RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 FSIP1Q8NA03 581 aa12.51□□□□□ -0.41
CLCN6-202ENST00000346436 PRKAG2Q9UGJ0 569 aa12.51□□□□□ -0.41
CLCN6-202ENST00000346436 GGA1Q9UJY5 639 aa12.51□□□□□ -0.41
CLCN6-202ENST00000346436 PICALMQ13492 652 aa12.51□□□□□ -0.41
CLCN6-202ENST00000346436 COPS6Q7L5N1 327 aa12.51□□□□□ -0.41
CLCN6-202ENST00000346436 KRT27Q7Z3Y8 459 aa12.51□□□□□ -0.41
CLCN6-202ENST00000346436 USP37Q86T82 979 aa12.51□□□□□ -0.41
CLCN6-202ENST00000346436 DCPSQ96C86 337 aaKnown RBP12.51□□□□□ -0.41
CLCN6-202ENST00000346436 LGR6Q9HBX8 967 aa12.51□□□□□ -0.41
CLCN6-202ENST00000346436 SBNO2Q9Y2G9 1366 aa12.51□□□□□ -0.41
CLCN6-202ENST00000346436 EDC4Q6P2E9 1401 aaKnown RBP12.51□□□□□ -0.41
CLCN6-202ENST00000346436 ZMYND15Q9H091 742 aa12.51□□□□□ -0.41
CLCN6-202ENST00000346436 ARGLU1Q9NWB6 273 aaPredicted RBP12.51□□□□□ -0.41
CLCN6-202ENST00000346436 ADCY10Q96PN6 1610 aa12.51□□□□□ -0.41
CLCN6-202ENST00000346436 HOXC9P31274 260 aa12.51□□□□□ -0.41
CLCN6-202ENST00000346436 UBE2Q2Q8WVN8 375 aa12.51□□□□□ -0.41
CLCN6-202ENST00000346436 DEF6Q9H4E7 631 aa12.51□□□□□ -0.41
CLCN6-202ENST00000346436 WDR70Q9NW82 654 aa12.51□□□□□ -0.41
CLCN6-202ENST00000346436 NDUFB9Q9Y6M9 179 aa12.51□□□□□ -0.41
CLCN6-202ENST00000346436 ERLIN2O94905 339 aa12.51□□□□□ -0.41
CLCN6-202ENST00000346436 CLTCL1P53675 1640 aa12.51□□□□□ -0.41
CLCN6-202ENST00000346436 IFIT3O14879 490 aaKnown RBP12.5□□□□□ -0.41
CLCN6-202ENST00000346436 ATP2B3Q16720 1220 aa12.5□□□□□ -0.41
CLCN6-202ENST00000346436 SEPT11Q9NVA2 429 aaKnown RBP12.5□□□□□ -0.41
CLCN6-202ENST00000346436 GRM8O00222 908 aa12.5□□□□□ -0.41
CLCN6-202ENST00000346436 FGFR1OPO95684 399 aaKnown RBP12.5□□□□□ -0.41
CLCN6-202ENST00000346436 ZFYP08048 801 aaPredicted RBP12.5□□□□□ -0.41
CLCN6-202ENST00000346436 LRRC27Q9C0I9 530 aa12.5□□□□□ -0.41
CLCN6-202ENST00000346436 DNAJC25Q9H1X3 360 aa12.5□□□□□ -0.41
CLCN6-202ENST00000346436 CCDC186Q7Z3E2 898 aa12.5□□□□□ -0.41
CLCN6-202ENST00000346436 PLXNC1O60486 1568 aa12.5□□□□□ -0.41
CLCN6-202ENST00000346436 PABPN1LA6NDY0 278 aaKnown RBP12.5□□□□□ -0.41
CLCN6-202ENST00000346436 NLRP5P59047 1200 aa12.5□□□□□ -0.41
CLCN6-202ENST00000346436 SULF1Q8IWU6 871 aa12.5□□□□□ -0.41
CLCN6-202ENST00000346436 PLCD3Q8N3E9 789 aa12.5□□□□□ -0.41
CLCN6-202ENST00000346436 C8orf76Q96K31 380 aa12.5□□□□□ -0.41
CLCN6-202ENST00000346436 SNX14Q9Y5W7 946 aa12.5□□□□□ -0.41
CLCN6-202ENST00000346436 RTL1A6NKG5 1358 aa12.5□□□□□ -0.41
CLCN6-202ENST00000346436 LDHBP07195 334 aaKnown RBP12.49□□□□□ -0.41
CLCN6-202ENST00000346436 CREB3L3Q68CJ9 461 aa12.49□□□□□ -0.41
CLCN6-202ENST00000346436 Q6ZUG5 572 aa12.49□□□□□ -0.41
CLCN6-202ENST00000346436 MAP3K5Q99683 1374 aa12.49□□□□□ -0.41
CLCN6-202ENST00000346436 UFL1O94874 794 aa12.49□□□□□ -0.41
CLCN6-202ENST00000346436 PTPN14Q15678 1187 aa12.49□□□□□ -0.41
CLCN6-202ENST00000346436 CFAP100Q494V2 611 aa12.49□□□□□ -0.41
CLCN6-202ENST00000346436 IP6K1Q92551 441 aa12.49□□□□□ -0.41
CLCN6-202ENST00000346436 ZHX1Q9UKY1 873 aaPredicted RBP12.49□□□□□ -0.41
CLCN6-202ENST00000346436 IQGAP3Q86VI3 1631 aa12.49□□□□□ -0.41
CLCN6-202ENST00000346436 MCM5P33992 734 aa12.49□□□□□ -0.41
CLCN6-202ENST00000346436 MFSD6Q6ZSS7 791 aa12.49□□□□□ -0.41
CLCN6-202ENST00000346436 CAGE1Q8TC20 777 aa12.49□□□□□ -0.41
CLCN6-202ENST00000346436 LIG1P18858 919 aa12.49□□□□□ -0.41
CLCN6-202ENST00000346436 CYP7A1P22680 504 aa12.49□□□□□ -0.41
CLCN6-202ENST00000346436 KSR2Q6VAB6 950 aa12.49□□□□□ -0.41
CLCN6-202ENST00000346436 GPT2Q8TD30 523 aa12.49□□□□□ -0.41
CLCN6-202ENST00000346436 SMCR8Q8TEV9 937 aaPredicted RBP12.49□□□□□ -0.41
CLCN6-202ENST00000346436 LRRC45Q96CN5 670 aa12.49□□□□□ -0.41
CLCN6-202ENST00000346436 ZFYVE16Q7Z3T8 1539 aa12.49□□□□□ -0.41
CLCN6-202ENST00000346436 GOLGA8BA8MQT2 603 aa12.48□□□□□ -0.41
CLCN6-202ENST00000346436 LUZP1Q86V48 1076 aa12.48□□□□□ -0.41
CLCN6-202ENST00000346436 FAM227BQ96M60 508 aa12.48□□□□□ -0.41
CLCN6-202ENST00000346436 BICC1Q9H694 974 aaKnown RBP12.48□□□□□ -0.41
CLCN6-202ENST00000346436 DDX19AQ9NUU7 478 aaKnown RBP12.48□□□□□ -0.41
CLCN6-202ENST00000346436 TEX35Q5T0J7 233 aa12.48□□□□□ -0.41
CLCN6-202ENST00000346436 FERMT1Q9BQL6 677 aa12.48□□□□□ -0.41
CLCN6-202ENST00000346436 ACBD3Q9H3P7 528 aa12.48□□□□□ -0.41
CLCN6-202ENST00000346436 ERICH4A6NGS2 130 aa12.48□□□□□ -0.41
CLCN6-202ENST00000346436 IRS4O14654 1257 aaPredicted RBP12.48□□□□□ -0.41
CLCN6-202ENST00000346436 UVSSAQ2YD98 709 aa12.48□□□□□ -0.41
CLCN6-202ENST00000346436 SMARCC2Q8TAQ2 1214 aa12.48□□□□□ -0.41
CLCN6-202ENST00000346436 STX8Q9UNK0 236 aa12.48□□□□□ -0.41
CLCN6-202ENST00000346436 FSD2A1L4K1 749 aa12.48□□□□□ -0.41
CLCN6-202ENST00000346436 PPIP5K2O43314 1243 aa12.48□□□□□ -0.41
CLCN6-202ENST00000346436 CCDC129Q6ZRS4 1044 aa12.48□□□□□ -0.41
CLCN6-202ENST00000346436 MYOM2P54296 1465 aa12.48□□□□□ -0.41
CLCN6-202ENST00000346436 INTS4Q96HW7 963 aaKnown RBP12.48□□□□□ -0.41
CLCN6-202ENST00000346436 ARHGEF10LQ9HCE6 1279 aa12.48□□□□□ -0.41
CLCN6-202ENST00000346436 EPB41L2O43491 1005 aaKnown RBP12.47□□□□□ -0.41
CLCN6-202ENST00000346436 ALDH1L1O75891 902 aa12.47□□□□□ -0.41
CLCN6-202ENST00000346436 DCAF15Q66K64 600 aa12.47□□□□□ -0.41
CLCN6-202ENST00000346436 UNC5CLQ8IV45 518 aa12.47□□□□□ -0.41
CLCN6-202ENST00000346436 ANO10Q9NW15 660 aa12.47□□□□□ -0.41
CLCN6-202ENST00000346436 PTGS1P23219 599 aa12.47□□□□□ -0.41
CLCN6-202ENST00000346436 IL15P40933 162 aaPredicted RBP12.47□□□□□ -0.41
CLCN6-202ENST00000346436 ZNF445P59923 1031 aa12.47□□□□□ -0.41
CLCN6-202ENST00000346436 IRX3P78415 501 aaPredicted RBP12.47□□□□□ -0.41
CLCN6-202ENST00000346436 SKIDA1Q1XH10 827 aa12.47□□□□□ -0.41
CLCN6-202ENST00000346436 HSP90AA4PQ58FG1 418 aa12.47□□□□□ -0.41
CLCN6-202ENST00000346436 NOM1Q5C9Z4 860 aaKnown RBP12.47□□□□□ -0.41
CLCN6-202ENST00000346436 CALML4Q96GE6 196 aa12.47□□□□□ -0.41
CLCN6-202ENST00000346436 BICD1Q96G01 975 aa12.47□□□□□ -0.41
CLCN6-202ENST00000346436 UBA5Q9GZZ9 404 aa12.47□□□□□ -0.41
CLCN6-202ENST00000346436 AS3MTQ9HBK9 375 aa12.47□□□□□ -0.41
CLCN6-202ENST00000346436 KCNQ3O43525 872 aa12.47□□□□□ -0.41
CLCN6-202ENST00000346436 CCDC148Q8NFR7 591 aa12.47□□□□□ -0.41
CLCN6-202ENST00000346436 GOLGA8AA7E2F4 631 aa12.46□□□□□ -0.41
CLCN6-202ENST00000346436 DYNC1I1O14576 645 aa12.46□□□□□ -0.41
CLCN6-202ENST00000346436 SSRP1Q08945 709 aaKnown RBP12.46□□□□□ -0.41
CLCN6-202ENST00000346436 RUFY3Q7L099 469 aa12.46□□□□□ -0.41
CLCN6-202ENST00000346436 NFATC2IPQ8NCF5 419 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 223 ms