RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 KIAA1328Q86T90 577 aa12.52□□□□□ -0.41
RPL28-201ENST00000344063 CERS3Q8IU89 383 aa12.52□□□□□ -0.41
RPL28-201ENST00000344063 RGS12O14924 1447 aa12.51□□□□□ -0.41
RPL28-201ENST00000344063 MINDY4BA8MYZ0 360 aa12.51□□□□□ -0.41
RPL28-201ENST00000344063 KCNA6P17658 529 aa12.51□□□□□ -0.41
RPL28-201ENST00000344063 CDK12Q9NYV4 1490 aaPredicted RBP12.51□□□□□ -0.41
RPL28-201ENST00000344063 IQCA1Q86XH1 822 aa12.51□□□□□ -0.41
RPL28-201ENST00000344063 GIMAP7Q8NHV1 300 aa12.51□□□□□ -0.41
RPL28-201ENST00000344063 SPTLC2O15270 562 aa12.51□□□□□ -0.41
RPL28-201ENST00000344063 UQCRFS1P1P0C7P4 283 aa12.51□□□□□ -0.41
RPL28-201ENST00000344063 MARCKSP29966 332 aaPredicted RBP12.51□□□□□ -0.41
RPL28-201ENST00000344063 EVCP57679 992 aa12.51□□□□□ -0.41
RPL28-201ENST00000344063 TFCP2Q12800 502 aa12.51□□□□□ -0.41
RPL28-201ENST00000344063 ERCC6LQ2NKX8 1250 aa12.51□□□□□ -0.41
RPL28-201ENST00000344063 SOGA3Q5TF21 947 aa12.51□□□□□ -0.41
RPL28-201ENST00000344063 UTP14AQ9BVJ6 771 aaKnown RBP12.51□□□□□ -0.41
RPL28-201ENST00000344063 SHTN1A0MZ66 631 aa12.5□□□□□ -0.41
RPL28-201ENST00000344063 EIF4A1P60842 406 aaKnown RBP12.5□□□□□ -0.41
RPL28-201ENST00000344063 IQCEQ6IPM2 695 aa12.5□□□□□ -0.41
RPL28-201ENST00000344063 NEK11Q8NG66 645 aa12.5□□□□□ -0.41
RPL28-201ENST00000344063 LLPHQ9BRT6 129 aaKnown RBP12.5□□□□□ -0.41
RPL28-201ENST00000344063 ALG1Q9BT22 464 aa12.5□□□□□ -0.41
RPL28-201ENST00000344063 TMEM2Q9UHN6 1383 aa12.5□□□□□ -0.41
RPL28-201ENST00000344063 RNF187Q5TA31 235 aaPredicted RBP12.5□□□□□ -0.41
RPL28-201ENST00000344063 CCDC144CPQ8IYA2 1237 aa12.5□□□□□ -0.41
RPL28-201ENST00000344063 CTCFLQ8NI51 663 aaPredicted RBP12.5□□□□□ -0.41
RPL28-201ENST00000344063 CARD6Q9BX69 1037 aa12.5□□□□□ -0.41
RPL28-201ENST00000344063 RNF113AO15541 343 aaKnown RBP12.5□□□□□ -0.41
RPL28-201ENST00000344063 UTP14CQ5TAP6 766 aaKnown RBP12.5□□□□□ -0.41
RPL28-201ENST00000344063 FAM107BQ9H098 131 aa12.5□□□□□ -0.41
RPL28-201ENST00000344063 YEATS2Q9ULM3 1422 aa12.5□□□□□ -0.41
RPL28-201ENST00000344063 RNF17Q9BXT8 1623 aaKnown RBP12.5□□□□□ -0.41
RPL28-201ENST00000344063 CHD1O14646 1710 aa12.5□□□□□ -0.41
RPL28-201ENST00000344063 ZBTB43O43298 467 aa12.5□□□□□ -0.41
RPL28-201ENST00000344063 APOBRQ0VD83 1088 aa12.5□□□□□ -0.41
RPL28-201ENST00000344063 ODF2Q5BJF6 829 aa12.5□□□□□ -0.41
RPL28-201ENST00000344063 NFATC2IPQ8NCF5 419 aa12.5□□□□□ -0.41
RPL28-201ENST00000344063 PRC1O43663 620 aa12.49□□□□□ -0.41
RPL28-201ENST00000344063 EIF5P55010 431 aaKnown RBP12.49□□□□□ -0.41
RPL28-201ENST00000344063 CUL4AQ13619 759 aa12.49□□□□□ -0.41
RPL28-201ENST00000344063 CHST3Q7LGC8 479 aa12.49□□□□□ -0.41
RPL28-201ENST00000344063 BRAPQ7Z569 592 aa12.49□□□□□ -0.41
RPL28-201ENST00000344063 FAM227BQ96M60 508 aa12.49□□□□□ -0.41
RPL28-201ENST00000344063 CLSTN2Q9H4D0 955 aa12.49□□□□□ -0.41
RPL28-201ENST00000344063 HELLSQ9NRZ9 838 aa12.49□□□□□ -0.41
RPL28-201ENST00000344063 RHOXF2BP0C7M4 288 aa12.49□□□□□ -0.41
RPL28-201ENST00000344063 CTR9Q6PD62 1173 aa12.49□□□□□ -0.41
RPL28-201ENST00000344063 MICALL1Q8N3F8 863 aa12.49□□□□□ -0.41
RPL28-201ENST00000344063 RHOXF2Q9BQY4 288 aa12.49□□□□□ -0.41
RPL28-201ENST00000344063 LGR6Q9HBX8 967 aa12.49□□□□□ -0.41
RPL28-201ENST00000344063 ABCC3O15438 1527 aa12.49□□□□□ -0.41
RPL28-201ENST00000344063 CPSF1Q10570 1443 aaKnown RBP12.49□□□□□ -0.41
RPL28-201ENST00000344063 CDC37L1Q7L3B6 337 aa12.49□□□□□ -0.41
RPL28-201ENST00000344063 CCDC148Q8NFR7 591 aa12.49□□□□□ -0.41
RPL28-201ENST00000344063 SLC26A6Q9BXS9 759 aa12.49□□□□□ -0.41
RPL28-201ENST00000344063 LZTFL1Q9NQ48 299 aa12.49□□□□□ -0.41
RPL28-201ENST00000344063 A0A1B0GVL5 298 aa12.49□□□□□ -0.41
RPL28-201ENST00000344063 IL17REQ8NFR9 667 aa12.49□□□□□ -0.41
RPL28-201ENST00000344063 HECW2Q9P2P5 1572 aa12.49□□□□□ -0.41
RPL28-201ENST00000344063 GPTP24298 496 aa12.48□□□□□ -0.41
RPL28-201ENST00000344063 FAM160A1Q05DH4 1040 aa12.48□□□□□ -0.41
RPL28-201ENST00000344063 NAA30Q147X3 362 aaPredicted RBP12.48□□□□□ -0.41
RPL28-201ENST00000344063 MFSD6Q6ZSS7 791 aa12.48□□□□□ -0.41
RPL28-201ENST00000344063 DCAF5Q96JK2 942 aa12.48□□□□□ -0.41
RPL28-201ENST00000344063 METTL22Q9BUU2 404 aaPredicted RBP12.48□□□□□ -0.41
RPL28-201ENST00000344063 MATR3P43243 847 aaKnown RBP eCLIP12.48□□□□□ -0.41
RPL28-201ENST00000344063 CAVIN4Q5BKX8 364 aa12.48□□□□□ -0.41
RPL28-201ENST00000344063 LEO1Q8WVC0 666 aaPredicted RBP12.48□□□□□ -0.41
RPL28-201ENST00000344063 GOLGA6L10A6NI86 522 aa12.48□□□□□ -0.41
RPL28-201ENST00000344063 TNNI3KQ59H18 835 aa12.48□□□□□ -0.41
RPL28-201ENST00000344063 FPGT-TNNI3KV9GXZ4 949 aa12.48□□□□□ -0.41
RPL28-201ENST00000344063 E9PCH4 1651 aa12.48□□□□□ -0.41
RPL28-201ENST00000344063 SETBP1Q9Y6X0 1596 aa12.48□□□□□ -0.41
RPL28-201ENST00000344063 ARHGAP31Q2M1Z3 1444 aa12.48□□□□□ -0.41
RPL28-201ENST00000344063 CHRNA2Q15822 529 aa12.48□□□□□ -0.41
RPL28-201ENST00000344063 ZNF790Q6PG37 636 aa12.48□□□□□ -0.41
RPL28-201ENST00000344063 CATIPQ7Z7H3 387 aa12.48□□□□□ -0.41
RPL28-201ENST00000344063 NUP88Q99567 741 aaPredicted RBP12.48□□□□□ -0.41
RPL28-201ENST00000344063 PYM1Q9BRP8 204 aaKnown RBP12.48□□□□□ -0.41
RPL28-201ENST00000344063 RABEP2Q9H5N1 569 aa12.48□□□□□ -0.41
RPL28-201ENST00000344063 ZNF652Q9Y2D9 606 aa12.48□□□□□ -0.41
RPL28-201ENST00000344063 CADPS2Q86UW7 1296 aa12.47□□□□□ -0.41
RPL28-201ENST00000344063 SUCLG2Q96I99 432 aa12.47□□□□□ -0.41
RPL28-201ENST00000344063 ABCA6Q8N139 1617 aa12.47□□□□□ -0.41
RPL28-201ENST00000344063 TMTC2Q8N394 836 aa12.47□□□□□ -0.41
RPL28-201ENST00000344063 CNNM2Q9H8M5 875 aa12.47□□□□□ -0.41
RPL28-201ENST00000344063 POTEB2H3BUK9 544 aa12.47□□□□□ -0.41
RPL28-201ENST00000344063 ZBTB22O15209 634 aa12.47□□□□□ -0.41
RPL28-201ENST00000344063 RANBP6O60518 1105 aaKnown RBP12.47□□□□□ -0.41
RPL28-201ENST00000344063 KIAA1524Q8TCG1 905 aa12.47□□□□□ -0.41
RPL28-201ENST00000344063 KRT23Q9C075 422 aa12.47□□□□□ -0.41
RPL28-201ENST00000344063 TTC31Q49AM3 519 aaPredicted RBP12.46□□□□□ -0.41
RPL28-201ENST00000344063 ZCRB1Q8TBF4 217 aaKnown RBP12.46□□□□□ -0.41
RPL28-201ENST00000344063 BMP15O95972 392 aa12.46□□□□□ -0.41
RPL28-201ENST00000344063 METP08581 1390 aa12.46□□□□□ -0.41
RPL28-201ENST00000344063 A0A087WWV3 80 aa12.46□□□□□ -0.41
RPL28-201ENST00000344063 NUTM2BA6NNL0 878 aaPredicted RBP12.46□□□□□ -0.41
RPL28-201ENST00000344063 NUTM2EB1AL46 878 aaPredicted RBP12.46□□□□□ -0.41
RPL28-201ENST00000344063 KRT18P05783 430 aaKnown RBP12.46□□□□□ -0.41
RPL28-201ENST00000344063 DNAJC21Q5F1R6 531 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms