RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 TUBB4AP04350 444 aa16.55■□□□□ 0.24
RLIM-202ENST00000349225 LMOD1P29536 600 aaPredicted RBP16.55■□□□□ 0.24
RLIM-202ENST00000349225 SMARCC2Q8TAQ2 1214 aa16.55■□□□□ 0.24
RLIM-202ENST00000349225 PCDHA7Q9UN72 937 aa16.55■□□□□ 0.24
RLIM-202ENST00000349225 GUCY2CP25092 1073 aa16.55■□□□□ 0.24
RLIM-202ENST00000349225 PSME1Q06323 249 aa16.55■□□□□ 0.24
RLIM-202ENST00000349225 KIFC2Q96AC6 838 aa16.55■□□□□ 0.24
RLIM-202ENST00000349225 SIL1Q9H173 461 aa16.55■□□□□ 0.24
RLIM-202ENST00000349225 CWC15Q9P013 229 aaKnown RBP16.55■□□□□ 0.24
RLIM-202ENST00000349225 KIAA1468Q9P260 1216 aa16.55■□□□□ 0.24
RLIM-202ENST00000349225 JRKLQ9Y4A0 524 aa16.55■□□□□ 0.24
RLIM-202ENST00000349225 PRR36Q9H6K5 1346 aa16.54■□□□□ 0.24
RLIM-202ENST00000349225 AK7Q96M32 723 aa16.54■□□□□ 0.24
RLIM-202ENST00000349225 PPP2R3AQ06190 1150 aa16.54■□□□□ 0.24
RLIM-202ENST00000349225 BEND3Q5T5X7 828 aa16.54■□□□□ 0.24
RLIM-202ENST00000349225 FBXO31Q5XUX0 539 aaPredicted RBP16.54■□□□□ 0.24
RLIM-202ENST00000349225 Q6ZUG5 572 aa16.54■□□□□ 0.24
RLIM-202ENST00000349225 CLASRPQ8N2M8 674 aaKnown RBP16.54■□□□□ 0.24
RLIM-202ENST00000349225 BPIFA3Q9BQP9 254 aa16.54■□□□□ 0.24
RLIM-202ENST00000349225 SUGCTQ9HAC7 445 aa16.54■□□□□ 0.24
RLIM-202ENST00000349225 PDE11AQ9HCR9 933 aa16.54■□□□□ 0.24
RLIM-202ENST00000349225 TMEM232C9JQI7 657 aa16.54■□□□□ 0.24
RLIM-202ENST00000349225 ME1P48163 572 aa16.54■□□□□ 0.24
RLIM-202ENST00000349225 FANCCQ00597 558 aa16.54■□□□□ 0.24
RLIM-202ENST00000349225 OS9Q13438 667 aaPredicted RBP16.54■□□□□ 0.24
RLIM-202ENST00000349225 NAT10Q9H0A0 1025 aaKnown RBP16.54■□□□□ 0.24
RLIM-202ENST00000349225 PSEN1P49768 467 aa16.53■□□□□ 0.24
RLIM-202ENST00000349225 GUCY1B3Q02153 619 aa16.53■□□□□ 0.24
RLIM-202ENST00000349225 ISM2Q6H9L7 571 aa16.53■□□□□ 0.24
RLIM-202ENST00000349225 NSUN7Q8NE18 718 aaKnown RBP16.53■□□□□ 0.24
RLIM-202ENST00000349225 EDC3Q96F86 508 aaKnown RBP16.53■□□□□ 0.24
RLIM-202ENST00000349225 VPS18Q9P253 973 aa16.53■□□□□ 0.24
RLIM-202ENST00000349225 EIF3CLB5ME19 914 aaKnown RBP16.53■□□□□ 0.24
RLIM-202ENST00000349225 GNL2Q13823 731 aaKnown RBP16.53■□□□□ 0.24
RLIM-202ENST00000349225 SART3Q15020 963 aaKnown RBP16.53■□□□□ 0.24
RLIM-202ENST00000349225 TAF7Q15545 349 aaPredicted RBP16.53■□□□□ 0.24
RLIM-202ENST00000349225 EIF3CQ99613 913 aaKnown RBP16.53■□□□□ 0.24
RLIM-202ENST00000349225 OVOS2A0A0J9YW53 1432 aa16.53■□□□□ 0.24
RLIM-202ENST00000349225 OVOS2Q6IE36 1432 aa16.53■□□□□ 0.24
RLIM-202ENST00000349225 TPM1P09493 284 aa16.53■□□□□ 0.24
RLIM-202ENST00000349225 AACSQ86V21 672 aa16.53■□□□□ 0.24
RLIM-202ENST00000349225 DHX58Q96C10 678 aa16.53■□□□□ 0.24
RLIM-202ENST00000349225 DRC1Q96MC2 740 aa16.53■□□□□ 0.24
RLIM-202ENST00000349225 MAGEA9P43362 315 aa16.52■□□□□ 0.24
RLIM-202ENST00000349225 EAF2Q96CJ1 260 aaPredicted RBP16.52■□□□□ 0.24
RLIM-202ENST00000349225 PPP2R2CQ9Y2T4 447 aa16.52■□□□□ 0.24
RLIM-202ENST00000349225 TAF5LO75529 589 aa16.52■□□□□ 0.23
RLIM-202ENST00000349225 MMP14P50281 582 aa16.52■□□□□ 0.23
RLIM-202ENST00000349225 WWC2Q6AWC2 1192 aa16.52■□□□□ 0.23
RLIM-202ENST00000349225 CTR9Q6PD62 1173 aa16.52■□□□□ 0.23
RLIM-202ENST00000349225 IL17REQ8NFR9 667 aa16.52■□□□□ 0.23
RLIM-202ENST00000349225 SDF4Q9BRK5 362 aa16.52■□□□□ 0.23
RLIM-202ENST00000349225 CCDC61Q9Y6R9 512 aa16.52■□□□□ 0.23
RLIM-202ENST00000349225 PRR29P0C7W0 189 aa16.51■□□□□ 0.23
RLIM-202ENST00000349225 APOBRQ0VD83 1088 aa16.51■□□□□ 0.23
RLIM-202ENST00000349225 PLEKHA4Q9H4M7 779 aa16.51■□□□□ 0.23
RLIM-202ENST00000349225 A0A1B0GUL7 405 aa16.51■□□□□ 0.23
RLIM-202ENST00000349225 CCDC8Q9H0W5 538 aaPredicted RBP16.51■□□□□ 0.23
RLIM-202ENST00000349225 ZSWIM4Q9H7M6 989 aa16.51■□□□□ 0.23
RLIM-202ENST00000349225 ANKZF1Q9H8Y5 726 aa16.51■□□□□ 0.23
RLIM-202ENST00000349225 INTS13Q9NVM9 706 aa16.51■□□□□ 0.23
RLIM-202ENST00000349225 AKAP2Q9Y2D5 859 aa16.51■□□□□ 0.23
RLIM-202ENST00000349225 LAMA4Q16363 1823 aa16.51■□□□□ 0.23
RLIM-202ENST00000349225 SASH1O94885 1247 aa16.51■□□□□ 0.23
RLIM-202ENST00000349225 NPM1P06748 294 aaKnown RBP eCLIP16.51■□□□□ 0.23
RLIM-202ENST00000349225 BEND6Q5SZJ8 279 aaPredicted RBP16.51■□□□□ 0.23
RLIM-202ENST00000349225 TOGARAM2Q6ZUX3 1019 aa16.51■□□□□ 0.23
RLIM-202ENST00000349225 RABGGTAQ92696 567 aa16.51■□□□□ 0.23
RLIM-202ENST00000349225 IRX2Q9BZI1 471 aaPredicted RBP16.51■□□□□ 0.23
RLIM-202ENST00000349225 BOLA2Q9H3K6 86 aa16.51■□□□□ 0.23
RLIM-202ENST00000349225 KDRP35968 1356 aa16.5■□□□□ 0.23
RLIM-202ENST00000349225 NUTM2FA1L443 756 aa16.5■□□□□ 0.23
RLIM-202ENST00000349225 PI4KAP2A4QPH2 592 aa16.5■□□□□ 0.23
RLIM-202ENST00000349225 ANXA1P04083 346 aa16.5■□□□□ 0.23
RLIM-202ENST00000349225 TTC31Q49AM3 519 aaPredicted RBP16.5■□□□□ 0.23
RLIM-202ENST00000349225 HDGFL1Q5TGJ6 251 aa16.5■□□□□ 0.23
RLIM-202ENST00000349225 NUTM2GQ5VZR2 741 aa16.5■□□□□ 0.23
RLIM-202ENST00000349225 PI4KAP1Q8N8J0 262 aa16.5■□□□□ 0.23
RLIM-202ENST00000349225 MRPS27Q92552 414 aaKnown RBP16.5■□□□□ 0.23
RLIM-202ENST00000349225 PNKPQ96T60 521 aa16.5■□□□□ 0.23
RLIM-202ENST00000349225 MCM6Q14566 821 aa16.5■□□□□ 0.23
RLIM-202ENST00000349225 USPL1Q5W0Q7 1092 aa16.5■□□□□ 0.23
RLIM-202ENST00000349225 NAA16Q6N069 864 aaPredicted RBP16.5■□□□□ 0.23
RLIM-202ENST00000349225 SLC26A8Q96RN1 970 aa16.5■□□□□ 0.23
RLIM-202ENST00000349225 NALCNQ8IZF0 1738 aa16.5■□□□□ 0.23
RLIM-202ENST00000349225 RPS6KA5O75582 802 aa16.5■□□□□ 0.23
RLIM-202ENST00000349225 GNG11P61952 73 aa16.5■□□□□ 0.23
RLIM-202ENST00000349225 STOX1Q6ZVD7 989 aa16.5■□□□□ 0.23
RLIM-202ENST00000349225 MPHOSPH8Q99549 860 aa16.5■□□□□ 0.23
RLIM-202ENST00000349225 NCAPGQ9BPX3 1015 aa16.5■□□□□ 0.23
RLIM-202ENST00000349225 FAN1Q9Y2M0 1017 aa16.5■□□□□ 0.23
RLIM-202ENST00000349225 TFRCP02786 760 aaKnown RBP16.49■□□□□ 0.23
RLIM-202ENST00000349225 TXLNAP40222 546 aa16.49■□□□□ 0.23
RLIM-202ENST00000349225 LRRC31Q6UY01 552 aa16.49■□□□□ 0.23
RLIM-202ENST00000349225 NEK1Q96PY6 1258 aa16.49■□□□□ 0.23
RLIM-202ENST00000349225 NCOA5Q9HCD5 579 aaKnown RBP16.49■□□□□ 0.23
RLIM-202ENST00000349225 A0A0U1RQJ8 604 aa16.49■□□□□ 0.23
RLIM-202ENST00000349225 PTPDC1A2A3K4 754 aa16.49■□□□□ 0.23
RLIM-202ENST00000349225 CCDC151A5D8V7 595 aa16.49■□□□□ 0.23
RLIM-202ENST00000349225 HSP90B1P14625 803 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms