RNA–Protein interactions for RNA: ENST00000344749.9

TCF3-202, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 4,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-202ENST00000344749 MRPS27Q92552 414 aaKnown RBP15.13■□□□□ 0.01
TCF3-202ENST00000344749 CCDC43Q96MW1 224 aaKnown RBP15.13■□□□□ 0.01
TCF3-202ENST00000344749 ZAP70P43403 619 aa15.13■□□□□ 0.01
TCF3-202ENST00000344749 OSBPL3Q9H4L5 887 aa15.13■□□□□ 0.01
TCF3-202ENST00000344749 AXIN2Q9Y2T1 843 aa15.13■□□□□ 0.01
TCF3-202ENST00000344749 A0A1B0GVL5 298 aa15.12■□□□□ 0.01
TCF3-202ENST00000344749 MPHOSPH10O00566 681 aaKnown RBP15.12■□□□□ 0.01
TCF3-202ENST00000344749 EPS15P42566 896 aa15.12■□□□□ 0.01
TCF3-202ENST00000344749 SMARCE1Q969G3 411 aa15.12■□□□□ 0.01
TCF3-202ENST00000344749 STAP2Q9UGK3 403 aa15.12■□□□□ 0.01
TCF3-202ENST00000344749 CEP131Q9UPN4 1083 aa15.12■□□□□ 0.01
TCF3-202ENST00000344749 AOPEPQ8N6M6 819 aa15.12■□□□□ 0.01
TCF3-202ENST00000344749 PTCH1Q13635 1447 aa15.12■□□□□ 0.01
TCF3-202ENST00000344749 TMEM94Q12767 1356 aa15.12■□□□□ 0.01
TCF3-202ENST00000344749 MBD4O95243 580 aa15.12■□□□□ 0.01
TCF3-202ENST00000344749 MTERF4Q7Z6M4 381 aaKnown RBP15.12■□□□□ 0.01
TCF3-202ENST00000344749 ABCA9Q8IUA7 1624 aa15.12■□□□□ 0.01
TCF3-202ENST00000344749 KDRP35968 1356 aa15.12■□□□□ 0.01
TCF3-202ENST00000344749 QRICH2Q9H0J4 1663 aa15.12■□□□□ 0.01
TCF3-202ENST00000344749 GPAA1O43292 621 aa15.12■□□□□ 0.01
TCF3-202ENST00000344749 TOP1P11387 765 aaKnown RBP15.12■□□□□ 0.01
TCF3-202ENST00000344749 RTN1Q16799 776 aa15.12■□□□□ 0.01
TCF3-202ENST00000344749 CEP89Q96ST8 783 aa15.12■□□□□ 0.01
TCF3-202ENST00000344749 DBNLQ9UJU6 430 aaKnown RBP15.12■□□□□ 0.01
TCF3-202ENST00000344749 SPTLC2O15270 562 aa15.11■□□□□ 0.01
TCF3-202ENST00000344749 LMOD1P29536 600 aaPredicted RBP15.11■□□□□ 0.01
TCF3-202ENST00000344749 TPCN1Q9ULQ1 816 aa15.11■□□□□ 0.01
TCF3-202ENST00000344749 ATP5JP18859 108 aa15.11■□□□□ 0.01
TCF3-202ENST00000344749 CCDC102BQ68D86 513 aa15.11■□□□□ 0.01
TCF3-202ENST00000344749 RPGRQ92834 1020 aaKnown RBP15.11■□□□□ 0.01
TCF3-202ENST00000344749 ERCC4Q92889 916 aaPredicted RBP15.11■□□□□ 0.01
TCF3-202ENST00000344749 MYL10Q9BUA6 226 aa15.11■□□□□ 0.01
TCF3-202ENST00000344749 ERBB3P21860 1342 aa15.11■□□□□ 0.01
TCF3-202ENST00000344749 NOLC1Q14978 699 aaKnown RBP eCLIP15.11■□□□□ 0.01
TCF3-202ENST00000344749 NAA16Q6N069 864 aaPredicted RBP15.11■□□□□ 0.01
TCF3-202ENST00000344749 CCDC70Q6NSX1 233 aa15.11■□□□□ 0.01
TCF3-202ENST00000344749 CAGE1Q8TC20 777 aa15.11■□□□□ 0.01
TCF3-202ENST00000344749 PUS3Q9BZE2 481 aaKnown RBP15.11■□□□□ 0.01
TCF3-202ENST00000344749 TANGO6Q9C0B7 1094 aa15.11■□□□□ 0.01
TCF3-202ENST00000344749 LRRC7Q96NW7 1537 aa15.1■□□□□ 0.01
TCF3-202ENST00000344749 GPS2Q13227 327 aa15.1■□□□□ 0.01
TCF3-202ENST00000344749 STIM1Q13586 685 aa15.1■□□□□ 0.01
TCF3-202ENST00000344749 C17orf53Q8N3J3 647 aaPredicted RBP15.1■□□□□ 0.01
TCF3-202ENST00000344749 GPT2Q8TD30 523 aa15.1■□□□□ 0.01
TCF3-202ENST00000344749 NLRP3Q96P20 1036 aa15.1■□□□□ 0.01
TCF3-202ENST00000344749 RFC4P35249 363 aa15.1■□□□□ 0.01
TCF3-202ENST00000344749 AFMP43652 599 aa15.1■□□□□ 0.01
TCF3-202ENST00000344749 SETDB2Q96T68 719 aa15.1■□□□□ 0.01
TCF3-202ENST00000344749 LSG1Q9H089 658 aaKnown RBP15.1■□□□□ 0.01
TCF3-202ENST00000344749 ZNF445P59923 1031 aa15.1■□□□□ 0.01
TCF3-202ENST00000344749 HELLSQ9NRZ9 838 aa15.1■□□□□ 0.01
TCF3-202ENST00000344749 CCDC194A0A1B0GVG4 234 aa15.09■□□□□ 0.01
TCF3-202ENST00000344749 PTGS1P23219 599 aa15.09■□□□□ 0.01
TCF3-202ENST00000344749 AEBP2Q6ZN18 517 aaPredicted RBP15.09■□□□□ 0.01
TCF3-202ENST00000344749 KCNG4Q8TDN1 519 aa15.09■□□□□ 0.01
TCF3-202ENST00000344749 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.09■□□□□ 0.01
TCF3-202ENST00000344749 PRDM1O75626 825 aa15.09■□□□□ 0.01
TCF3-202ENST00000344749 PDCL2Q8N4E4 241 aa15.09■□□□□ 0.01
TCF3-202ENST00000344749 ESR2Q92731 530 aa15.09■□□□□ 0.01
TCF3-202ENST00000344749 ARMT1Q9H993 441 aa15.09■□□□□ 0.01
TCF3-202ENST00000344749 ASAP1Q9ULH1 1129 aa15.09■□□□□ 0.01
TCF3-202ENST00000344749 SH3TC1Q8TE82 1336 aa15.09■□□□□ 0.01
TCF3-202ENST00000344749 URI1O94763 535 aaPredicted RBP15.09■□□□□ 0.01
TCF3-202ENST00000344749 AK7Q96M32 723 aa15.09■□□□□ 0.01
TCF3-202ENST00000344749 ZNF589Q86UQ0 364 aaPredicted RBP15.08■□□□□ 0
TCF3-202ENST00000344749 APPBP2Q92624 585 aa15.08■□□□□ 0
TCF3-202ENST00000344749 CCP110O43303 1012 aa15.08■□□□□ 0
TCF3-202ENST00000344749 TCIRG1Q13488 830 aa15.08■□□□□ 0
TCF3-202ENST00000344749 IFIT1BQ5T764 474 aaKnown RBP15.08■□□□□ 0
TCF3-202ENST00000344749 KRT23Q9C075 422 aa15.08■□□□□ 0
TCF3-202ENST00000344749 F8W031 263 aaPredicted RBP15.08■□□□□ 0
TCF3-202ENST00000344749 SASH1O94885 1247 aa15.07■□□□□ 0
TCF3-202ENST00000344749 EIF5P55010 431 aaKnown RBP15.07■□□□□ 0
TCF3-202ENST00000344749 MAPK8IP2Q13387 824 aaPredicted RBP15.07■□□□□ 0
TCF3-202ENST00000344749 ZNHIT6Q9NWK9 470 aaKnown RBP15.07■□□□□ 0
TCF3-202ENST00000344749 KIF18AQ8NI77 898 aa15.07■□□□□ 0
TCF3-202ENST00000344749 LEO1Q8WVC0 666 aaPredicted RBP15.07■□□□□ 0
TCF3-202ENST00000344749 PHKBQ93100 1093 aa15.07■□□□□ 0
TCF3-202ENST00000344749 SEC63Q9UGP8 760 aaKnown RBP15.07■□□□□ 0
TCF3-202ENST00000344749 SKILP12757 684 aa15.06■□□□□ 0
TCF3-202ENST00000344749 PDE4BQ07343 736 aa15.06■□□□□ 0
TCF3-202ENST00000344749 MTMR6Q9Y217 621 aa15.06■□□□□ 0
TCF3-202ENST00000344749 PTPRMP28827 1452 aa15.06■□□□□ 0
TCF3-202ENST00000344749 UBAP1LF5GYI3 381 aa15.06■□□□□ 0
TCF3-202ENST00000344749 ARHGAP29Q52LW3 1261 aa15.06■□□□□ 0
TCF3-202ENST00000344749 TM6SF1Q9BZW5 370 aa15.06■□□□□ 0
TCF3-202ENST00000344749 KAT14Q9H8E8 782 aa15.06■□□□□ 0
TCF3-202ENST00000344749 PRDM10Q9NQV6 1147 aa15.06■□□□□ 0
TCF3-202ENST00000344749 ARHGEF40Q8TER5 1519 aa15.06■□□□□ 0
TCF3-202ENST00000344749 MAGEB6P1A0A0J9YX57 407 aa15.06■□□□□ 0
TCF3-202ENST00000344749 E7EWF7 191 aa15.06■□□□□ 0
TCF3-202ENST00000344749 EPB41L2O43491 1005 aaKnown RBP15.06■□□□□ 0
TCF3-202ENST00000344749 CBX1P83916 185 aa15.06■□□□□ 0
TCF3-202ENST00000344749 CRACR2BQ8N4Y2 399 aaPredicted RBP15.06■□□□□ 0
TCF3-202ENST00000344749 CRNKL1Q9BZJ0 848 aaKnown RBP15.06■□□□□ 0
TCF3-202ENST00000344749 DEF6Q9H4E7 631 aa15.06■□□□□ 0
TCF3-202ENST00000344749 ZSWIM6Q9HCJ5 1215 aa15.06■□□□□ 0
TCF3-202ENST00000344749 NSFL1CQ9UNZ2 370 aaKnown RBP15.06■□□□□ 0
TCF3-202ENST00000344749 EPHA10Q5JZY3 1008 aa15.06■□□□□ 0
TCF3-202ENST00000344749 UBXN4Q92575 508 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms