RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 BECN1Q14457 450 aa8.68□□□□□ -1.02
NUP43-201ENST00000340413 UBE3CQ15386 1083 aa8.68□□□□□ -1.02
NUP43-201ENST00000340413 TM6SF1Q9BZW5 370 aa8.68□□□□□ -1.02
NUP43-201ENST00000340413 SUGT1Q9Y2Z0 365 aa8.68□□□□□ -1.02
NUP43-201ENST00000340413 DDR1Q08345 913 aa8.68□□□□□ -1.02
NUP43-201ENST00000340413 TTC39AQ5SRH9 613 aa8.68□□□□□ -1.02
NUP43-201ENST00000340413 FAM182BQ5T319 152 aa8.68□□□□□ -1.02
NUP43-201ENST00000340413 ZGPATQ8N5A5 531 aaKnown RBP8.68□□□□□ -1.02
NUP43-201ENST00000340413 PAG1Q9NWQ8 432 aa8.68□□□□□ -1.02
NUP43-201ENST00000340413 DENND2AQ9ULE3 1009 aa8.68□□□□□ -1.02
NUP43-201ENST00000340413 FBXO33Q7Z6M2 555 aa8.67□□□□□ -1.02
NUP43-201ENST00000340413 DBNDD2Q9BQY9 259 aa8.67□□□□□ -1.02
NUP43-201ENST00000340413 ARFGEF1Q9Y6D6 1849 aa8.67□□□□□ -1.02
NUP43-201ENST00000340413 SNED1Q8TER0 1413 aa8.67□□□□□ -1.02
NUP43-201ENST00000340413 LAMB1P07942 1786 aa8.67□□□□□ -1.02
NUP43-201ENST00000340413 HCLS1P14317 486 aaPredicted RBP8.67□□□□□ -1.02
NUP43-201ENST00000340413 CHRNDQ07001 517 aa8.67□□□□□ -1.02
NUP43-201ENST00000340413 RPGRQ92834 1020 aaKnown RBP8.67□□□□□ -1.02
NUP43-201ENST00000340413 MASTLQ96GX5 879 aa8.67□□□□□ -1.02
NUP43-201ENST00000340413 DSCC1Q9BVC3 393 aa8.67□□□□□ -1.02
NUP43-201ENST00000340413 DIAPH3Q9NSV4 1193 aa8.67□□□□□ -1.02
NUP43-201ENST00000340413 MINPP1Q9UNW1 487 aa8.67□□□□□ -1.02
NUP43-201ENST00000340413 COL4A1P02462 1669 aa8.67□□□□□ -1.02
NUP43-201ENST00000340413 ZMYM1Q5SVZ6 1142 aa8.67□□□□□ -1.02
NUP43-201ENST00000340413 SOGA3Q5TF21 947 aa8.67□□□□□ -1.02
NUP43-201ENST00000340413 AMIGO3Q86WK7 504 aa8.67□□□□□ -1.02
NUP43-201ENST00000340413 IPO9Q96P70 1041 aaKnown RBP8.67□□□□□ -1.02
NUP43-201ENST00000340413 SIL1Q9H173 461 aa8.67□□□□□ -1.02
NUP43-201ENST00000340413 FOCADQ5VW36 1801 aa8.67□□□□□ -1.02
NUP43-201ENST00000340413 ARXQ96QS3 562 aa8.66□□□□□ -1.02
NUP43-201ENST00000340413 RGS22Q8NE09 1264 aa8.66□□□□□ -1.02
NUP43-201ENST00000340413 RTFDC1Q9BY42 306 aaPredicted RBP8.66□□□□□ -1.02
NUP43-201ENST00000340413 PUS3Q9BZE2 481 aaKnown RBP8.66□□□□□ -1.02
NUP43-201ENST00000340413 WDR19Q8NEZ3 1342 aa8.66□□□□□ -1.02
NUP43-201ENST00000340413 RNF113AO15541 343 aaKnown RBP8.66□□□□□ -1.02
NUP43-201ENST00000340413 HSPA4P34932 840 aa8.66□□□□□ -1.02
NUP43-201ENST00000340413 KRT32Q14532 448 aa8.66□□□□□ -1.02
NUP43-201ENST00000340413 ALX1Q15699 326 aa8.66□□□□□ -1.02
NUP43-201ENST00000340413 CAVIN4Q5BKX8 364 aa8.66□□□□□ -1.02
NUP43-201ENST00000340413 U3KPZ7 1027 aaPredicted RBP8.66□□□□□ -1.02
NUP43-201ENST00000340413 CACNA1SQ13698 1873 aa8.66□□□□□ -1.02
NUP43-201ENST00000340413 TRIM6-TRIM34B2RNG4 842 aa8.65□□□□□ -1.02
NUP43-201ENST00000340413 PDIA4P13667 645 aaKnown RBP8.65□□□□□ -1.02
NUP43-201ENST00000340413 GNAT2P19087 354 aa8.65□□□□□ -1.02
NUP43-201ENST00000340413 SPTY2D1Q68D10 685 aaPredicted RBP8.65□□□□□ -1.02
NUP43-201ENST00000340413 SUPT20HQ8NEM7 779 aa8.65□□□□□ -1.02
NUP43-201ENST00000340413 CNKSR1Q969H4 720 aa8.65□□□□□ -1.02
NUP43-201ENST00000340413 CHMP4CQ96CF2 233 aa8.65□□□□□ -1.02
NUP43-201ENST00000340413 ZNF594Q96JF6 807 aaPredicted RBP8.65□□□□□ -1.02
NUP43-201ENST00000340413 LSG1Q9H089 658 aaKnown RBP8.65□□□□□ -1.02
NUP43-201ENST00000340413 CCDC8Q9H0W5 538 aaPredicted RBP8.65□□□□□ -1.02
NUP43-201ENST00000340413 ATP6V0A2Q9Y487 856 aa8.65□□□□□ -1.02
NUP43-201ENST00000340413 FBXL16Q8N461 479 aa8.65□□□□□ -1.02
NUP43-201ENST00000340413 KLHDC4Q8TBB5 520 aa8.65□□□□□ -1.02
NUP43-201ENST00000340413 MTA3Q9BTC8 594 aa8.65□□□□□ -1.02
NUP43-201ENST00000340413 SRGNP10124 158 aa8.65□□□□□ -1.03
NUP43-201ENST00000340413 EZH2Q15910 746 aaKnown RBP8.65□□□□□ -1.03
NUP43-201ENST00000340413 MCMDC2Q4G0Z9 681 aa8.65□□□□□ -1.03
NUP43-201ENST00000340413 CCDC102BQ68D86 513 aa8.65□□□□□ -1.03
NUP43-201ENST00000340413 KIAA1211Q6ZU35 1233 aa8.65□□□□□ -1.03
NUP43-201ENST00000340413 TLR7Q9NYK1 1049 aaKnown RBP8.65□□□□□ -1.03
NUP43-201ENST00000340413 DDX60LQ5H9U9 1706 aaKnown RBP8.65□□□□□ -1.03
NUP43-201ENST00000340413 GORABQ5T7V8 394 aa8.64□□□□□ -1.03
NUP43-201ENST00000340413 RNF20Q5VTR2 975 aa8.64□□□□□ -1.03
NUP43-201ENST00000340413 GIMAP6Q6P9H5 292 aa8.64□□□□□ -1.03
NUP43-201ENST00000340413 APPBP2Q92624 585 aa8.64□□□□□ -1.03
NUP43-201ENST00000340413 MAP4K1Q92918 833 aa8.64□□□□□ -1.03
NUP43-201ENST00000340413 CCDC171Q6TFL3 1326 aa8.64□□□□□ -1.03
NUP43-201ENST00000340413 FAM205AQ6ZU69 1335 aa8.64□□□□□ -1.03
NUP43-201ENST00000340413 PHF14O94880 888 aa8.64□□□□□ -1.03
NUP43-201ENST00000340413 IL1R1P14778 569 aa8.64□□□□□ -1.03
NUP43-201ENST00000340413 TGFB2P61812 414 aa8.64□□□□□ -1.03
NUP43-201ENST00000340413 SYNE4Q8N205 404 aa8.64□□□□□ -1.03
NUP43-201ENST00000340413 JARID2Q92833 1246 aaPredicted RBP8.64□□□□□ -1.03
NUP43-201ENST00000340413 FSD1Q9BTV5 496 aa8.64□□□□□ -1.03
NUP43-201ENST00000340413 PCP11498 1178 aaKnown RBP8.64□□□□□ -1.03
NUP43-201ENST00000340413 ZNF804AQ7Z570 1209 aa8.64□□□□□ -1.03
NUP43-201ENST00000340413 EYA3Q99504 573 aa8.64□□□□□ -1.03
NUP43-201ENST00000340413 SEC31BQ9NQW1 1179 aa8.64□□□□□ -1.03
NUP43-201ENST00000340413 CTNNA3Q9UI47 895 aa8.64□□□□□ -1.03
NUP43-201ENST00000340413 SPATA5Q8NB90 893 aa8.63□□□□□ -1.03
NUP43-201ENST00000340413 TBC1D22AQ8WUA7 517 aa8.63□□□□□ -1.03
NUP43-201ENST00000340413 RILPL2Q969X0 211 aa8.63□□□□□ -1.03
NUP43-201ENST00000340413 MRIQ9BWK5 157 aa8.63□□□□□ -1.03
NUP43-201ENST00000340413 APBB1O00213 710 aa8.63□□□□□ -1.03
NUP43-201ENST00000340413 PPEF1O14829 653 aaPredicted RBP8.63□□□□□ -1.03
NUP43-201ENST00000340413 WDR66Q8TBY9 1149 aa8.63□□□□□ -1.03
NUP43-201ENST00000340413 NEUROD6Q96NK8 337 aa8.63□□□□□ -1.03
NUP43-201ENST00000340413 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.63□□□□□ -1.03
NUP43-201ENST00000340413 HMGB1P09429 215 aaKnown RBP8.63□□□□□ -1.03
NUP43-201ENST00000340413 ADD2P35612 726 aa8.63□□□□□ -1.03
NUP43-201ENST00000340413 MAP3K12Q12852 859 aa8.63□□□□□ -1.03
NUP43-201ENST00000340413 C3orf67Q6ZVT6 689 aa8.63□□□□□ -1.03
NUP43-201ENST00000340413 CELF1Q92879 486 aaKnown RBP8.63□□□□□ -1.03
NUP43-201ENST00000340413 GSTO1P78417 241 aa8.62□□□□□ -1.03
NUP43-201ENST00000340413 TDRD7Q8NHU6 1098 aaKnown RBP8.62□□□□□ -1.03
NUP43-201ENST00000340413 TMX4Q9H1E5 349 aaPredicted RBP8.62□□□□□ -1.03
NUP43-201ENST00000340413 COL2A1P02458 1487 aaPredicted RBP8.62□□□□□ -1.03
NUP43-201ENST00000340413 CHD4Q14839 1912 aa8.62□□□□□ -1.03
NUP43-201ENST00000340413 PSMA5P28066 241 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms