□□□ 0.51
TUFT1-201ENST00000353024 DNM1Q05193 864 aaKnown RBP18.26■□□□□ 0.51
TUFT1-201ENST00000353024 RC3H1Q5TC82 1133 aaKnown RBP18.26■□□□□ 0.51
TUFT1-201ENST00000353024 USP21Q9UK80 565 aa18.26■□□□□ 0.51
TUFT1-201ENST00000353024 IGHMBP2P38935 993 aaKnown RBP18.25■□□□□ 0.51
TUFT1-201ENST00000353024 C3orf67Q6ZVT6 689 aa18.25■□□□□ 0.51
TUFT1-201ENST00000353024 BTAF1O14981 1849 aa18.25■□□□□ 0.51
TUFT1-201ENST00000353024 NHSQ6T4R5 1651 aa18.25■□□□□ 0.51
TUFT1-201ENST00000353024 PDE6AP16499 860 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms