RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 H3BQF6 201 aa17.24■□□□□ 0.35
CLCN1-201ENST00000343257 UBASH3AP57075 661 aa17.24■□□□□ 0.35
CLCN1-201ENST00000343257 STOX1Q6ZVD7 989 aa17.24■□□□□ 0.35
CLCN1-201ENST00000343257 DDX46Q7L014 1031 aaKnown RBP17.24■□□□□ 0.35
CLCN1-201ENST00000343257 ILDR1Q86SU0 546 aaPredicted RBP17.24■□□□□ 0.35
CLCN1-201ENST00000343257 TOMM22Q9NS69 142 aa17.24■□□□□ 0.35
CLCN1-201ENST00000343257 CEP170BQ9Y4F5 1589 aaPredicted RBP17.23■□□□□ 0.35
CLCN1-201ENST00000343257 MARCKSP29966 332 aaPredicted RBP17.23■□□□□ 0.35
CLCN1-201ENST00000343257 CREBRFQ8IUR6 639 aa17.23■□□□□ 0.35
CLCN1-201ENST00000343257 ARFGAP3Q9NP61 516 aa17.23■□□□□ 0.35
CLCN1-201ENST00000343257 ADAM21Q9UKJ8 722 aa17.23■□□□□ 0.35
CLCN1-201ENST00000343257 FOXR1Q6PIV2 292 aa17.23■□□□□ 0.35
CLCN1-201ENST00000343257 REXO1L1PQ8IX06 675 aa17.23■□□□□ 0.35
CLCN1-201ENST00000343257 NGDNQ8NEJ9 315 aaKnown RBP17.23■□□□□ 0.35
CLCN1-201ENST00000343257 PLEKHA4Q9H4M7 779 aa17.23■□□□□ 0.35
CLCN1-201ENST00000343257 GPHNQ9NQX3 736 aaPredicted RBP17.23■□□□□ 0.35
CLCN1-201ENST00000343257 VPS18Q9P253 973 aa17.23■□□□□ 0.35
CLCN1-201ENST00000343257 COL15A1P39059 1388 aa17.23■□□□□ 0.35
CLCN1-201ENST00000343257 XRN1Q8IZH2 1706 aaKnown RBP17.22■□□□□ 0.35
CLCN1-201ENST00000343257 CASQ1P31415 396 aa17.22■□□□□ 0.35
CLCN1-201ENST00000343257 LRRFIP1Q32MZ4 808 aaKnown RBP17.22■□□□□ 0.35
CLCN1-201ENST00000343257 WWC2Q6AWC2 1192 aa17.22■□□□□ 0.35
CLCN1-201ENST00000343257 DESI2Q9BSY9 194 aa17.22■□□□□ 0.35
CLCN1-201ENST00000343257 PHACTR2O75167 634 aa17.22■□□□□ 0.35
CLCN1-201ENST00000343257 NLRP6P59044 892 aa17.22■□□□□ 0.35
CLCN1-201ENST00000343257 PPP2R3AQ06190 1150 aa17.22■□□□□ 0.35
CLCN1-201ENST00000343257 ERC1Q8IUD2 1116 aa17.22■□□□□ 0.35
CLCN1-201ENST00000343257 EFCAB8A8MWE9 144 aa17.22■□□□□ 0.35
CLCN1-201ENST00000343257 STK11IPQ8N1F8 1099 aa17.22■□□□□ 0.35
CLCN1-201ENST00000343257 IRX2Q9BZI1 471 aaPredicted RBP17.22■□□□□ 0.35
CLCN1-201ENST00000343257 PUF60Q9UHX1 559 aaKnown RBP17.22■□□□□ 0.35
CLCN1-201ENST00000343257 FAM193AP78312 1265 aa17.21■□□□□ 0.35
CLCN1-201ENST00000343257 HMG20BQ9P0W2 317 aa17.21■□□□□ 0.35
CLCN1-201ENST00000343257 RRP15Q9Y3B9 282 aaKnown RBP17.21■□□□□ 0.35
CLCN1-201ENST00000343257 EIF4A1P60842 406 aaKnown RBP17.21■□□□□ 0.35
CLCN1-201ENST00000343257 CCDC158Q5M9N0 1113 aa17.21■□□□□ 0.35
CLCN1-201ENST00000343257 AK7Q96M32 723 aa17.21■□□□□ 0.35
CLCN1-201ENST00000343257 NCAPHQ15003 741 aa17.2■□□□□ 0.34
CLCN1-201ENST00000343257 SUGCTQ9HAC7 445 aa17.2■□□□□ 0.34
CLCN1-201ENST00000343257 DLC1Q96QB1 1528 aa17.2■□□□□ 0.34
CLCN1-201ENST00000343257 PHLPP2Q6ZVD8 1323 aa17.2■□□□□ 0.34
CLCN1-201ENST00000343257 ZNF202O95125 648 aa17.2■□□□□ 0.34
CLCN1-201ENST00000343257 TOP1P11387 765 aaKnown RBP17.2■□□□□ 0.34
CLCN1-201ENST00000343257 ADKP55263 362 aaKnown RBP17.2■□□□□ 0.34
CLCN1-201ENST00000343257 KCND1Q9NSA2 647 aa17.2■□□□□ 0.34
CLCN1-201ENST00000343257 IGSF1Q8N6C5 1336 aa17.2■□□□□ 0.34
CLCN1-201ENST00000343257 VWA3AA6NCI4 1184 aa17.2■□□□□ 0.34
CLCN1-201ENST00000343257 N4BP1O75113 896 aaKnown RBP17.2■□□□□ 0.34
CLCN1-201ENST00000343257 KRT32Q14532 448 aa17.2■□□□□ 0.34
CLCN1-201ENST00000343257 MPRIPQ6WCQ1 1025 aa17.2■□□□□ 0.34
CLCN1-201ENST00000343257 PDE11AQ9HCR9 933 aa17.2■□□□□ 0.34
CLCN1-201ENST00000343257 PPP2R2CQ9Y2T4 447 aa17.2■□□□□ 0.34
CLCN1-201ENST00000343257 PEAK1Q9H792 1746 aa17.19■□□□□ 0.34
CLCN1-201ENST00000343257 ADGRL3Q9HAR2 1447 aa17.19■□□□□ 0.34
CLCN1-201ENST00000343257 DHX16O60231 1041 aaKnown RBP17.19■□□□□ 0.34
CLCN1-201ENST00000343257 DHX58Q96C10 678 aa17.19■□□□□ 0.34
CLCN1-201ENST00000343257 TFRCP02786 760 aaKnown RBP17.19■□□□□ 0.34
CLCN1-201ENST00000343257 MTX1Q13505 466 aa17.19■□□□□ 0.34
CLCN1-201ENST00000343257 SMARCC2Q8TAQ2 1214 aa17.19■□□□□ 0.34
CLCN1-201ENST00000343257 CWC15Q9P013 229 aaKnown RBP17.19■□□□□ 0.34
CLCN1-201ENST00000343257 MED23Q9ULK4 1368 aa17.18■□□□□ 0.34
CLCN1-201ENST00000343257 PFKFB2O60825 505 aa17.18■□□□□ 0.34
CLCN1-201ENST00000343257 LONRF2Q1L5Z9 754 aa17.18■□□□□ 0.34
CLCN1-201ENST00000343257 NAA16Q6N069 864 aaPredicted RBP17.18■□□□□ 0.34
CLCN1-201ENST00000343257 TOGARAM2Q6ZUX3 1019 aa17.18■□□□□ 0.34
CLCN1-201ENST00000343257 FUT8Q9BYC5 575 aa17.18■□□□□ 0.34
CLCN1-201ENST00000343257 FLT4P35916 1363 aa17.18■□□□□ 0.34
CLCN1-201ENST00000343257 NLRP12P59046 1061 aa17.18■□□□□ 0.34
CLCN1-201ENST00000343257 MUM1L1Q5H9M0 696 aa17.18■□□□□ 0.34
CLCN1-201ENST00000343257 TTLL5Q6EMB2 1281 aa17.18■□□□□ 0.34
CLCN1-201ENST00000343257 KAZALD1Q96I82 304 aa17.18■□□□□ 0.34
CLCN1-201ENST00000343257 ADALQ6DHV7 355 aa17.18■□□□□ 0.34
CLCN1-201ENST00000343257 SRLQ86TD4 932 aa17.18■□□□□ 0.34
CLCN1-201ENST00000343257 CCDC12Q8WUD4 166 aaPredicted RBP17.18■□□□□ 0.34
CLCN1-201ENST00000343257 BTBD11A6QL63 1104 aa17.17■□□□□ 0.34
CLCN1-201ENST00000343257 GTF2A1P52655 376 aaPredicted RBP17.17■□□□□ 0.34
CLCN1-201ENST00000343257 FBXO18Q8NFZ0 1043 aa17.17■□□□□ 0.34
CLCN1-201ENST00000343257 PNOCQ13519 176 aa17.17■□□□□ 0.34
CLCN1-201ENST00000343257 LZTFL1Q9NQ48 299 aa17.17■□□□□ 0.34
CLCN1-201ENST00000343257 FANCLQ9NW38 375 aa17.17■□□□□ 0.34
CLCN1-201ENST00000343257 OVOS2A0A0J9YW53 1432 aa17.16■□□□□ 0.34
CLCN1-201ENST00000343257 OVOS2Q6IE36 1432 aa17.16■□□□□ 0.34
CLCN1-201ENST00000343257 SPTLC2O15270 562 aa17.16■□□□□ 0.34
CLCN1-201ENST00000343257 ALDH1L1O75891 902 aa17.16■□□□□ 0.34
CLCN1-201ENST00000343257 LEKR1Q6ZMV7 388 aa17.16■□□□□ 0.34
CLCN1-201ENST00000343257 LINC00301Q8NCQ3 95 aa17.16■□□□□ 0.34
CLCN1-201ENST00000343257 ALDH8A1Q9H2A2 487 aaPredicted RBP17.16■□□□□ 0.34
CLCN1-201ENST00000343257 GPR161Q8N6U8 529 aaKnown RBP17.16■□□□□ 0.34
CLCN1-201ENST00000343257 SRRTQ9BXP5 876 aaKnown RBP17.16■□□□□ 0.34
CLCN1-201ENST00000343257 A0A0U1RQJ8 604 aa17.16■□□□□ 0.34
CLCN1-201ENST00000343257 PFKFB1P16118 471 aa17.16■□□□□ 0.34
CLCN1-201ENST00000343257 MTF1Q14872 753 aa17.16■□□□□ 0.34
CLCN1-201ENST00000343257 DHX32Q7L7V1 743 aaKnown RBP17.16■□□□□ 0.34
CLCN1-201ENST00000343257 GOLGA5Q8TBA6 731 aa17.16■□□□□ 0.34
CLCN1-201ENST00000343257 ATRIPQ8WXE1 791 aa17.16■□□□□ 0.34
CLCN1-201ENST00000343257 UBXN6Q9BZV1 441 aa17.16■□□□□ 0.34
CLCN1-201ENST00000343257 CCP110O43303 1012 aa17.15■□□□□ 0.34
CLCN1-201ENST00000343257 ZSCAN12O43309 604 aa17.15■□□□□ 0.34
CLCN1-201ENST00000343257 HAND2P61296 217 aa17.15■□□□□ 0.34
CLCN1-201ENST00000343257 DBNLQ9UJU6 430 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms