RNA–Protein interactions for RNA: ENST00000347055.3

KRCC1-201, Transcript of lysine rich coiled-coil 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRCC1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1-201ENST00000347055 FPGT-TNNI3KV9GXZ4 949 aa21.2■□□□□ 0.98
KRCC1-201ENST00000347055 SFPQP23246 707 aaKnown RBP eCLIP21.19■□□□□ 0.98
KRCC1-201ENST00000347055 EVCP57679 992 aa21.19■□□□□ 0.98
KRCC1-201ENST00000347055 FGD1P98174 961 aa21.19■□□□□ 0.98
KRCC1-201ENST00000347055 ARID5BQ14865 1188 aa21.19■□□□□ 0.98
KRCC1-201ENST00000347055 FCHSD1Q86WN1 690 aa21.19■□□□□ 0.98
KRCC1-201ENST00000347055 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.19■□□□□ 0.98
KRCC1-201ENST00000347055 RGPD2P0DJD1 1756 aa21.19■□□□□ 0.98
KRCC1-201ENST00000347055 IKBKBO14920 756 aa21.18■□□□□ 0.98
KRCC1-201ENST00000347055 E4F1Q66K89 784 aaPredicted RBP21.18■□□□□ 0.98
KRCC1-201ENST00000347055 DDX11Q96FC9 970 aa21.18■□□□□ 0.98
KRCC1-201ENST00000347055 KIAA1468Q9P260 1216 aa21.18■□□□□ 0.98
KRCC1-201ENST00000347055 PXDNQ92626 1479 aa21.18■□□□□ 0.98
KRCC1-201ENST00000347055 NEURL1BA8MQ27 555 aa21.18■□□□□ 0.98
KRCC1-201ENST00000347055 CTDNEP1O95476 244 aa21.18■□□□□ 0.98
KRCC1-201ENST00000347055 IGKV5-2P06315 115 aa21.18■□□□□ 0.98
KRCC1-201ENST00000347055 ME1P48163 572 aa21.18■□□□□ 0.98
KRCC1-201ENST00000347055 GCKRQ14397 625 aa21.18■□□□□ 0.98
KRCC1-201ENST00000347055 RABL6Q3YEC7 729 aaPredicted RBP21.18■□□□□ 0.98
KRCC1-201ENST00000347055 KBTBD3Q8NAB2 608 aa21.18■□□□□ 0.98
KRCC1-201ENST00000347055 POLR3EQ9NVU0 708 aa21.18■□□□□ 0.98
KRCC1-201ENST00000347055 DBNLQ9UJU6 430 aaKnown RBP21.18■□□□□ 0.98
KRCC1-201ENST00000347055 PLEKHG2Q9H7P9 1386 aa21.17■□□□□ 0.98
KRCC1-201ENST00000347055 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.17■□□□□ 0.98
KRCC1-201ENST00000347055 RFX5P48382 616 aaPredicted RBP21.16■□□□□ 0.98
KRCC1-201ENST00000347055 NLRP12P59046 1061 aa21.16■□□□□ 0.98
KRCC1-201ENST00000347055 BRAPQ7Z569 592 aa21.16■□□□□ 0.98
KRCC1-201ENST00000347055 TIGD1Q96MW7 591 aa21.16■□□□□ 0.98
KRCC1-201ENST00000347055 METTL22Q9BUU2 404 aaPredicted RBP21.16■□□□□ 0.98
KRCC1-201ENST00000347055 TMEM94Q12767 1356 aa21.16■□□□□ 0.98
KRCC1-201ENST00000347055 CARMIL3Q8ND23 1372 aa21.16■□□□□ 0.98
KRCC1-201ENST00000347055 MPRIPQ6WCQ1 1025 aa21.15■□□□□ 0.98
KRCC1-201ENST00000347055 SDF4Q9BRK5 362 aa21.15■□□□□ 0.98
KRCC1-201ENST00000347055 GPR108Q9NPR9 543 aa21.15■□□□□ 0.98
KRCC1-201ENST00000347055 TRMT1Q9NXH9 659 aaKnown RBP21.15■□□□□ 0.98
KRCC1-201ENST00000347055 CBFA2T2O43439 604 aa21.15■□□□□ 0.98
KRCC1-201ENST00000347055 PDIA6Q15084 440 aa21.15■□□□□ 0.98
KRCC1-201ENST00000347055 RIC3Q7Z5B4 369 aa21.15■□□□□ 0.98
KRCC1-201ENST00000347055 PCDHA7Q9UN72 937 aa21.15■□□□□ 0.98
KRCC1-201ENST00000347055 ETF1P62495 437 aaKnown RBP21.14■□□□□ 0.97
KRCC1-201ENST00000347055 SLC20A2Q08357 652 aa21.14■□□□□ 0.97
KRCC1-201ENST00000347055 SIL1Q9H173 461 aa21.14■□□□□ 0.97
KRCC1-201ENST00000347055 ZNF446Q9NWS9 450 aa21.14■□□□□ 0.97
KRCC1-201ENST00000347055 C5P01031 1676 aa21.14■□□□□ 0.97
KRCC1-201ENST00000347055 PSME1Q06323 249 aa21.13■□□□□ 0.97
KRCC1-201ENST00000347055 ARMCX5Q6P1M9 558 aa21.13■□□□□ 0.97
KRCC1-201ENST00000347055 STOX1Q6ZVD7 989 aa21.13■□□□□ 0.97
KRCC1-201ENST00000347055 ILDR1Q86SU0 546 aaPredicted RBP21.13■□□□□ 0.97
KRCC1-201ENST00000347055 LINC00301Q8NCQ3 95 aa21.13■□□□□ 0.97
KRCC1-201ENST00000347055 NOL10Q9BSC4 688 aaKnown RBP21.13■□□□□ 0.97
KRCC1-201ENST00000347055 TSPYL1Q9H0U9 437 aa21.13■□□□□ 0.97
KRCC1-201ENST00000347055 PHF8Q9UPP1 1060 aa21.13■□□□□ 0.97
KRCC1-201ENST00000347055 DHX16O60231 1041 aaKnown RBP21.13■□□□□ 0.97
KRCC1-201ENST00000347055 CEBPZQ03701 1054 aaKnown RBP21.13■□□□□ 0.97
KRCC1-201ENST00000347055 PTPN12Q05209 780 aaKnown RBP21.13■□□□□ 0.97
KRCC1-201ENST00000347055 XPO4Q9C0E2 1151 aaKnown RBP21.13■□□□□ 0.97
KRCC1-201ENST00000347055 GOLGA6L9A6NEM1 432 aa21.12■□□□□ 0.97
KRCC1-201ENST00000347055 IGSF3O75054 1194 aa21.12■□□□□ 0.97
KRCC1-201ENST00000347055 PDIA3P30101 505 aaKnown RBP21.12■□□□□ 0.97
KRCC1-201ENST00000347055 CYP2C19P33261 490 aa21.12■□□□□ 0.97
KRCC1-201ENST00000347055 TMC6Q7Z403 805 aa21.12■□□□□ 0.97
KRCC1-201ENST00000347055 FHOD1Q9Y613 1164 aa21.12■□□□□ 0.97
KRCC1-201ENST00000347055 DDX60Q8IY21 1712 aaKnown RBP21.11■□□□□ 0.97
KRCC1-201ENST00000347055 AFDNP55196 1824 aaKnown RBP21.11■□□□□ 0.97
KRCC1-201ENST00000347055 ZRANB2O95218 330 aaKnown RBP eCLIP21.11■□□□□ 0.97
KRCC1-201ENST00000347055 SMC2O95347 1197 aa21.11■□□□□ 0.97
KRCC1-201ENST00000347055 TEX35Q5T0J7 233 aa21.11■□□□□ 0.97
KRCC1-201ENST00000347055 IFNKQ9P0W0 207 aa21.11■□□□□ 0.97
KRCC1-201ENST00000347055 DNAI1Q9UI46 699 aa21.11■□□□□ 0.97
KRCC1-201ENST00000347055 NEDD4P46934 1319 aa21.11■□□□□ 0.97
KRCC1-201ENST00000347055 EFCAB8A8MWE9 144 aa21.1■□□□□ 0.97
KRCC1-201ENST00000347055 SLC3A2P08195 630 aaKnown RBP21.1■□□□□ 0.97
KRCC1-201ENST00000347055 APOBRQ0VD83 1088 aa21.1■□□□□ 0.97
KRCC1-201ENST00000347055 STK38Q15208 465 aa21.1■□□□□ 0.97
KRCC1-201ENST00000347055 ZMYM1Q5SVZ6 1142 aa21.1■□□□□ 0.97
KRCC1-201ENST00000347055 THEMISQ8N1K5 641 aaPredicted RBP21.1■□□□□ 0.97
KRCC1-201ENST00000347055 SCN11AQ9UI33 1791 aa21.1■□□□□ 0.97
KRCC1-201ENST00000347055 WDR19Q8NEZ3 1342 aa21.1■□□□□ 0.97
KRCC1-201ENST00000347055 CMA1P23946 247 aa21.1■□□□□ 0.97
KRCC1-201ENST00000347055 CLCN6P51797 869 aa21.1■□□□□ 0.97
KRCC1-201ENST00000347055 TFCP2Q12800 502 aa21.1■□□□□ 0.97
KRCC1-201ENST00000347055 SF3A1Q15459 793 aaKnown RBP21.1■□□□□ 0.97
KRCC1-201ENST00000347055 LRRFIP1Q32MZ4 808 aaKnown RBP21.1■□□□□ 0.97
KRCC1-201ENST00000347055 DPCR1Q3MIW9 517 aa21.1■□□□□ 0.97
KRCC1-201ENST00000347055 TMCO3Q6UWJ1 677 aa21.1■□□□□ 0.97
KRCC1-201ENST00000347055 SYT10Q6XYQ8 523 aa21.1■□□□□ 0.97
KRCC1-201ENST00000347055 ANKRD24Q8TF21 1146 aa21.1■□□□□ 0.97
KRCC1-201ENST00000347055 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.1■□□□□ 0.97
KRCC1-201ENST00000347055 TMX1Q9H3N1 280 aa21.1■□□□□ 0.97
KRCC1-201ENST00000347055 E7EWF7 191 aa21.09■□□□□ 0.97
KRCC1-201ENST00000347055 ZSCAN12O43309 604 aa21.09■□□□□ 0.97
KRCC1-201ENST00000347055 PNMA6AP0CW24 399 aaPredicted RBP21.09■□□□□ 0.97
KRCC1-201ENST00000347055 NDUFA8P51970 172 aa21.09■□□□□ 0.97
KRCC1-201ENST00000347055 NCAPHQ15003 741 aa21.09■□□□□ 0.97
KRCC1-201ENST00000347055 ERCC6LQ2NKX8 1250 aa21.09■□□□□ 0.97
KRCC1-201ENST00000347055 CCDC158Q5M9N0 1113 aa21.09■□□□□ 0.97
KRCC1-201ENST00000347055 UBXN4Q92575 508 aa21.09■□□□□ 0.97
KRCC1-201ENST00000347055 FTOQ9C0B1 505 aaKnown RBP eCLIP21.09■□□□□ 0.97
KRCC1-201ENST00000347055 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.09■□□□□ 0.97
KRCC1-201ENST00000347055 V9GYY5 206 aaPredicted RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms