RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 CCDC144BQ3MJ40 725 aa28.79■■■□□ 2.2
CPNE1-202ENST00000352393 CCDC144CPQ8IYA2 1237 aa28.79■■■□□ 2.2
CPNE1-202ENST00000352393 USP28Q96RU2 1077 aa28.79■■■□□ 2.2
CPNE1-202ENST00000352393 SNW1Q13573 536 aaKnown RBP28.78■■■□□ 2.2
CPNE1-202ENST00000352393 CACTINQ8WUQ7 758 aaKnown RBP28.78■■■□□ 2.2
CPNE1-202ENST00000352393 UBR2Q8IWV8 1755 aa28.78■■■□□ 2.2
CPNE1-202ENST00000352393 E7EWF7 191 aa28.78■■■□□ 2.2
CPNE1-202ENST00000352393 CCDC9Q9Y3X0 531 aaKnown RBP28.78■■■□□ 2.2
CPNE1-202ENST00000352393 MAST3O60307 1309 aa28.78■■■□□ 2.2
CPNE1-202ENST00000352393 FOSBP53539 338 aa28.77■■■□□ 2.2
CPNE1-202ENST00000352393 ENGASEQ8NFI3 743 aa28.77■■■□□ 2.2
CPNE1-202ENST00000352393 MRFAP1L1Q96HT8 127 aa28.77■■■□□ 2.2
CPNE1-202ENST00000352393 ZNF396Q96N95 335 aaPredicted RBP28.77■■■□□ 2.2
CPNE1-202ENST00000352393 A0A0G2JLW4 131 aa28.76■■■□□ 2.2
CPNE1-202ENST00000352393 HSPD1P10809 573 aaKnown RBP28.76■■■□□ 2.2
CPNE1-202ENST00000352393 CCDC73Q6ZRK6 1079 aa28.76■■■□□ 2.2
CPNE1-202ENST00000352393 NEUROD6Q96NK8 337 aa28.76■■■□□ 2.2
CPNE1-202ENST00000352393 GOLGA6L19H0YKK7 550 aa28.76■■■□□ 2.19
CPNE1-202ENST00000352393 IL15P40933 162 aaPredicted RBP28.76■■■□□ 2.19
CPNE1-202ENST00000352393 ILDR1Q86SU0 546 aaPredicted RBP28.76■■■□□ 2.19
CPNE1-202ENST00000352393 NWD2Q9ULI1 1742 aa28.76■■■□□ 2.19
CPNE1-202ENST00000352393 CCT2P78371 535 aaKnown RBP28.75■■■□□ 2.19
CPNE1-202ENST00000352393 ZNF274Q96GC6 653 aaPredicted RBP28.75■■■□□ 2.19
CPNE1-202ENST00000352393 C16orf45Q96MC5 204 aaPredicted RBP28.75■■■□□ 2.19
CPNE1-202ENST00000352393 NCOA5Q9HCD5 579 aaKnown RBP28.75■■■□□ 2.19
CPNE1-202ENST00000352393 DDX60Q8IY21 1712 aaKnown RBP28.75■■■□□ 2.19
CPNE1-202ENST00000352393 NBPF26B4DH59 902 aa28.75■■■□□ 2.19
CPNE1-202ENST00000352393 CSB-PGBD3P0DP91 1061 aa28.75■■■□□ 2.19
CPNE1-202ENST00000352393 CABP4P57796 275 aa28.75■■■□□ 2.19
CPNE1-202ENST00000352393 FAM160A1Q05DH4 1040 aa28.75■■■□□ 2.19
CPNE1-202ENST00000352393 NBPF14Q5TI25 921 aa28.75■■■□□ 2.19
CPNE1-202ENST00000352393 NBPF10Q6P3W6 841 aaKnown RBP28.75■■■□□ 2.19
CPNE1-202ENST00000352393 NBPF15Q8N660 670 aa28.75■■■□□ 2.19
CPNE1-202ENST00000352393 CARMIL3Q8ND23 1372 aa28.74■■■□□ 2.19
CPNE1-202ENST00000352393 SMTNL1A8MU46 457 aa28.74■■■□□ 2.19
CPNE1-202ENST00000352393 PDIA3P30101 505 aaKnown RBP28.74■■■□□ 2.19
CPNE1-202ENST00000352393 PROSER2Q86WR7 435 aaPredicted RBP28.74■■■□□ 2.19
CPNE1-202ENST00000352393 TIMM10P62072 90 aa28.73■■■□□ 2.19
CPNE1-202ENST00000352393 PPP4R3BQ5MIZ7 849 aa28.73■■■□□ 2.19
CPNE1-202ENST00000352393 CWC25Q9NXE8 425 aaPredicted RBP28.73■■■□□ 2.19
CPNE1-202ENST00000352393 RNF113AO15541 343 aaKnown RBP28.73■■■□□ 2.19
CPNE1-202ENST00000352393 FBXL16Q8N461 479 aa28.73■■■□□ 2.19
CPNE1-202ENST00000352393 PDCL2Q8N4E4 241 aa28.73■■■□□ 2.19
CPNE1-202ENST00000352393 KINO60870 393 aaKnown RBP28.72■■■□□ 2.19
CPNE1-202ENST00000352393 C19orf44Q9H6X5 657 aa28.72■■■□□ 2.19
CPNE1-202ENST00000352393 EYA2O00167 538 aa28.71■■■□□ 2.19
CPNE1-202ENST00000352393 TNNT1P13805 278 aa28.71■■■□□ 2.19
CPNE1-202ENST00000352393 EVCP57679 992 aa28.71■■■□□ 2.19
CPNE1-202ENST00000352393 SYCP1Q15431 976 aa28.71■■■□□ 2.19
CPNE1-202ENST00000352393 DHX40Q8IX18 779 aaKnown RBP28.71■■■□□ 2.19
CPNE1-202ENST00000352393 PRDM4Q9UKN5 801 aa28.71■■■□□ 2.19
CPNE1-202ENST00000352393 PAPPAQ13219 1627 aa28.71■■■□□ 2.19
CPNE1-202ENST00000352393 IFIT1P09914 478 aaKnown RBP28.7■■■□□ 2.19
CPNE1-202ENST00000352393 LRRC8AQ8IWT6 810 aa28.7■■■□□ 2.19
CPNE1-202ENST00000352393 FSIP1Q8NA03 581 aa28.7■■■□□ 2.19
CPNE1-202ENST00000352393 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.7■■■□□ 2.19
CPNE1-202ENST00000352393 CHMP4CQ96CF2 233 aa28.7■■■□□ 2.19
CPNE1-202ENST00000352393 ANO10Q9NW15 660 aa28.7■■■□□ 2.19
CPNE1-202ENST00000352393 M0R2C6 588 aa28.7■■■□□ 2.18
CPNE1-202ENST00000352393 NEMFO60524 1076 aa28.7■■■□□ 2.18
CPNE1-202ENST00000352393 TTLL7Q6ZT98 887 aa28.7■■■□□ 2.18
CPNE1-202ENST00000352393 CIAO1O76071 339 aa28.69■■■□□ 2.18
CPNE1-202ENST00000352393 ATP2B3Q16720 1220 aa28.69■■■□□ 2.18
CPNE1-202ENST00000352393 LRRC24Q50LG9 513 aa28.69■■■□□ 2.18
CPNE1-202ENST00000352393 FDPSP14324 419 aaKnown RBP28.69■■■□□ 2.18
CPNE1-202ENST00000352393 RBM6P78332 1123 aaKnown RBP28.69■■■□□ 2.18
CPNE1-202ENST00000352393 NCBP1Q09161 790 aaKnown RBP28.69■■■□□ 2.18
CPNE1-202ENST00000352393 A0A1B0GUL7 405 aa28.68■■■□□ 2.18
CPNE1-202ENST00000352393 ME1P48163 572 aa28.68■■■□□ 2.18
CPNE1-202ENST00000352393 GUCY1B3Q02153 619 aa28.68■■■□□ 2.18
CPNE1-202ENST00000352393 PAXBP1Q9Y5B6 917 aa28.68■■■□□ 2.18
CPNE1-202ENST00000352393 KCPQ6ZWJ8 1503 aa28.68■■■□□ 2.18
CPNE1-202ENST00000352393 CHST3Q7LGC8 479 aa28.67■■■□□ 2.18
CPNE1-202ENST00000352393 ATG3Q9NT62 314 aa28.67■■■□□ 2.18
CPNE1-202ENST00000352393 RTEL1Q9NZ71 1219 aa28.67■■■□□ 2.18
CPNE1-202ENST00000352393 TTLL5Q6EMB2 1281 aa28.67■■■□□ 2.18
CPNE1-202ENST00000352393 FMR1NBQ8N0W7 255 aaPredicted RBP28.67■■■□□ 2.18
CPNE1-202ENST00000352393 NAP1L2Q9ULW6 460 aaPredicted RBP28.67■■■□□ 2.18
CPNE1-202ENST00000352393 BECN2A8MW95 431 aa28.66■■■□□ 2.18
CPNE1-202ENST00000352393 CHRNA2Q15822 529 aa28.66■■■□□ 2.18
CPNE1-202ENST00000352393 TPD52L1Q16890 204 aaPredicted RBP28.66■■■□□ 2.18
CPNE1-202ENST00000352393 CEP57L1Q8IYX8 460 aa28.66■■■□□ 2.18
CPNE1-202ENST00000352393 MRPS27Q92552 414 aaKnown RBP28.66■■■□□ 2.18
CPNE1-202ENST00000352393 ZNF594Q96JF6 807 aaPredicted RBP28.66■■■□□ 2.18
CPNE1-202ENST00000352393 CCDC191Q8NCU4 936 aa28.66■■■□□ 2.18
CPNE1-202ENST00000352393 OSBP2Q969R2 916 aa28.66■■■□□ 2.18
CPNE1-202ENST00000352393 PCDHA7Q9UN72 937 aa28.66■■■□□ 2.18
CPNE1-202ENST00000352393 TNS3Q68CZ2 1445 aa28.65■■■□□ 2.18
CPNE1-202ENST00000352393 A0A087WWV3 80 aa28.65■■■□□ 2.18
CPNE1-202ENST00000352393 A0A1W2PQ27 194 aa28.65■■■□□ 2.18
CPNE1-202ENST00000352393 A0A1W2PQ64 194 aa28.65■■■□□ 2.18
CPNE1-202ENST00000352393 A0A1W2PQD8 194 aa28.65■■■□□ 2.18
CPNE1-202ENST00000352393 PPFIA3O75145 1194 aa28.65■■■□□ 2.18
CPNE1-202ENST00000352393 ARID5BQ14865 1188 aa28.65■■■□□ 2.18
CPNE1-202ENST00000352393 FOXP2O15409 715 aa28.64■■■□□ 2.18
CPNE1-202ENST00000352393 DDX17Q92841 729 aaKnown RBP28.64■■■□□ 2.18
CPNE1-202ENST00000352393 PRDM10Q9NQV6 1147 aa28.64■■■□□ 2.18
CPNE1-202ENST00000352393 ADALQ6DHV7 355 aa28.64■■■□□ 2.18
CPNE1-202ENST00000352393 CABLES1Q8TDN4 633 aa28.64■■■□□ 2.18
CPNE1-202ENST00000352393 MYH7P12883 1935 aa28.64■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms