RNA–Protein interactions for RNA: ENST00000346085.9

ARID1B-202, Transcript of AT-rich interaction domain 1B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARID1B, Length 10,194 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-202ENST00000346085 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.7■□□□□ 0.74
ARID1B-202ENST00000346085 TTC39AQ5SRH9 613 aa19.7■□□□□ 0.74
ARID1B-202ENST00000346085 PPP4R3AQ6IN85 833 aa19.7■□□□□ 0.74
ARID1B-202ENST00000346085 TLDC2A0PJX2 215 aa19.7■□□□□ 0.74
ARID1B-202ENST00000346085 KLHL34Q8N239 644 aa19.7■□□□□ 0.74
ARID1B-202ENST00000346085 FNBP4Q8N3X1 1017 aaPredicted RBP19.7■□□□□ 0.74
ARID1B-202ENST00000346085 ZNF280CQ8ND82 737 aa19.7■□□□□ 0.74
ARID1B-202ENST00000346085 TTC21AQ8NDW8 1320 aa19.7■□□□□ 0.74
ARID1B-202ENST00000346085 TSPYL4Q9UJ04 414 aa19.7■□□□□ 0.74
ARID1B-202ENST00000346085 CLTAP09496 248 aa19.69■□□□□ 0.74
ARID1B-202ENST00000346085 HEATR3Q7Z4Q2 680 aa19.69■□□□□ 0.74
ARID1B-202ENST00000346085 RBM27Q9P2N5 1060 aaKnown RBP19.69■□□□□ 0.74
ARID1B-202ENST00000346085 PPP1R1BQ9UD71 204 aaPredicted RBP19.69■□□□□ 0.74
ARID1B-202ENST00000346085 POLE2P56282 527 aa19.69■□□□□ 0.74
ARID1B-202ENST00000346085 CCT6BQ92526 530 aa19.69■□□□□ 0.74
ARID1B-202ENST00000346085 CCT4P50991 539 aaKnown RBP19.69■□□□□ 0.74
ARID1B-202ENST00000346085 SEC63Q9UGP8 760 aaKnown RBP19.69■□□□□ 0.74
ARID1B-202ENST00000346085 LIG3P49916 1009 aa19.69■□□□□ 0.74
ARID1B-202ENST00000346085 ST20-MTHFSA0A0A6YYL1 179 aa19.69■□□□□ 0.74
ARID1B-202ENST00000346085 CRCPO75575 148 aa19.69■□□□□ 0.74
ARID1B-202ENST00000346085 NECTIN2Q92692 538 aa19.69■□□□□ 0.74
ARID1B-202ENST00000346085 ELF2Q15723 593 aa19.69■□□□□ 0.74
ARID1B-202ENST00000346085 MCTP2Q6DN12 878 aa19.69■□□□□ 0.74
ARID1B-202ENST00000346085 ENAHQ8N8S7 591 aaPredicted RBP19.69■□□□□ 0.74
ARID1B-202ENST00000346085 GFM2Q969S9 779 aaKnown RBP19.69■□□□□ 0.74
ARID1B-202ENST00000346085 FERMT3Q86UX7 667 aa19.69■□□□□ 0.74
ARID1B-202ENST00000346085 HNRNPMP52272 730 aaKnown RBP eCLIP19.68■□□□□ 0.746e-7■■■■■ 27.1
ARID1B-202ENST00000346085 RIC3Q7Z5B4 369 aa19.68■□□□□ 0.74
ARID1B-202ENST00000346085 STXBP4Q6ZWJ1 553 aa19.68■□□□□ 0.74
ARID1B-202ENST00000346085 RIOK3O14730 519 aaKnown RBP19.68■□□□□ 0.74
ARID1B-202ENST00000346085 ZNF76P36508 570 aa19.68■□□□□ 0.74
ARID1B-202ENST00000346085 DDX21Q9NR30 783 aaKnown RBP eCLIP19.68■□□□□ 0.74
ARID1B-202ENST00000346085 ARMC2Q8NEN0 867 aa19.68■□□□□ 0.74
ARID1B-202ENST00000346085 DEUP1Q05D60 604 aa19.68■□□□□ 0.74
ARID1B-202ENST00000346085 SYT10Q6XYQ8 523 aa19.68■□□□□ 0.74
ARID1B-202ENST00000346085 SCHIP1Q9P0W5 487 aaPredicted RBP19.68■□□□□ 0.74
ARID1B-202ENST00000346085 ZNF569Q5MCW4 686 aa19.67■□□□□ 0.74
ARID1B-202ENST00000346085 BIN1O00499 593 aa19.67■□□□□ 0.74
ARID1B-202ENST00000346085 KLHL14Q9P2G3 628 aa19.67■□□□□ 0.74
ARID1B-202ENST00000346085 ZSCAN16Q9H4T2 348 aaPredicted RBP19.67■□□□□ 0.74
ARID1B-202ENST00000346085 HNRNPCP07910 306 aaKnown RBP eCLIP19.67■□□□□ 0.742e-6■■■□□ 18.7
ARID1B-202ENST00000346085 SDCCAG3Q96C92 435 aa19.67■□□□□ 0.74
ARID1B-202ENST00000346085 EEF1DP29692 281 aaKnown RBP19.67■□□□□ 0.74
ARID1B-202ENST00000346085 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.67■□□□□ 0.74
ARID1B-202ENST00000346085 ANKRD20A3Q5VUR7 823 aa19.67■□□□□ 0.74
ARID1B-202ENST00000346085 RNF40O75150 1001 aa19.66■□□□□ 0.74
ARID1B-202ENST00000346085 NBPF6Q5VWK0 638 aa19.66■□□□□ 0.74
ARID1B-202ENST00000346085 NBPF5PQ86XG9 351 aaPredicted RBP19.66■□□□□ 0.74
ARID1B-202ENST00000346085 NBPF4Q96M43 638 aa19.66■□□□□ 0.74
ARID1B-202ENST00000346085 RAD50Q92878 1312 aa19.66■□□□□ 0.74
ARID1B-202ENST00000346085 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.66■□□□□ 0.74
ARID1B-202ENST00000346085 C8orf74Q6P047 294 aa19.66■□□□□ 0.74
ARID1B-202ENST00000346085 RPSAP08865 295 aaKnown RBP19.66■□□□□ 0.74
ARID1B-202ENST00000346085 LTV1Q96GA3 475 aaPredicted RBP19.66■□□□□ 0.74
ARID1B-202ENST00000346085 CSRNP2Q9H175 543 aa19.66■□□□□ 0.74
ARID1B-202ENST00000346085 WDHD1O75717 1129 aaPredicted RBP19.66■□□□□ 0.74
ARID1B-202ENST00000346085 CWC27Q6UX04 472 aaKnown RBP19.66■□□□□ 0.74
ARID1B-202ENST00000346085 PDZD8Q8NEN9 1154 aa19.66■□□□□ 0.74
ARID1B-202ENST00000346085 UBA5Q9GZZ9 404 aa19.66■□□□□ 0.74
ARID1B-202ENST00000346085 SKIP12755 728 aa19.66■□□□□ 0.74
ARID1B-202ENST00000346085 SIL1Q9H173 461 aa19.66■□□□□ 0.74
ARID1B-202ENST00000346085 GUCA1BQ9UMX6 200 aa19.66■□□□□ 0.74
ARID1B-202ENST00000346085 A0A087WZG4 1122 aa19.65■□□□□ 0.74
ARID1B-202ENST00000346085 CNGA4Q8IV77 575 aa19.65■□□□□ 0.74
ARID1B-202ENST00000346085 DYTNA2CJ06 578 aa19.65■□□□□ 0.74
ARID1B-202ENST00000346085 FAM177BA6PVY3 158 aa19.65■□□□□ 0.74
ARID1B-202ENST00000346085 CCDC122Q5T0U0 273 aa19.65■□□□□ 0.74
ARID1B-202ENST00000346085 LRRC27Q9C0I9 530 aa19.65■□□□□ 0.74
ARID1B-202ENST00000346085 NGDNQ8NEJ9 315 aaKnown RBP19.65■□□□□ 0.74
ARID1B-202ENST00000346085 NAPGQ99747 312 aaPredicted RBP19.65■□□□□ 0.74
ARID1B-202ENST00000346085 ATG3Q9NT62 314 aa19.65■□□□□ 0.74
ARID1B-202ENST00000346085 A0A1B0GW55 424 aa19.65■□□□□ 0.74
ARID1B-202ENST00000346085 DUX4L2P0CJ85 424 aa19.65■□□□□ 0.74
ARID1B-202ENST00000346085 DUX4L3P0CJ86 424 aa19.65■□□□□ 0.74
ARID1B-202ENST00000346085 DUX4L4P0CJ87 422 aa19.65■□□□□ 0.74
ARID1B-202ENST00000346085 DUX4L5P0CJ88 424 aa19.65■□□□□ 0.74
ARID1B-202ENST00000346085 DUX4L6P0CJ89 424 aa19.65■□□□□ 0.74
ARID1B-202ENST00000346085 DUX4L7P0CJ90 424 aa19.65■□□□□ 0.74
ARID1B-202ENST00000346085 KRT10P13645 584 aa19.65■□□□□ 0.74
ARID1B-202ENST00000346085 DUX4Q9UBX2 424 aa19.65■□□□□ 0.74
ARID1B-202ENST00000346085 BASP1P80723 227 aaKnown RBP19.64■□□□□ 0.74
ARID1B-202ENST00000346085 CCDC89Q8N998 374 aa19.64■□□□□ 0.74
ARID1B-202ENST00000346085 WRNQ14191 1432 aaPredicted RBP eCLIP19.64■□□□□ 0.74
ARID1B-202ENST00000346085 KRT75O95678 551 aa19.64■□□□□ 0.74
ARID1B-202ENST00000346085 COPG1Q9Y678 874 aaKnown RBP19.64■□□□□ 0.74
ARID1B-202ENST00000346085 ELP1O95163 1332 aa19.64■□□□□ 0.73
ARID1B-202ENST00000346085 TRIM47Q96LD4 638 aa19.64■□□□□ 0.73
ARID1B-202ENST00000346085 DENND2CQ68D51 928 aa19.64■□□□□ 0.73
ARID1B-202ENST00000346085 SH2D4AQ9H788 454 aa19.64■□□□□ 0.73
ARID1B-202ENST00000346085 ST13P4Q8IZP2 240 aaPredicted RBP19.64■□□□□ 0.73
ARID1B-202ENST00000346085 BRD3Q15059 726 aa19.64■□□□□ 0.73
ARID1B-202ENST00000346085 ANKRD20A4Q4UJ75 823 aa19.64■□□□□ 0.73
ARID1B-202ENST00000346085 ANKRD20A8PQ5CZ79 823 aa19.64■□□□□ 0.73
ARID1B-202ENST00000346085 ANKRD20A2Q5SQ80 823 aa19.64■□□□□ 0.73
ARID1B-202ENST00000346085 ANKRD20A1Q5TYW2 823 aa19.64■□□□□ 0.73
ARID1B-202ENST00000346085 GEN1Q17RS7 908 aa19.64■□□□□ 0.73
ARID1B-202ENST00000346085 MAP7D3Q8IWC1 876 aa19.64■□□□□ 0.73
ARID1B-202ENST00000346085 SEPT2Q15019 361 aa19.63■□□□□ 0.73
ARID1B-202ENST00000346085 GIMAP6Q6P9H5 292 aa19.63■□□□□ 0.73
ARID1B-202ENST00000346085 TMEM232C9JQI7 657 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms