RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 KLHL34Q8N239 644 aa7.3□□□□□ -1.24
PRKDC-202ENST00000338368 KCNG4Q8TDN1 519 aa7.3□□□□□ -1.24
PRKDC-202ENST00000338368 GPR108Q9NPR9 543 aa7.3□□□□□ -1.24
PRKDC-202ENST00000338368 PTPRUQ92729 1446 aa7.3□□□□□ -1.24
PRKDC-202ENST00000338368 MBD4O95243 580 aa7.3□□□□□ -1.24
PRKDC-202ENST00000338368 PI4K2BQ8TCG2 481 aa7.3□□□□□ -1.24
PRKDC-202ENST00000338368 PUS3Q9BZE2 481 aaKnown RBP7.3□□□□□ -1.24
PRKDC-202ENST00000338368 BCL11BQ9C0K0 894 aaPredicted RBP7.3□□□□□ -1.24
PRKDC-202ENST00000338368 ANTXR1Q9H6X2 564 aa7.3□□□□□ -1.24
PRKDC-202ENST00000338368 CBFA2T2O43439 604 aa7.29□□□□□ -1.24
PRKDC-202ENST00000338368 POLA2Q14181 598 aa7.29□□□□□ -1.24
PRKDC-202ENST00000338368 BIN1O00499 593 aa7.29□□□□□ -1.24
PRKDC-202ENST00000338368 ADCK5Q3MIX3 580 aa7.29□□□□□ -1.24
PRKDC-202ENST00000338368 CLIP2Q9UDT6 1046 aa7.29□□□□□ -1.24
PRKDC-202ENST00000338368 GPAA1O43292 621 aa7.29□□□□□ -1.24
PRKDC-202ENST00000338368 GNAT2P19087 354 aa7.29□□□□□ -1.24
PRKDC-202ENST00000338368 SF3B2Q13435 895 aaKnown RBP7.29□□□□□ -1.24
PRKDC-202ENST00000338368 ME3Q16798 604 aa7.29□□□□□ -1.24
PRKDC-202ENST00000338368 MAP4K1Q92918 833 aa7.29□□□□□ -1.24
PRKDC-202ENST00000338368 ZSWIM6Q9HCJ5 1215 aa7.29□□□□□ -1.24
PRKDC-202ENST00000338368 MAGEB6P1A0A0J9YX57 407 aa7.29□□□□□ -1.24
PRKDC-202ENST00000338368 FAM98CQ17RN3 349 aaKnown RBP7.29□□□□□ -1.24
PRKDC-202ENST00000338368 CFAP100Q494V2 611 aa7.29□□□□□ -1.24
PRKDC-202ENST00000338368 MNS1Q8NEH6 495 aa7.29□□□□□ -1.24
PRKDC-202ENST00000338368 MRPS27Q92552 414 aaKnown RBP7.29□□□□□ -1.24
PRKDC-202ENST00000338368 BAG3O95817 575 aa7.29□□□□□ -1.24
PRKDC-202ENST00000338368 FAM200AQ8TCP9 573 aa7.29□□□□□ -1.24
PRKDC-202ENST00000338368 SSH2Q76I76 1423 aa7.29□□□□□ -1.24
PRKDC-202ENST00000338368 CPS1P31327 1500 aa7.29□□□□□ -1.24
PRKDC-202ENST00000338368 ISM2Q6H9L7 571 aa7.29□□□□□ -1.24
PRKDC-202ENST00000338368 MAGEB6Q8N7X4 407 aa7.29□□□□□ -1.24
PRKDC-202ENST00000338368 DSCC1Q9BVC3 393 aa7.29□□□□□ -1.24
PRKDC-202ENST00000338368 KAT14Q9H8E8 782 aa7.29□□□□□ -1.24
PRKDC-202ENST00000338368 PKP1Q13835 747 aa7.29□□□□□ -1.24
PRKDC-202ENST00000338368 SLC4A8Q2Y0W8 1093 aa7.29□□□□□ -1.24
PRKDC-202ENST00000338368 SPTY2D1Q68D10 685 aaPredicted RBP7.29□□□□□ -1.24
PRKDC-202ENST00000338368 STX8Q9UNK0 236 aa7.29□□□□□ -1.24
PRKDC-202ENST00000338368 ZBTB1Q9Y2K1 713 aa7.29□□□□□ -1.24
PRKDC-202ENST00000338368 LAMC1P11047 1609 aa7.29□□□□□ -1.24
PRKDC-202ENST00000338368 TCEAL9Q9UHQ7 104 aa7.28□□□□□ -1.24
PRKDC-202ENST00000338368 GNPATO15228 680 aa7.28□□□□□ -1.24
PRKDC-202ENST00000338368 CCDC194A0A1B0GVG4 234 aa7.28□□□□□ -1.24
PRKDC-202ENST00000338368 CAVIN2O95810 425 aa7.28□□□□□ -1.24
PRKDC-202ENST00000338368 PUM3Q15397 648 aaKnown RBP7.28□□□□□ -1.24
PRKDC-202ENST00000338368 DENND2AQ9ULE3 1009 aa7.28□□□□□ -1.24
PRKDC-202ENST00000338368 SPTLC2O15270 562 aa7.28□□□□□ -1.24
PRKDC-202ENST00000338368 RXRAP19793 462 aa7.28□□□□□ -1.24
PRKDC-202ENST00000338368 TECPR2O15040 1411 aa7.28□□□□□ -1.24
PRKDC-202ENST00000338368 CRB1P82279 1406 aa7.28□□□□□ -1.24
PRKDC-202ENST00000338368 ANO6Q4KMQ2 910 aa7.28□□□□□ -1.24
PRKDC-202ENST00000338368 CCDC102BQ68D86 513 aa7.28□□□□□ -1.24
PRKDC-202ENST00000338368 ARMT1Q9H993 441 aa7.28□□□□□ -1.24
PRKDC-202ENST00000338368 SMARCE1Q969G3 411 aa7.28□□□□□ -1.24
PRKDC-202ENST00000338368 ZKSCAN3Q9BRR0 538 aa7.28□□□□□ -1.24
PRKDC-202ENST00000338368 HEG1Q9ULI3 1381 aa7.28□□□□□ -1.24
PRKDC-202ENST00000338368 H7C1W4 665 aa7.28□□□□□ -1.24
PRKDC-202ENST00000338368 CLCN1P35523 988 aa7.28□□□□□ -1.24
PRKDC-202ENST00000338368 HAUS7Q99871 368 aa7.28□□□□□ -1.24
PRKDC-202ENST00000338368 ZNF219Q9P2Y4 722 aaPredicted RBP7.28□□□□□ -1.24
PRKDC-202ENST00000338368 LRRC7Q96NW7 1537 aa7.28□□□□□ -1.24
PRKDC-202ENST00000338368 KRT18P05783 430 aaKnown RBP7.28□□□□□ -1.24
PRKDC-202ENST00000338368 DLC1Q96QB1 1528 aa7.28□□□□□ -1.24
PRKDC-202ENST00000338368 B4E1Z4 1266 aa7.28□□□□□ -1.24
PRKDC-202ENST00000338368 GADD45BO75293 160 aaPredicted RBP7.28□□□□□ -1.24
PRKDC-202ENST00000338368 IFIT1BQ5T764 474 aaKnown RBP7.28□□□□□ -1.24
PRKDC-202ENST00000338368 MAGEC2Q9UBF1 373 aaPredicted RBP7.28□□□□□ -1.24
PRKDC-202ENST00000338368 E7EWF7 191 aa7.27□□□□□ -1.24
PRKDC-202ENST00000338368 RBM10P98175 930 aaKnown RBP7.27□□□□□ -1.24
PRKDC-202ENST00000338368 NCOA5Q9HCD5 579 aaKnown RBP7.27□□□□□ -1.24
PRKDC-202ENST00000338368 MAP3K15Q6ZN16 1313 aa7.27□□□□□ -1.25
PRKDC-202ENST00000338368 SLF2Q8IX21 1173 aa7.27□□□□□ -1.25
PRKDC-202ENST00000338368 RBSNQ9H1K0 784 aa7.27□□□□□ -1.25
PRKDC-202ENST00000338368 FBXO3Q9UK99 471 aa7.27□□□□□ -1.25
PRKDC-202ENST00000338368 CTSWP56202 376 aa7.27□□□□□ -1.25
PRKDC-202ENST00000338368 DNAJC25Q9H1X3 360 aa7.27□□□□□ -1.25
PRKDC-202ENST00000338368 FRMPD1Q5SYB0 1578 aa7.27□□□□□ -1.25
PRKDC-202ENST00000338368 ST5P78524 1137 aa7.27□□□□□ -1.25
PRKDC-202ENST00000338368 CHAMP1Q96JM3 812 aa7.27□□□□□ -1.25
PRKDC-202ENST00000338368 ANKRD2Q9GZV1 360 aa7.27□□□□□ -1.25
PRKDC-202ENST00000338368 TMEM63CQ9P1W3 806 aa7.27□□□□□ -1.25
PRKDC-202ENST00000338368 GSTO1P78417 241 aa7.27□□□□□ -1.25
PRKDC-202ENST00000338368 CUL4AQ13619 759 aa7.27□□□□□ -1.25
PRKDC-202ENST00000338368 NECTIN1Q15223 517 aa7.27□□□□□ -1.25
PRKDC-202ENST00000338368 TTLL5Q6EMB2 1281 aa7.27□□□□□ -1.25
PRKDC-202ENST00000338368 CRACR2BQ8N4Y2 399 aaPredicted RBP7.27□□□□□ -1.25
PRKDC-202ENST00000338368 HSPD1P10809 573 aaKnown RBP7.27□□□□□ -1.25
PRKDC-202ENST00000338368 RTN1Q16799 776 aa7.27□□□□□ -1.25
PRKDC-202ENST00000338368 ATL3Q6DD88 541 aa7.27□□□□□ -1.25
PRKDC-202ENST00000338368 TPCN1Q9ULQ1 816 aa7.27□□□□□ -1.25
PRKDC-202ENST00000338368 ZNF532Q9HCE3 1301 aa7.27□□□□□ -1.25
PRKDC-202ENST00000338368 ZNF445P59923 1031 aa7.27□□□□□ -1.25
PRKDC-202ENST00000338368 EPHA10Q5JZY3 1008 aa7.27□□□□□ -1.25
PRKDC-202ENST00000338368 CCNL1Q9UK58 526 aaPredicted RBP7.27□□□□□ -1.25
PRKDC-202ENST00000338368 MPHOSPH10O00566 681 aaKnown RBP7.27□□□□□ -1.25
PRKDC-202ENST00000338368 BRAPQ7Z569 592 aa7.27□□□□□ -1.25
PRKDC-202ENST00000338368 TMEM87BQ96K49 555 aa7.27□□□□□ -1.25
PRKDC-202ENST00000338368 CCDC43Q96MW1 224 aaKnown RBP7.27□□□□□ -1.25
PRKDC-202ENST00000338368 PIK3C2BO00750 1634 aa7.27□□□□□ -1.25
PRKDC-202ENST00000338368 CYP21A2P08686 494 aa7.27□□□□□ -1.25
PRKDC-202ENST00000338368 HIBADHP31937 336 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms