RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 SYCP1Q15431 976 aa14.94□□□□□ -0.02
LIN54-201ENST00000340417 CKAP2LQ8IYA6 745 aa14.94□□□□□ -0.02
LIN54-201ENST00000340417 PDCL3Q9H2J4 239 aa14.94□□□□□ -0.02
LIN54-201ENST00000340417 CA8P35219 290 aa14.94□□□□□ -0.02
LIN54-201ENST00000340417 OTUD7BQ6GQQ9 843 aa14.94□□□□□ -0.02
LIN54-201ENST00000340417 FER1L4A9Z1Z3 1794 aa14.93□□□□□ -0.02
LIN54-201ENST00000340417 TULP4Q9NRJ4 1543 aa14.93□□□□□ -0.02
LIN54-201ENST00000340417 NEURL1BA8MQ27 555 aa14.93□□□□□ -0.02
LIN54-201ENST00000340417 ZYXQ15942 572 aaKnown RBP14.93□□□□□ -0.02
LIN54-201ENST00000340417 SUCLG2Q96I99 432 aa14.93□□□□□ -0.02
LIN54-201ENST00000340417 KCNQ2O43526 872 aa14.93□□□□□ -0.02
LIN54-201ENST00000340417 IRX3P78415 501 aaPredicted RBP14.93□□□□□ -0.02
LIN54-201ENST00000340417 DCAF15Q66K64 600 aa14.93□□□□□ -0.02
LIN54-201ENST00000340417 SMARCC2Q8TAQ2 1214 aa14.93□□□□□ -0.02
LIN54-201ENST00000340417 BBOX1O75936 387 aa14.93□□□□□ -0.02
LIN54-201ENST00000340417 LIG1P18858 919 aa14.93□□□□□ -0.02
LIN54-201ENST00000340417 TAOK3Q9H2K8 898 aa14.93□□□□□ -0.02
LIN54-201ENST00000340417 TRIM35Q9UPQ4 493 aa14.93□□□□□ -0.02
LIN54-201ENST00000340417 PTCH1Q13635 1447 aa14.93□□□□□ -0.02
LIN54-201ENST00000340417 KLHDC4Q8TBB5 520 aa14.93□□□□□ -0.02
LIN54-201ENST00000340417 MASTLQ96GX5 879 aa14.93□□□□□ -0.02
LIN54-201ENST00000340417 PCCAP05165 728 aaPredicted RBP14.93□□□□□ -0.02
LIN54-201ENST00000340417 MCM5P33992 734 aa14.93□□□□□ -0.02
LIN54-201ENST00000340417 CC2D2BQ6DHV5 1058 aa14.93□□□□□ -0.02
LIN54-201ENST00000340417 SPATA31A1Q5TZJ5 1347 aa14.93□□□□□ -0.02
LIN54-201ENST00000340417 GNAQP50148 359 aa14.92□□□□□ -0.02
LIN54-201ENST00000340417 NAT10Q9H0A0 1025 aaKnown RBP14.92□□□□□ -0.02
LIN54-201ENST00000340417 USP40Q9NVE5 1235 aa14.92□□□□□ -0.02
LIN54-201ENST00000340417 MBD4O95243 580 aa14.92□□□□□ -0.02
LIN54-201ENST00000340417 FIBPO43427 364 aa14.92□□□□□ -0.02
LIN54-201ENST00000340417 C21orf2O43822 256 aa14.92□□□□□ -0.02
LIN54-201ENST00000340417 METAP2P50579 478 aaKnown RBP eCLIP14.92□□□□□ -0.02
LIN54-201ENST00000340417 CCT2P78371 535 aaKnown RBP14.92□□□□□ -0.02
LIN54-201ENST00000340417 ARHGEF6Q15052 776 aa14.92□□□□□ -0.02
LIN54-201ENST00000340417 GOLGA6L3A6NEY3 463 aa14.92□□□□□ -0.02
LIN54-201ENST00000340417 ADRA2BP18089 450 aa14.92□□□□□ -0.02
LIN54-201ENST00000340417 TMTC2Q8N394 836 aa14.92□□□□□ -0.02
LIN54-201ENST00000340417 AATFQ9NY61 560 aaKnown RBP eCLIP14.92□□□□□ -0.02
LIN54-201ENST00000340417 RNF181Q9P0P0 153 aa14.92□□□□□ -0.02
LIN54-201ENST00000340417 UNC13BO14795 1591 aa14.92□□□□□ -0.02
LIN54-201ENST00000340417 XDHP47989 1333 aa14.91□□□□□ -0.02
LIN54-201ENST00000340417 TCP10L2B9ZVM9 353 aa14.91□□□□□ -0.02
LIN54-201ENST00000340417 GIGYF2Q6Y7W6 1299 aaKnown RBP14.91□□□□□ -0.02
LIN54-201ENST00000340417 DNAI2Q9GZS0 605 aa14.91□□□□□ -0.02
LIN54-201ENST00000340417 C8orf76Q96K31 380 aa14.91□□□□□ -0.02
LIN54-201ENST00000340417 UPF3BQ9BZI7 483 aaKnown RBP14.91□□□□□ -0.02
LIN54-201ENST00000340417 INO80Q9ULG1 1556 aaPredicted RBP14.91□□□□□ -0.02
LIN54-201ENST00000340417 RAB11FIP4Q86YS3 637 aa14.91□□□□□ -0.02
LIN54-201ENST00000340417 IARSP41252 1262 aaKnown RBP14.91□□□□□ -0.02
LIN54-201ENST00000340417 NEK1Q96PY6 1258 aa14.91□□□□□ -0.02
LIN54-201ENST00000340417 LMTK2Q8IWU2 1503 aa14.9□□□□□ -0.02
LIN54-201ENST00000340417 SCNN1DP51172 638 aa14.9□□□□□ -0.02
LIN54-201ENST00000340417 CCDC83Q8IWF9 413 aa14.9□□□□□ -0.02
LIN54-201ENST00000340417 CEP57L1Q8IYX8 460 aa14.9□□□□□ -0.02
LIN54-201ENST00000340417 HMG20BQ9P0W2 317 aa14.9□□□□□ -0.02
LIN54-201ENST00000340417 NAP1L1P55209 391 aaKnown RBP14.9□□□□□ -0.02
LIN54-201ENST00000340417 AS3MTQ9HBK9 375 aa14.9□□□□□ -0.02
LIN54-201ENST00000340417 HEG1Q9ULI3 1381 aa14.9□□□□□ -0.02
LIN54-201ENST00000340417 DHX8Q14562 1220 aaKnown RBP14.9□□□□□ -0.02
LIN54-201ENST00000340417 TNNI3KQ59H18 835 aa14.9□□□□□ -0.02
LIN54-201ENST00000340417 CEP85Q6P2H3 762 aa14.9□□□□□ -0.02
LIN54-201ENST00000340417 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.9□□□□□ -0.021e-6■■■■■ 154
LIN54-201ENST00000340417 FPGT-TNNI3KV9GXZ4 949 aa14.9□□□□□ -0.02
LIN54-201ENST00000340417 CYP27B1O15528 508 aa14.9□□□□□ -0.02
LIN54-201ENST00000340417 GRIN3BO60391 1043 aa14.9□□□□□ -0.02
LIN54-201ENST00000340417 CPSF1Q10570 1443 aaKnown RBP14.9□□□□□ -0.02
LIN54-201ENST00000340417 HEATR3Q7Z4Q2 680 aa14.9□□□□□ -0.02
LIN54-201ENST00000340417 DBNDD1Q9H9R9 158 aa14.89□□□□□ -0.03
LIN54-201ENST00000340417 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.89□□□□□ -0.03
LIN54-201ENST00000340417 PIK3C2BO00750 1634 aa14.89□□□□□ -0.03
LIN54-201ENST00000340417 RAD17O75943 681 aa14.89□□□□□ -0.03
LIN54-201ENST00000340417 VSIG10Q8N0Z9 540 aa14.89□□□□□ -0.03
LIN54-201ENST00000340417 ATG3Q9NT62 314 aa14.89□□□□□ -0.03
LIN54-201ENST00000340417 SLC26A6Q9BXS9 759 aa14.89□□□□□ -0.03
LIN54-201ENST00000340417 CCDC39Q9UFE4 941 aa14.89□□□□□ -0.03
LIN54-201ENST00000340417 TTC41PQ6P2S7 1318 aa14.89□□□□□ -0.03
LIN54-201ENST00000340417 BRDTQ58F21 947 aaPredicted RBP14.89□□□□□ -0.03
LIN54-201ENST00000340417 CIAPIN1Q6FI81 312 aa14.89□□□□□ -0.03
LIN54-201ENST00000340417 SPATA5Q8NB90 893 aa14.89□□□□□ -0.03
LIN54-201ENST00000340417 SSFA2P28290 1259 aa14.88□□□□□ -0.03
LIN54-201ENST00000340417 CCDC125Q86Z20 511 aa14.88□□□□□ -0.03
LIN54-201ENST00000340417 NOD1Q9Y239 953 aa14.88□□□□□ -0.03
LIN54-201ENST00000340417 ZNF804BA4D1E1 1349 aa14.88□□□□□ -0.03
LIN54-201ENST00000340417 WDR33Q9C0J8 1336 aaKnown RBP14.88□□□□□ -0.03
LIN54-201ENST00000340417 ERVV-1B6SEH8 477 aa14.88□□□□□ -0.03
LIN54-201ENST00000340417 ARMC9Q7Z3E5 817 aa14.88□□□□□ -0.03
LIN54-201ENST00000340417 SPATA31A5Q5VU36 1347 aa14.88□□□□□ -0.03
LIN54-201ENST00000340417 SPATA31A7Q8IWB4 1347 aa14.88□□□□□ -0.03
LIN54-201ENST00000340417 KRT85P78386 507 aa14.88□□□□□ -0.03
LIN54-201ENST00000340417 CHRNDQ07001 517 aa14.88□□□□□ -0.03
LIN54-201ENST00000340417 TTC22Q5TAA0 569 aa14.88□□□□□ -0.03
LIN54-201ENST00000340417 ZC3H13Q5T200 1668 aaKnown RBP14.88□□□□□ -0.03
LIN54-201ENST00000340417 GADL1Q6ZQY3 521 aa14.88□□□□□ -0.03
LIN54-201ENST00000340417 BARGINQ6ZT62 677 aa14.88□□□□□ -0.03
LIN54-201ENST00000340417 LEMD3Q9Y2U8 911 aa14.88□□□□□ -0.03
LIN54-201ENST00000340417 PPRC1Q5VV67 1664 aaKnown RBP14.87□□□□□ -0.03
LIN54-201ENST00000340417 GUCY1B3Q02153 619 aa14.87□□□□□ -0.03
LIN54-201ENST00000340417 EZH2Q15910 746 aaKnown RBP14.87□□□□□ -0.03
LIN54-201ENST00000340417 MAPKAPK5Q8IW41 473 aa14.87□□□□□ -0.03
LIN54-201ENST00000340417 RRP36Q96EU6 259 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms