RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 SETDB2Q96T68 719 aa12.59□□□□□ -0.39
SMARCE1-202ENST00000348513 POLD1P28340 1107 aa12.59□□□□□ -0.39
SMARCE1-202ENST00000348513 PCK1P35558 622 aa12.59□□□□□ -0.39
SMARCE1-202ENST00000348513 PICALMQ13492 652 aa12.59□□□□□ -0.39
SMARCE1-202ENST00000348513 RHPN1Q8TCX5 695 aa12.59□□□□□ -0.39
SMARCE1-202ENST00000348513 CFAP57Q96MR6 1250 aa12.59□□□□□ -0.39
SMARCE1-202ENST00000348513 DESP17661 470 aa12.59□□□□□ -0.39
SMARCE1-202ENST00000348513 EIF4A2Q14240 407 aaKnown RBP12.59□□□□□ -0.39
SMARCE1-202ENST00000348513 NECAB1Q8N987 351 aa12.59□□□□□ -0.39
SMARCE1-202ENST00000348513 PSMD2Q13200 908 aa12.58□□□□□ -0.4
SMARCE1-202ENST00000348513 STX8Q9UNK0 236 aa12.58□□□□□ -0.4
SMARCE1-202ENST00000348513 ASXL2Q76L83 1435 aa12.58□□□□□ -0.4
SMARCE1-202ENST00000348513 SMIM24O75264 130 aa12.58□□□□□ -0.4
SMARCE1-202ENST00000348513 CEP85LQ5SZL2 805 aa12.58□□□□□ -0.4
SMARCE1-202ENST00000348513 ORC3Q9UBD5 711 aaPredicted RBP12.58□□□□□ -0.4
SMARCE1-202ENST00000348513 PA2G4Q9UQ80 394 aaKnown RBP12.58□□□□□ -0.4
SMARCE1-202ENST00000348513 NIP7Q9Y221 180 aaKnown RBP eCLIP12.58□□□□□ -0.4
SMARCE1-202ENST00000348513 SAMM50Q9Y512 469 aa12.58□□□□□ -0.4
SMARCE1-202ENST00000348513 CYP7A1P22680 504 aa12.58□□□□□ -0.4
SMARCE1-202ENST00000348513 SPA17Q15506 151 aa12.58□□□□□ -0.4
SMARCE1-202ENST00000348513 RAB34Q9BZG1 259 aa12.58□□□□□ -0.4
SMARCE1-202ENST00000348513 CABP5Q9NP86 173 aa12.58□□□□□ -0.4
SMARCE1-202ENST00000348513 CREB3O43889 395 aa12.58□□□□□ -0.4
SMARCE1-202ENST00000348513 IDEP14735 1019 aa12.58□□□□□ -0.4
SMARCE1-202ENST00000348513 NSRP1Q9H0G5 558 aaKnown RBP12.58□□□□□ -0.4
SMARCE1-202ENST00000348513 PHAXQ9H814 394 aaKnown RBP12.58□□□□□ -0.4
SMARCE1-202ENST00000348513 ODF2LQ9ULJ1 636 aa12.58□□□□□ -0.4
SMARCE1-202ENST00000348513 LDHCP07864 332 aa12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 LACTBP83111 547 aaPredicted RBP12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 LMBR1LQ6UX01 489 aa12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 NFATC2IPQ8NCF5 419 aa12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 NCOA7Q8NI08 942 aa12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 NAP1L3Q99457 506 aaPredicted RBP12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 NCKAP5LQ9HCH0 1330 aa12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 ECM2O94769 699 aaPredicted RBP12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 HLA-DOAP06340 250 aa12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 GBP1P32455 592 aa12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 TUBB4BP68371 445 aa12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 GRM1Q13255 1194 aa12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 TRIM6Q9C030 488 aaPredicted RBP12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 RIMS2Q9UQ26 1411 aa12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 HNRNPH2P55795 449 aaKnown RBP12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 ATP11AP98196 1134 aa12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 MTHFSDQ2M296 383 aaKnown RBP12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 TPX2Q9ULW0 747 aaKnown RBP12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 CAPN7Q9Y6W3 813 aa12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 POTEJP0CG39 1038 aa12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 ATRIPQ8WXE1 791 aa12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 FAM210AQ96ND0 272 aa12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 PPP1R9BQ96SB3 815 aa12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 NUP88Q99567 741 aaPredicted RBP12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 SLC4A4Q9Y6R1 1079 aa12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 SYCP2Q9BX26 1530 aa12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 WDHD1O75717 1129 aaPredicted RBP12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 TOP1P11387 765 aaKnown RBP12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 MAGEA9P43362 315 aa12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 SYT10Q6XYQ8 523 aa12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 ARMC9Q7Z3E5 817 aa12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 CRNKL1Q9BZJ0 848 aaKnown RBP12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 ANAPC4Q9UJX5 808 aa12.57□□□□□ -0.4
SMARCE1-202ENST00000348513 DDB1Q16531 1140 aa12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 KRT24Q2M2I5 525 aa12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 NBPF9Q3BBW0 867 aa12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 C16orf71Q8IYS4 520 aaPredicted RBP12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 FAM114A2Q9NRY5 505 aa12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 STX6O43752 255 aa12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 SNCBQ16143 134 aa12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 NBPF20Q3BBV1 942 aa12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 JAG2Q9Y219 1238 aa12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 NPHP3Q7Z494 1330 aa12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 MAP7D1Q3KQU3 841 aa12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 C6orf163Q5TEZ5 329 aa12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 SIRT1Q96EB6 747 aa12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 UHRF1BP1LA0JNW5 1464 aa12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 ATP2B3Q16720 1220 aa12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 HELBQ8NG08 1087 aaPredicted RBP12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 FAM212AQ96EL1 285 aa12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 RAPGEF6Q8TEU7 1601 aa12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 TTC21AQ8NDW8 1320 aa12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 PPP1R12AO14974 1030 aaPredicted RBP12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 TSPY3P0CV98 308 aa12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 TSPY8P0CW00 308 aa12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 SDSP20132 328 aa12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 PRIM1P49642 420 aaKnown RBP12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 ELF2Q15723 593 aa12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 TDRD12Q587J7 1177 aaKnown RBP12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 TCERG1LQ5VWI1 586 aa12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 BRF1Q92994 677 aa12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 EHMT1Q9H9B1 1298 aa12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 TNNQ9UQP3 1299 aa12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 RABGAP1Q9Y3P9 1069 aa12.56□□□□□ -0.4
SMARCE1-202ENST00000348513 KLF18A0A0U1RQI7 1052 aa12.55□□□□□ -0.4
SMARCE1-202ENST00000348513 CCDC40Q4G0X9 1142 aa12.55□□□□□ -0.4
SMARCE1-202ENST00000348513 ARMC2Q8NEN0 867 aa12.55□□□□□ -0.4
SMARCE1-202ENST00000348513 MMRN2Q9H8L6 949 aa12.55□□□□□ -0.4
SMARCE1-202ENST00000348513 MACROD2A1Z1Q3 448 aa12.55□□□□□ -0.4
SMARCE1-202ENST00000348513 TSNAXIP1Q2TAA8 658 aa12.55□□□□□ -0.4
SMARCE1-202ENST00000348513 AKAP4Q5JQC9 854 aa12.55□□□□□ -0.4
SMARCE1-202ENST00000348513 A6NNZ2 444 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 1420.3 ms