RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 ESR2Q92731 530 aa17■□□□□ 0.31
RET-201ENST00000340058 CRNKL1Q9BZJ0 848 aaKnown RBP17■□□□□ 0.31
RET-201ENST00000340058 STIM1Q13586 685 aa16.99■□□□□ 0.31
RET-201ENST00000340058 LUZP1Q86V48 1076 aa16.99■□□□□ 0.31
RET-201ENST00000340058 SMARCC1Q92922 1105 aaPredicted RBP16.99■□□□□ 0.31
RET-201ENST00000340058 MAGEB6P1A0A0J9YX57 407 aa16.99■□□□□ 0.31
RET-201ENST00000340058 LMOD1P29536 600 aaPredicted RBP16.99■□□□□ 0.31
RET-201ENST00000340058 PDE4BQ07343 736 aa16.99■□□□□ 0.31
RET-201ENST00000340058 TCIRG1Q13488 830 aa16.99■□□□□ 0.31
RET-201ENST00000340058 PI16Q6UXB8 463 aa16.99■□□□□ 0.31
RET-201ENST00000340058 CCDC186Q7Z3E2 898 aa16.99■□□□□ 0.31
RET-201ENST00000340058 ZSCAN16Q9H4T2 348 aaPredicted RBP16.99■□□□□ 0.31
RET-201ENST00000340058 DBNLQ9UJU6 430 aaKnown RBP16.99■□□□□ 0.31
RET-201ENST00000340058 KIF1BO60333 1816 aa16.99■□□□□ 0.31
RET-201ENST00000340058 SMTNL1A8MU46 457 aa16.99■□□□□ 0.31
RET-201ENST00000340058 ME3Q16798 604 aa16.99■□□□□ 0.31
RET-201ENST00000340058 SLFNL1Q499Z3 407 aa16.99■□□□□ 0.31
RET-201ENST00000340058 ZNF335Q9H4Z2 1342 aaPredicted RBP16.99■□□□□ 0.31
RET-201ENST00000340058 EIF5P55010 431 aaKnown RBP16.98■□□□□ 0.31
RET-201ENST00000340058 CDC37L1Q7L3B6 337 aa16.98■□□□□ 0.31
RET-201ENST00000340058 ZBTB9Q96C00 473 aa16.98■□□□□ 0.31
RET-201ENST00000340058 IBTKQ9P2D0 1353 aaPredicted RBP16.98■□□□□ 0.31
RET-201ENST00000340058 BAG3O95817 575 aa16.98■□□□□ 0.31
RET-201ENST00000340058 PHKBQ93100 1093 aa16.98■□□□□ 0.31
RET-201ENST00000340058 SMARCE1Q969G3 411 aa16.98■□□□□ 0.31
RET-201ENST00000340058 DACH1Q9UI36 760 aa16.98■□□□□ 0.31
RET-201ENST00000340058 CEP131Q9UPN4 1083 aa16.98■□□□□ 0.31
RET-201ENST00000340058 ATP7BP35670 1465 aa16.98■□□□□ 0.31
RET-201ENST00000340058 ADORA1P30542 326 aa16.98■□□□□ 0.31
RET-201ENST00000340058 ZBTB1Q9Y2K1 713 aa16.98■□□□□ 0.31
RET-201ENST00000340058 TET3O43151 1660 aa16.98■□□□□ 0.31
RET-201ENST00000340058 UBA5Q9GZZ9 404 aa16.98■□□□□ 0.31
RET-201ENST00000340058 DEF6Q9H4E7 631 aa16.98■□□□□ 0.31
RET-201ENST00000340058 ZFYVE27Q5T4F4 411 aa16.97■□□□□ 0.31
RET-201ENST00000340058 TMOD2Q9NZR1 351 aa16.97■□□□□ 0.31
RET-201ENST00000340058 CCNL1Q9UK58 526 aaPredicted RBP16.97■□□□□ 0.31
RET-201ENST00000340058 TYRO3Q06418 890 aa16.97■□□□□ 0.31
RET-201ENST00000340058 CCDC102BQ68D86 513 aa16.97■□□□□ 0.31
RET-201ENST00000340058 AOPEPQ8N6M6 819 aa16.97■□□□□ 0.31
RET-201ENST00000340058 MAP3K4Q9Y6R4 1608 aa16.97■□□□□ 0.31
RET-201ENST00000340058 RNF17Q9BXT8 1623 aaKnown RBP16.97■□□□□ 0.31
RET-201ENST00000340058 SNAP23O00161 211 aa16.97■□□□□ 0.31
RET-201ENST00000340058 CTDSPL2Q05D32 466 aa16.97■□□□□ 0.31
RET-201ENST00000340058 NOM1Q5C9Z4 860 aaKnown RBP16.97■□□□□ 0.31
RET-201ENST00000340058 SPECC1Q5M775 1068 aa16.97■□□□□ 0.31
RET-201ENST00000340058 CCDC70Q6NSX1 233 aa16.97■□□□□ 0.31
RET-201ENST00000340058 MRPS27Q92552 414 aaKnown RBP16.97■□□□□ 0.31
RET-201ENST00000340058 SPTLC2O15270 562 aa16.96■□□□□ 0.31
RET-201ENST00000340058 CYP27B1O15528 508 aa16.96■□□□□ 0.31
RET-201ENST00000340058 TOP1P11387 765 aaKnown RBP16.96■□□□□ 0.31
RET-201ENST00000340058 DNA2P51530 1060 aa16.96■□□□□ 0.31
RET-201ENST00000340058 PLIN2Q99541 437 aa16.96■□□□□ 0.31
RET-201ENST00000340058 ZNF287Q9HBT7 754 aa16.96■□□□□ 0.31
RET-201ENST00000340058 TMEM63CQ9P1W3 806 aa16.96■□□□□ 0.31
RET-201ENST00000340058 PDE8AO60658 829 aa16.96■□□□□ 0.31
RET-201ENST00000340058 TSPY3P0CV98 308 aa16.96■□□□□ 0.31
RET-201ENST00000340058 TSPY8P0CW00 308 aa16.96■□□□□ 0.31
RET-201ENST00000340058 STX1AQ16623 288 aa16.96■□□□□ 0.31
RET-201ENST00000340058 ZNHIT6Q9NWK9 470 aaKnown RBP16.96■□□□□ 0.31
RET-201ENST00000340058 SAP30BPQ9UHR5 308 aaKnown RBP16.96■□□□□ 0.31
RET-201ENST00000340058 LDHCP07864 332 aa16.96■□□□□ 0.31
RET-201ENST00000340058 UBA7P41226 1012 aa16.96■□□□□ 0.31
RET-201ENST00000340058 HEATR3Q7Z4Q2 680 aa16.96■□□□□ 0.31
RET-201ENST00000340058 CMTR1Q8N1G2 835 aaKnown RBP16.96■□□□□ 0.31
RET-201ENST00000340058 ANTXR1Q9H6X2 564 aa16.96■□□□□ 0.31
RET-201ENST00000340058 APPBP2Q92624 585 aa16.95■□□□□ 0.3
RET-201ENST00000340058 LMBRD1Q9NUN5 540 aa16.95■□□□□ 0.3
RET-201ENST00000340058 CCDC87Q9NVE4 849 aa16.95■□□□□ 0.3
RET-201ENST00000340058 PTPN14Q15678 1187 aa16.95■□□□□ 0.3
RET-201ENST00000340058 CT47A1Q5JQC4 288 aaPredicted RBP16.95■□□□□ 0.3
RET-201ENST00000340058 KRT23Q9C075 422 aa16.95■□□□□ 0.3
RET-201ENST00000340058 GREM2Q9H772 168 aa16.95■□□□□ 0.3
RET-201ENST00000340058 EPHA10Q5JZY3 1008 aa16.95■□□□□ 0.3
RET-201ENST00000340058 SYNE4Q8N205 404 aa16.95■□□□□ 0.3
RET-201ENST00000340058 ZNF532Q9HCE3 1301 aa16.95■□□□□ 0.3
RET-201ENST00000340058 ADCY10Q96PN6 1610 aa16.95■□□□□ 0.3
RET-201ENST00000340058 CBFA2T2O43439 604 aa16.94■□□□□ 0.3
RET-201ENST00000340058 ATP5JP18859 108 aa16.94■□□□□ 0.3
RET-201ENST00000340058 BMP2KQ9NSY1 1161 aaPredicted RBP16.94■□□□□ 0.3
RET-201ENST00000340058 TPCN1Q9ULQ1 816 aa16.94■□□□□ 0.3
RET-201ENST00000340058 TNNT1P13805 278 aa16.94■□□□□ 0.3
RET-201ENST00000340058 STX17P56962 302 aa16.94■□□□□ 0.3
RET-201ENST00000340058 ZNF589Q86UQ0 364 aaPredicted RBP16.94■□□□□ 0.3
RET-201ENST00000340058 ARGLU1Q9NWB6 273 aaPredicted RBP16.94■□□□□ 0.3
RET-201ENST00000340058 CTAGE5O15320 804 aa16.94■□□□□ 0.3
RET-201ENST00000340058 URI1O94763 535 aaPredicted RBP16.94■□□□□ 0.3
RET-201ENST00000340058 FAM200AQ8TCP9 573 aa16.94■□□□□ 0.3
RET-201ENST00000340058 UIMC1Q96RL1 719 aa16.94■□□□□ 0.3
RET-201ENST00000340058 EIF6P56537 245 aaKnown RBP16.94■□□□□ 0.3
RET-201ENST00000340058 PUM3Q15397 648 aaKnown RBP16.94■□□□□ 0.3
RET-201ENST00000340058 C17orf53Q8N3J3 647 aaPredicted RBP16.94■□□□□ 0.3
RET-201ENST00000340058 DHX58Q96C10 678 aa16.94■□□□□ 0.3
RET-201ENST00000340058 GYG1P46976 350 aa16.93■□□□□ 0.3
RET-201ENST00000340058 GAS2L3Q86XJ1 694 aa16.93■□□□□ 0.3
RET-201ENST00000340058 KDRP35968 1356 aa16.93■□□□□ 0.3
RET-201ENST00000340058 BCAMP50895 628 aa16.93■□□□□ 0.3
RET-201ENST00000340058 ARHGAP29Q52LW3 1261 aa16.93■□□□□ 0.3
RET-201ENST00000340058 ZC3H12CQ9C0D7 883 aaKnown RBP16.93■□□□□ 0.3
RET-201ENST00000340058 ARHGAP31Q2M1Z3 1444 aa16.93■□□□□ 0.3
RET-201ENST00000340058 ERVV-2B6SEH9 535 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms