RNA–Protein interactions for RNA: ENST00000341062.6

TRIM60-201, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM60, Length 1,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-201ENST00000341062 RPAP1Q9BWH6 1393 aaPredicted RBP16.06■□□□□ 0.16
TRIM60-201ENST00000341062 COL11A2P13942 1736 aaPredicted RBP16.06■□□□□ 0.16
TRIM60-201ENST00000341062 CDHR2Q9BYE9 1310 aa16.06■□□□□ 0.16
TRIM60-201ENST00000341062 ZKSCAN1P17029 563 aaPredicted RBP16.05■□□□□ 0.16
TRIM60-201ENST00000341062 PRPF40BQ6NWY9 871 aaKnown RBP16.05■□□□□ 0.16
TRIM60-201ENST00000341062 ZNF594Q96JF6 807 aaPredicted RBP16.05■□□□□ 0.16
TRIM60-201ENST00000341062 ZSCAN31Q96LW9 406 aaPredicted RBP16.05■□□□□ 0.16
TRIM60-201ENST00000341062 FAM227BQ96M60 508 aa16.05■□□□□ 0.16
TRIM60-201ENST00000341062 BOLA2Q9H3K6 86 aa16.05■□□□□ 0.16
TRIM60-201ENST00000341062 DBNLQ9UJU6 430 aaKnown RBP16.05■□□□□ 0.16
TRIM60-201ENST00000341062 SOCS7O14512 581 aa16.05■□□□□ 0.16
TRIM60-201ENST00000341062 ZSCAN23Q3MJ62 389 aa16.05■□□□□ 0.16
TRIM60-201ENST00000341062 CAVIN1Q6NZI2 390 aaKnown RBP16.05■□□□□ 0.16
TRIM60-201ENST00000341062 CNBD1Q8NA66 436 aa16.05■□□□□ 0.16
TRIM60-201ENST00000341062 FSD1Q9BTV5 496 aa16.05■□□□□ 0.16
TRIM60-201ENST00000341062 GREM2Q9H772 168 aa16.05■□□□□ 0.16
TRIM60-201ENST00000341062 SEC31BQ9NQW1 1179 aa16.05■□□□□ 0.16
TRIM60-201ENST00000341062 SH2B1Q9NRF2 756 aaPredicted RBP16.05■□□□□ 0.16
TRIM60-201ENST00000341062 RBM8AQ9Y5S9 174 aaKnown RBP16.05■□□□□ 0.16
TRIM60-201ENST00000341062 CYP46A1Q9Y6A2 500 aa16.05■□□□□ 0.16
TRIM60-201ENST00000341062 TFCP2Q12800 502 aa16.04■□□□□ 0.16
TRIM60-201ENST00000341062 CREB3L3Q68CJ9 461 aa16.04■□□□□ 0.16
TRIM60-201ENST00000341062 TICAM2Q86XR7 235 aa16.04■□□□□ 0.16
TRIM60-201ENST00000341062 TTLL11Q8NHH1 800 aa16.04■□□□□ 0.16
TRIM60-201ENST00000341062 JAKMIP1Q96N16 626 aaKnown RBP16.04■□□□□ 0.16
TRIM60-201ENST00000341062 SGIP1Q9BQI5 828 aa16.04■□□□□ 0.16
TRIM60-201ENST00000341062 A0A0D9SFI3 127 aa16.03■□□□□ 0.16
TRIM60-201ENST00000341062 HMGB2P26583 209 aaKnown RBP16.03■□□□□ 0.16
TRIM60-201ENST00000341062 PTGER2P43116 358 aa16.03■□□□□ 0.16
TRIM60-201ENST00000341062 CTSWP56202 376 aa16.03■□□□□ 0.16
TRIM60-201ENST00000341062 ADCK5Q3MIX3 580 aa16.03■□□□□ 0.16
TRIM60-201ENST00000341062 TSGA10IPQ3SY00 556 aa16.03■□□□□ 0.16
TRIM60-201ENST00000341062 TPTE2Q6XPS3 522 aa16.03■□□□□ 0.16
TRIM60-201ENST00000341062 GPR108Q9NPR9 543 aa16.03■□□□□ 0.16
TRIM60-201ENST00000341062 PDRG1Q9NUG6 133 aa16.03■□□□□ 0.16
TRIM60-201ENST00000341062 PSMA5P28066 241 aa16.03■□□□□ 0.16
TRIM60-201ENST00000341062 GTF2E1P29083 439 aaPredicted RBP16.03■□□□□ 0.16
TRIM60-201ENST00000341062 RNF20Q5VTR2 975 aa16.03■□□□□ 0.16
TRIM60-201ENST00000341062 PLA2G12BQ9BX93 195 aa16.03■□□□□ 0.16
TRIM60-201ENST00000341062 ALDH8A1Q9H2A2 487 aaPredicted RBP16.03■□□□□ 0.16
TRIM60-201ENST00000341062 HMG20BQ9P0W2 317 aa16.03■□□□□ 0.16
TRIM60-201ENST00000341062 CHMP3Q9Y3E7 222 aa16.03■□□□□ 0.16
TRIM60-201ENST00000341062 PARP3Q9Y6F1 533 aa16.03■□□□□ 0.16
TRIM60-201ENST00000341062 PDE8AO60658 829 aa16.02■□□□□ 0.16
TRIM60-201ENST00000341062 CSF1RP07333 972 aa16.02■□□□□ 0.16
TRIM60-201ENST00000341062 SLC10A5Q5PT55 438 aa16.02■□□□□ 0.16
TRIM60-201ENST00000341062 TMEM87AQ8NBN3 555 aa16.02■□□□□ 0.16
TRIM60-201ENST00000341062 CACNA1SQ13698 1873 aa16.02■□□□□ 0.15
TRIM60-201ENST00000341062 SLC27A2O14975 620 aa16.01■□□□□ 0.15
TRIM60-201ENST00000341062 HAUS7Q99871 368 aa16.01■□□□□ 0.15
TRIM60-201ENST00000341062 NYXQ9GZU5 481 aa16.01■□□□□ 0.15
TRIM60-201ENST00000341062 MTFR1LQ9H019 292 aa16.01■□□□□ 0.15
TRIM60-201ENST00000341062 NPHP1O15259 732 aa16.01■□□□□ 0.15
TRIM60-201ENST00000341062 NCLP19338 710 aaKnown RBP16.01■□□□□ 0.15
TRIM60-201ENST00000341062 FOXD4L5Q5VV16 416 aaPredicted RBP16.01■□□□□ 0.15
TRIM60-201ENST00000341062 SLC16A10Q8TF71 515 aa16.01■□□□□ 0.15
TRIM60-201ENST00000341062 FOXD4L4Q8WXT5 416 aaPredicted RBP16.01■□□□□ 0.15
TRIM60-201ENST00000341062 PUS3Q9BZE2 481 aaKnown RBP16.01■□□□□ 0.15
TRIM60-201ENST00000341062 ZSCAN22P10073 491 aaPredicted RBP16■□□□□ 0.15
TRIM60-201ENST00000341062 PDIA4P13667 645 aaKnown RBP16■□□□□ 0.15
TRIM60-201ENST00000341062 CPA1P15085 419 aa16■□□□□ 0.15
TRIM60-201ENST00000341062 KCNJ4P48050 445 aa16■□□□□ 0.15
TRIM60-201ENST00000341062 NASPP49321 788 aaPredicted RBP16■□□□□ 0.15
TRIM60-201ENST00000341062 ATG9AQ7Z3C6 839 aa16■□□□□ 0.15
TRIM60-201ENST00000341062 CHAMP1Q96JM3 812 aa16■□□□□ 0.15
TRIM60-201ENST00000341062 SMC3Q9UQE7 1217 aa16■□□□□ 0.15
TRIM60-201ENST00000341062 STX6O43752 255 aa15.99■□□□□ 0.15
TRIM60-201ENST00000341062 TAF5LO75529 589 aa15.99■□□□□ 0.15
TRIM60-201ENST00000341062 CHRNA5P30532 468 aa15.99■□□□□ 0.15
TRIM60-201ENST00000341062 IL15P40933 162 aaPredicted RBP15.99■□□□□ 0.15
TRIM60-201ENST00000341062 DBNDD2Q9BQY9 259 aa15.99■□□□□ 0.15
TRIM60-201ENST00000341062 TMEM63CQ9P1W3 806 aa15.99■□□□□ 0.15
TRIM60-201ENST00000341062 KIAA1551Q9HCM1 1747 aa15.99■□□□□ 0.15
TRIM60-201ENST00000341062 CIAO1O76071 339 aa15.99■□□□□ 0.15
TRIM60-201ENST00000341062 LARGE1O95461 756 aa15.99■□□□□ 0.15
TRIM60-201ENST00000341062 SYT1P21579 422 aa15.99■□□□□ 0.15
TRIM60-201ENST00000341062 ITGA6P23229 1130 aa15.99■□□□□ 0.15
TRIM60-201ENST00000341062 CCDC173Q0VFZ6 552 aa15.99■□□□□ 0.15
TRIM60-201ENST00000341062 ANKRD1Q15327 319 aa15.99■□□□□ 0.15
TRIM60-201ENST00000341062 LRRC24Q50LG9 513 aa15.99■□□□□ 0.15
TRIM60-201ENST00000341062 PPP1R9BQ96SB3 815 aa15.99■□□□□ 0.15
TRIM60-201ENST00000341062 WWC3Q9ULE0 1092 aa15.99■□□□□ 0.15
TRIM60-201ENST00000341062 WTIPA6NIX2 430 aaPredicted RBP15.98■□□□□ 0.15
TRIM60-201ENST00000341062 ZNF589Q86UQ0 364 aaPredicted RBP15.98■□□□□ 0.15
TRIM60-201ENST00000341062 CELF1Q92879 486 aaKnown RBP15.98■□□□□ 0.15
TRIM60-201ENST00000341062 ATP6V1DQ9Y5K8 247 aa15.98■□□□□ 0.15
TRIM60-201ENST00000341062 ZNF609O15014 1411 aa15.98■□□□□ 0.15
TRIM60-201ENST00000341062 KIF13BQ9NQT8 1826 aa15.98■□□□□ 0.15
TRIM60-201ENST00000341062 ST5P78524 1137 aa15.97■□□□□ 0.15
TRIM60-201ENST00000341062 KRT32Q14532 448 aa15.97■□□□□ 0.15
TRIM60-201ENST00000341062 LRSAM1Q6UWE0 723 aa15.97■□□□□ 0.15
TRIM60-201ENST00000341062 RRAGDQ9NQL2 400 aaPredicted RBP15.97■□□□□ 0.15
TRIM60-201ENST00000341062 NSFL1CQ9UNZ2 370 aaKnown RBP15.97■□□□□ 0.15
TRIM60-201ENST00000341062 C10orf71Q711Q0 1435 aa15.97■□□□□ 0.15
TRIM60-201ENST00000341062 LAMA4Q16363 1823 aa15.97■□□□□ 0.15
TRIM60-201ENST00000341062 EYA2O00167 538 aa15.97■□□□□ 0.15
TRIM60-201ENST00000341062 RPS6KB1P23443 525 aa15.97■□□□□ 0.15
TRIM60-201ENST00000341062 ST3GAL1Q11201 340 aa15.97■□□□□ 0.15
TRIM60-201ENST00000341062 SF3B3Q15393 1217 aaKnown RBP15.97■□□□□ 0.15
TRIM60-201ENST00000341062 ME3Q16798 604 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms