RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 ANKRD44Q8N8A2 993 aa20.17■□□□□ 0.82
ATG4B-201ENST00000344376 JMYQ8N9B5 988 aa20.17■□□□□ 0.82
ATG4B-201ENST00000344376 ARHGAP45Q92619 1136 aa20.17■□□□□ 0.82
ATG4B-201ENST00000344376 SCN9AQ15858 1988 aa20.17■□□□□ 0.82
ATG4B-201ENST00000344376 IPO8O15397 1037 aaKnown RBP20.17■□□□□ 0.82
ATG4B-201ENST00000344376 PLIN1O60240 522 aa20.17■□□□□ 0.82
ATG4B-201ENST00000344376 KLRK1P26718 216 aa20.17■□□□□ 0.82
ATG4B-201ENST00000344376 RBM26Q5T8P6 1007 aaKnown RBP20.17■□□□□ 0.82
ATG4B-201ENST00000344376 TXNRD3Q86VQ6 643 aa20.17■□□□□ 0.82
ATG4B-201ENST00000344376 HDAC5Q9UQL6 1122 aa20.17■□□□□ 0.82
ATG4B-201ENST00000344376 MYO3BQ8WXR4 1341 aa20.16■□□□□ 0.82
ATG4B-201ENST00000344376 USP17L8P0C7I0 530 aa20.16■□□□□ 0.82
ATG4B-201ENST00000344376 UBTFL1P0CB47 393 aaPredicted RBP20.16■□□□□ 0.82
ATG4B-201ENST00000344376 KIF4BQ2VIQ3 1234 aa20.16■□□□□ 0.82
ATG4B-201ENST00000344376 STRIP1Q5VSL9 837 aa20.16■□□□□ 0.82
ATG4B-201ENST00000344376 C15orf52Q6ZUT6 534 aaKnown RBP20.16■□□□□ 0.82
ATG4B-201ENST00000344376 ZNF804AQ7Z570 1209 aa20.16■□□□□ 0.82
ATG4B-201ENST00000344376 MKRN1Q9UHC7 482 aaKnown RBP20.16■□□□□ 0.82
ATG4B-201ENST00000344376 ZNF280AP59817 542 aaPredicted RBP20.15■□□□□ 0.82
ATG4B-201ENST00000344376 CDC37L1Q7L3B6 337 aa20.15■□□□□ 0.82
ATG4B-201ENST00000344376 ABT1Q9ULW3 272 aaKnown RBP20.15■□□□□ 0.82
ATG4B-201ENST00000344376 ZBED9Q6R2W3 1325 aa20.14■□□□□ 0.82
ATG4B-201ENST00000344376 MROH5Q6ZUA9 1318 aa20.14■□□□□ 0.82
ATG4B-201ENST00000344376 TRAF5O00463 557 aa20.14■□□□□ 0.81
ATG4B-201ENST00000344376 DACT2Q5SW24 774 aa20.14■□□□□ 0.81
ATG4B-201ENST00000344376 GLIS2Q9BZE0 524 aaPredicted RBP20.14■□□□□ 0.81
ATG4B-201ENST00000344376 CNTNAP1P78357 1384 aa20.14■□□□□ 0.81
ATG4B-201ENST00000344376 PSME4Q14997 1843 aa20.13■□□□□ 0.81
ATG4B-201ENST00000344376 SNAP23O00161 211 aa20.13■□□□□ 0.81
ATG4B-201ENST00000344376 TTLL5Q6EMB2 1281 aa20.13■□□□□ 0.81
ATG4B-201ENST00000344376 OGFOD1Q8N543 542 aa20.13■□□□□ 0.81
ATG4B-201ENST00000344376 DCPSQ96C86 337 aaKnown RBP20.13■□□□□ 0.81
ATG4B-201ENST00000344376 GMLQ99445 158 aa20.13■□□□□ 0.81
ATG4B-201ENST00000344376 CD209Q9NNX6 404 aa20.13■□□□□ 0.81
ATG4B-201ENST00000344376 EGFRP00533 1210 aa20.12■□□□□ 0.81
ATG4B-201ENST00000344376 UBE4AQ14139 1066 aa20.12■□□□□ 0.81
ATG4B-201ENST00000344376 PUS3Q9BZE2 481 aaKnown RBP20.12■□□□□ 0.81
ATG4B-201ENST00000344376 MMP14P50281 582 aa20.12■□□□□ 0.81
ATG4B-201ENST00000344376 METTL24Q5JXM2 366 aa20.12■□□□□ 0.81
ATG4B-201ENST00000344376 FRAT1Q92837 279 aaPredicted RBP20.12■□□□□ 0.81
ATG4B-201ENST00000344376 MYOZ2Q9NPC6 264 aa20.12■□□□□ 0.81
ATG4B-201ENST00000344376 RIPOR2Q9Y4F9 1068 aa20.12■□□□□ 0.81
ATG4B-201ENST00000344376 IRS2Q9Y4H2 1338 aa20.11■□□□□ 0.81
ATG4B-201ENST00000344376 CELF2O95319 508 aaKnown RBP20.11■□□□□ 0.81
ATG4B-201ENST00000344376 GTF2IP78347 998 aa20.11■□□□□ 0.81
ATG4B-201ENST00000344376 FMR1Q06787 632 aaKnown RBP eCLIP20.11■□□□□ 0.81
ATG4B-201ENST00000344376 KRT26Q7Z3Y9 468 aa20.11■□□□□ 0.81
ATG4B-201ENST00000344376 A0A1B0GUL6 1792 aa20.11■□□□□ 0.81
ATG4B-201ENST00000344376 RASSF10A6NK89 507 aa20.1■□□□□ 0.81
ATG4B-201ENST00000344376 BCAR3O75815 825 aa20.1■□□□□ 0.81
ATG4B-201ENST00000344376 INTS3Q68E01 1043 aaKnown RBP20.1■□□□□ 0.81
ATG4B-201ENST00000344376 ATF7IPQ6VMQ6 1270 aa20.1■□□□□ 0.81
ATG4B-201ENST00000344376 USP48Q86UV5 1035 aa20.1■□□□□ 0.81
ATG4B-201ENST00000344376 GGA3Q9NZ52 723 aa20.1■□□□□ 0.81
ATG4B-201ENST00000344376 HDAC9Q9UKV0 1011 aa20.1■□□□□ 0.81
ATG4B-201ENST00000344376 IL1R1P14778 569 aa20.09■□□□□ 0.81
ATG4B-201ENST00000344376 DEFB115Q30KQ5 88 aa20.09■□□□□ 0.81
ATG4B-201ENST00000344376 SULF1Q8IWU6 871 aa20.09■□□□□ 0.81
ATG4B-201ENST00000344376 MXD3Q9BW11 206 aa20.09■□□□□ 0.81
ATG4B-201ENST00000344376 ZNF408Q9H9D4 720 aa20.09■□□□□ 0.81
ATG4B-201ENST00000344376 GNAI3P08754 354 aa20.08■□□□□ 0.81
ATG4B-201ENST00000344376 TRIM27P14373 513 aa20.08■□□□□ 0.81
ATG4B-201ENST00000344376 SCARF1Q14162 830 aa20.08■□□□□ 0.81
ATG4B-201ENST00000344376 LRRC24Q50LG9 513 aa20.08■□□□□ 0.81
ATG4B-201ENST00000344376 CST9Q5W186 159 aa20.08■□□□□ 0.81
ATG4B-201ENST00000344376 KLHDC4Q8TBB5 520 aa20.08■□□□□ 0.81
ATG4B-201ENST00000344376 LRRFIP2Q9Y608 721 aaKnown RBP20.08■□□□□ 0.81
ATG4B-201ENST00000344376 MEIS3Q99687 375 aa20.08■□□□□ 0.8
ATG4B-201ENST00000344376 HIBADHP31937 336 aaKnown RBP20.07■□□□□ 0.8
ATG4B-201ENST00000344376 VEGFBP49765 207 aa20.07■□□□□ 0.8
ATG4B-201ENST00000344376 ANGEL2Q5VTE6 544 aaKnown RBP20.07■□□□□ 0.8
ATG4B-201ENST00000344376 ZKSCAN2Q63HK3 967 aa20.07■□□□□ 0.8
ATG4B-201ENST00000344376 PAXIP1Q6ZW49 1069 aaPredicted RBP20.07■□□□□ 0.8
ATG4B-201ENST00000344376 VPS37DQ86XT2 251 aa20.07■□□□□ 0.8
ATG4B-201ENST00000344376 KIAA0825Q8IV33 1275 aa20.07■□□□□ 0.8
ATG4B-201ENST00000344376 TLL2Q9Y6L7 1015 aa20.07■□□□□ 0.8
ATG4B-201ENST00000344376 TRPM7Q96QT4 1865 aa20.06■□□□□ 0.8
ATG4B-201ENST00000344376 EYA2O00167 538 aa20.06■□□□□ 0.8
ATG4B-201ENST00000344376 PDE8BO95263 885 aa20.06■□□□□ 0.8
ATG4B-201ENST00000344376 ADM5C9JUS6 153 aa20.05■□□□□ 0.8
ATG4B-201ENST00000344376 ECE1P42892 770 aa20.05■□□□□ 0.8
ATG4B-201ENST00000344376 GYG1P46976 350 aa20.05■□□□□ 0.8
ATG4B-201ENST00000344376 RFX5P48382 616 aaPredicted RBP20.05■□□□□ 0.8
ATG4B-201ENST00000344376 FKBP1AP62942 108 aaKnown RBP20.05■□□□□ 0.8
ATG4B-201ENST00000344376 CAVIN4Q5BKX8 364 aa20.05■□□□□ 0.8
ATG4B-201ENST00000344376 FBXO3Q9UK99 471 aa20.05■□□□□ 0.8
ATG4B-201ENST00000344376 PITPNM2Q9BZ72 1349 aa20.05■□□□□ 0.8
ATG4B-201ENST00000344376 SASH1O94885 1247 aa20.04■□□□□ 0.8
ATG4B-201ENST00000344376 PTPN12Q05209 780 aaKnown RBP20.04■□□□□ 0.8
ATG4B-201ENST00000344376 PUM3Q15397 648 aaKnown RBP20.04■□□□□ 0.8
ATG4B-201ENST00000344376 VGLL2Q8N8G2 317 aa20.04■□□□□ 0.8
ATG4B-201ENST00000344376 CLUAP1Q96AJ1 413 aa20.04■□□□□ 0.8
ATG4B-201ENST00000344376 ASTN2O75129 1339 aaPredicted RBP20.04■□□□□ 0.8
ATG4B-201ENST00000344376 IFIT1P09914 478 aaKnown RBP20.04■□□□□ 0.8
ATG4B-201ENST00000344376 FAM84BQ96KN1 310 aaPredicted RBP20.04■□□□□ 0.8
ATG4B-201ENST00000344376 ZNF646O15015 1829 aaPredicted RBP20.03■□□□□ 0.8
ATG4B-201ENST00000344376 CIAO1O76071 339 aa20.03■□□□□ 0.8
ATG4B-201ENST00000344376 HSPA1AP0DMV8 641 aaKnown RBP20.03■□□□□ 0.8
ATG4B-201ENST00000344376 HSPA1BP0DMV9 641 aaKnown RBP20.03■□□□□ 0.8
ATG4B-201ENST00000344376 SAPCD2Q86UD0 394 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms