RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 ZNF771Q7L3S4 317 aaPredicted RBP17.51■□□□□ 0.39
PBX3-201ENST00000342287 XAGE2Q96GT9 111 aa17.51■□□□□ 0.39
PBX3-201ENST00000342287 MROH5Q6ZUA9 1318 aa17.51■□□□□ 0.39
PBX3-201ENST00000342287 DNAJC2Q99543 621 aaKnown RBP17.51■□□□□ 0.39
PBX3-201ENST00000342287 MPHOSPH8Q99549 860 aa17.51■□□□□ 0.39
PBX3-201ENST00000342287 PDE8BO95263 885 aa17.5■□□□□ 0.39
PBX3-201ENST00000342287 KCNJ4P48050 445 aa17.5■□□□□ 0.39
PBX3-201ENST00000342287 CSPP1Q1MSJ5 1256 aa17.5■□□□□ 0.39
PBX3-201ENST00000342287 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.5■□□□□ 0.39
PBX3-201ENST00000342287 SEC31BQ9NQW1 1179 aa17.5■□□□□ 0.39
PBX3-201ENST00000342287 NOL7Q9UMY1 257 aaKnown RBP17.5■□□□□ 0.39
PBX3-201ENST00000342287 RIC1Q4ADV7 1423 aa17.5■□□□□ 0.39
PBX3-201ENST00000342287 TPTE2Q6XPS3 522 aa17.5■□□□□ 0.39
PBX3-201ENST00000342287 NBPF5PQ86XG9 351 aaPredicted RBP17.5■□□□□ 0.39
PBX3-201ENST00000342287 VGLL2Q8N8G2 317 aa17.5■□□□□ 0.39
PBX3-201ENST00000342287 IGHMBP2P38935 993 aaKnown RBP17.49■□□□□ 0.39
PBX3-201ENST00000342287 SF3B3Q15393 1217 aaKnown RBP17.49■□□□□ 0.39
PBX3-201ENST00000342287 EDC3Q96F86 508 aaKnown RBP17.49■□□□□ 0.39
PBX3-201ENST00000342287 DDX60Q8IY21 1712 aaKnown RBP17.49■□□□□ 0.39
PBX3-201ENST00000342287 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.49■□□□□ 0.39
PBX3-201ENST00000342287 IFIT1P09914 478 aaKnown RBP17.49■□□□□ 0.39
PBX3-201ENST00000342287 RNF216Q9NWF9 866 aaPredicted RBP17.49■□□□□ 0.39
PBX3-201ENST00000342287 ANAPC15P60006 121 aa17.48■□□□□ 0.39
PBX3-201ENST00000342287 TXNRD1Q16881 649 aa17.48■□□□□ 0.39
PBX3-201ENST00000342287 ADORA1P30542 326 aa17.48■□□□□ 0.39
PBX3-201ENST00000342287 NMIQ13287 307 aaPredicted RBP17.48■□□□□ 0.39
PBX3-201ENST00000342287 TTC39AQ5SRH9 613 aa17.48■□□□□ 0.39
PBX3-201ENST00000342287 TICAM2Q86XR7 235 aa17.48■□□□□ 0.39
PBX3-201ENST00000342287 CDC5LQ99459 802 aaKnown RBP17.48■□□□□ 0.39
PBX3-201ENST00000342287 LSG1Q9H089 658 aaKnown RBP17.48■□□□□ 0.39
PBX3-201ENST00000342287 NDUFB9Q9Y6M9 179 aa17.48■□□□□ 0.39
PBX3-201ENST00000342287 PLSCR1O15162 318 aa17.47■□□□□ 0.39
PBX3-201ENST00000342287 SSFA2P28290 1259 aa17.47■□□□□ 0.39
PBX3-201ENST00000342287 PROM2Q8N271 834 aa17.47■□□□□ 0.39
PBX3-201ENST00000342287 PAG1Q9NWQ8 432 aa17.47■□□□□ 0.39
PBX3-201ENST00000342287 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.47■□□□□ 0.39
PBX3-201ENST00000342287 RAD50Q92878 1312 aa17.47■□□□□ 0.39
PBX3-201ENST00000342287 RFX7Q2KHR2 1363 aa17.47■□□□□ 0.39
PBX3-201ENST00000342287 LAMB2P55268 1798 aa17.47■□□□□ 0.39
PBX3-201ENST00000342287 KBTBD3Q8NAB2 608 aa17.47■□□□□ 0.39
PBX3-201ENST00000342287 FAM227BQ96M60 508 aa17.47■□□□□ 0.39
PBX3-201ENST00000342287 LRP5O75197 1615 aa17.46■□□□□ 0.39
PBX3-201ENST00000342287 GOLIM4O00461 696 aa17.46■□□□□ 0.39
PBX3-201ENST00000342287 HSPA4P34932 840 aa17.46■□□□□ 0.39
PBX3-201ENST00000342287 PUM3Q15397 648 aaKnown RBP17.46■□□□□ 0.39
PBX3-201ENST00000342287 DDX46Q7L014 1031 aaKnown RBP17.46■□□□□ 0.39
PBX3-201ENST00000342287 NLRP3Q96P20 1036 aa17.46■□□□□ 0.39
PBX3-201ENST00000342287 SNRKQ9NRH2 765 aa17.46■□□□□ 0.39
PBX3-201ENST00000342287 ABCC12Q96J65 1359 aa17.46■□□□□ 0.38
PBX3-201ENST00000342287 APBA3O96018 575 aa17.45■□□□□ 0.38
PBX3-201ENST00000342287 LPIN2Q92539 896 aa17.45■□□□□ 0.38
PBX3-201ENST00000342287 C3orf67Q6ZVT6 689 aa17.45■□□□□ 0.38
PBX3-201ENST00000342287 ZNF710Q8N1W2 664 aa17.45■□□□□ 0.38
PBX3-201ENST00000342287 HELBQ8NG08 1087 aaPredicted RBP17.45■□□□□ 0.38
PBX3-201ENST00000342287 IL17RAQ96F46 866 aa17.45■□□□□ 0.38
PBX3-201ENST00000342287 ZNF512BQ96KM6 892 aaPredicted RBP17.45■□□□□ 0.38
PBX3-201ENST00000342287 CARMIL3Q8ND23 1372 aa17.44■□□□□ 0.38
PBX3-201ENST00000342287 A0A0D9SFI3 127 aa17.44■□□□□ 0.38
PBX3-201ENST00000342287 FGFR2P21802 821 aa17.44■□□□□ 0.38
PBX3-201ENST00000342287 NFIXQ14938 502 aa17.44■□□□□ 0.38
PBX3-201ENST00000342287 ANKRD18AQ8IVF6 992 aa17.44■□□□□ 0.38
PBX3-201ENST00000342287 RGS17Q9UGC6 210 aaPredicted RBP17.44■□□□□ 0.38
PBX3-201ENST00000342287 NPHP1O15259 732 aa17.44■□□□□ 0.38
PBX3-201ENST00000342287 ST18O60284 1047 aa17.44■□□□□ 0.38
PBX3-201ENST00000342287 FBXO41Q8TF61 875 aa17.44■□□□□ 0.38
PBX3-201ENST00000342287 C4AP0C0L4 1744 aa17.44■□□□□ 0.38
PBX3-201ENST00000342287 EP400Q96L91 3159 aa17.43■□□□□ 0.38
PBX3-201ENST00000342287 CD2BP2O95400 341 aaKnown RBP17.43■□□□□ 0.38
PBX3-201ENST00000342287 FKBP4Q02790 459 aaKnown RBP eCLIP17.43■□□□□ 0.38
PBX3-201ENST00000342287 PALD1Q9ULE6 856 aa17.43■□□□□ 0.38
PBX3-201ENST00000342287 COL24A1Q17RW2 1714 aa17.43■□□□□ 0.38
PBX3-201ENST00000342287 K7ELQ4 463 aaPredicted RBP17.43■□□□□ 0.38
PBX3-201ENST00000342287 SLC5A1P13866 664 aa17.43■□□□□ 0.38
PBX3-201ENST00000342287 ZBTB9Q96C00 473 aa17.43■□□□□ 0.38
PBX3-201ENST00000342287 CCDC171Q6TFL3 1326 aa17.42■□□□□ 0.38
PBX3-201ENST00000342287 GYS1P13807 737 aa17.42■□□□□ 0.38
PBX3-201ENST00000342287 PTH1RQ03431 593 aa17.42■□□□□ 0.38
PBX3-201ENST00000342287 HS1BP3Q53T59 392 aa17.42■□□□□ 0.38
PBX3-201ENST00000342287 BSDC1Q9NW68 430 aaPredicted RBP17.42■□□□□ 0.38
PBX3-201ENST00000342287 ZKSCAN5Q9Y2L8 839 aa17.42■□□□□ 0.38
PBX3-201ENST00000342287 TAF5LO75529 589 aa17.42■□□□□ 0.38
PBX3-201ENST00000342287 CHRNDQ07001 517 aa17.42■□□□□ 0.38
PBX3-201ENST00000342287 KCNG1Q9UIX4 513 aa17.42■□□□□ 0.38
PBX3-201ENST00000342287 UBR3Q6ZT12 1888 aa17.42■□□□□ 0.38
PBX3-201ENST00000342287 SKOR2Q2VWA4 1001 aaPredicted RBP17.41■□□□□ 0.38
PBX3-201ENST00000342287 LRRFIP1Q32MZ4 808 aaKnown RBP17.41■□□□□ 0.38
PBX3-201ENST00000342287 CCDC102BQ68D86 513 aa17.41■□□□□ 0.38
PBX3-201ENST00000342287 POTEAQ6S8J7 498 aa17.41■□□□□ 0.38
PBX3-201ENST00000342287 MAP4K1Q92918 833 aa17.41■□□□□ 0.38
PBX3-201ENST00000342287 TNPO1Q92973 898 aaKnown RBP17.41■□□□□ 0.38
PBX3-201ENST00000342287 MED23Q9ULK4 1368 aa17.41■□□□□ 0.38
PBX3-201ENST00000342287 UQCRFS1P1P0C7P4 283 aa17.4■□□□□ 0.38
PBX3-201ENST00000342287 SCARF1Q14162 830 aa17.4■□□□□ 0.38
PBX3-201ENST00000342287 MCMDC2Q4G0Z9 681 aa17.4■□□□□ 0.38
PBX3-201ENST00000342287 MYRIPQ8NFW9 859 aa17.4■□□□□ 0.38
PBX3-201ENST00000342287 CHMP4CQ96CF2 233 aa17.4■□□□□ 0.38
PBX3-201ENST00000342287 NEK4P51957 841 aa17.4■□□□□ 0.38
PBX3-201ENST00000342287 CCDC24Q8N4L8 307 aa17.4■□□□□ 0.38
PBX3-201ENST00000342287 CNBD1Q8NA66 436 aa17.4■□□□□ 0.38
PBX3-201ENST00000342287 HELLSQ9NRZ9 838 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms