RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 DPY19L2Q6NUT2 758 aa14.7□□□□□ -0.06
SPTLC1-202ENST00000337841 VGLL2Q8N8G2 317 aa14.7□□□□□ -0.06
SPTLC1-202ENST00000337841 GPR101Q96P66 508 aaPredicted RBP14.7□□□□□ -0.06
SPTLC1-202ENST00000337841 DCTPP1Q9H773 170 aa14.7□□□□□ -0.06
SPTLC1-202ENST00000337841 ZNRF3Q9ULT6 936 aa14.7□□□□□ -0.06
SPTLC1-202ENST00000337841 MYCNP04198 464 aaPredicted RBP14.69□□□□□ -0.06
SPTLC1-202ENST00000337841 FGFR2P21802 821 aa14.69□□□□□ -0.06
SPTLC1-202ENST00000337841 HDAC1Q13547 482 aaPredicted RBP14.69□□□□□ -0.06
SPTLC1-202ENST00000337841 ZNF804AQ7Z570 1209 aa14.69□□□□□ -0.06
SPTLC1-202ENST00000337841 PODNQ7Z5L7 613 aa14.69□□□□□ -0.06
SPTLC1-202ENST00000337841 VPS37DQ86XT2 251 aa14.69□□□□□ -0.06
SPTLC1-202ENST00000337841 KIF1BPQ96EK5 621 aa14.69□□□□□ -0.06
SPTLC1-202ENST00000337841 NEUROD6Q96NK8 337 aa14.69□□□□□ -0.06
SPTLC1-202ENST00000337841 COA1Q9GZY4 146 aa14.69□□□□□ -0.06
SPTLC1-202ENST00000337841 GPR108Q9NPR9 543 aa14.69□□□□□ -0.06
SPTLC1-202ENST00000337841 TAF1P21675 1872 aa14.69□□□□□ -0.06
SPTLC1-202ENST00000337841 MED23Q9ULK4 1368 aa14.69□□□□□ -0.06
SPTLC1-202ENST00000337841 ARFGEF1Q9Y6D6 1849 aa14.69□□□□□ -0.06
SPTLC1-202ENST00000337841 ZC3H4Q9UPT8 1303 aaKnown RBP14.68□□□□□ -0.06
SPTLC1-202ENST00000337841 COL4A1P02462 1669 aa14.68□□□□□ -0.06
SPTLC1-202ENST00000337841 HIBADHP31937 336 aaKnown RBP14.68□□□□□ -0.06
SPTLC1-202ENST00000337841 TIMM10P62072 90 aa14.68□□□□□ -0.06
SPTLC1-202ENST00000337841 ZBTB47Q9UFB7 747 aaPredicted RBP14.68□□□□□ -0.06
SPTLC1-202ENST00000337841 U3KPZ7 1027 aaPredicted RBP14.68□□□□□ -0.06
SPTLC1-202ENST00000337841 FZD9O00144 591 aa14.67□□□□□ -0.06
SPTLC1-202ENST00000337841 APBB1O00213 710 aa14.67□□□□□ -0.06
SPTLC1-202ENST00000337841 ECE2O60344 883 aa14.67□□□□□ -0.06
SPTLC1-202ENST00000337841 TNIP1Q15025 636 aa14.67□□□□□ -0.06
SPTLC1-202ENST00000337841 GORABQ5T7V8 394 aa14.67□□□□□ -0.06
SPTLC1-202ENST00000337841 TXNRD3Q86VQ6 643 aa14.67□□□□□ -0.06
SPTLC1-202ENST00000337841 CLASRPQ8N2M8 674 aaKnown RBP14.67□□□□□ -0.06
SPTLC1-202ENST00000337841 RHPN1Q8TCX5 695 aa14.67□□□□□ -0.06
SPTLC1-202ENST00000337841 FAM84BQ96KN1 310 aaPredicted RBP14.67□□□□□ -0.06
SPTLC1-202ENST00000337841 DBNDD1Q9H9R9 158 aa14.67□□□□□ -0.06
SPTLC1-202ENST00000337841 GNL3LQ9NVN8 582 aaKnown RBP14.67□□□□□ -0.06
SPTLC1-202ENST00000337841 A0A1B0GUL7 405 aa14.66□□□□□ -0.06
SPTLC1-202ENST00000337841 KLRK1P26718 216 aa14.66□□□□□ -0.06
SPTLC1-202ENST00000337841 GYG1P46976 350 aa14.66□□□□□ -0.06
SPTLC1-202ENST00000337841 FBXO33Q7Z6M2 555 aa14.66□□□□□ -0.06
SPTLC1-202ENST00000337841 GCC1Q96CN9 775 aa14.66□□□□□ -0.06
SPTLC1-202ENST00000337841 LRRCC1Q9C099 1032 aa14.66□□□□□ -0.06
SPTLC1-202ENST00000337841 CD209Q9NNX6 404 aa14.66□□□□□ -0.06
SPTLC1-202ENST00000337841 FRAT2O75474 233 aaPredicted RBP14.65□□□□□ -0.06
SPTLC1-202ENST00000337841 TNNI3KQ59H18 835 aa14.65□□□□□ -0.06
SPTLC1-202ENST00000337841 CIAPIN1Q6FI81 312 aa14.65□□□□□ -0.06
SPTLC1-202ENST00000337841 XAGE2Q96GT9 111 aa14.65□□□□□ -0.06
SPTLC1-202ENST00000337841 FPGT-TNNI3KV9GXZ4 949 aa14.65□□□□□ -0.06
SPTLC1-202ENST00000337841 CACNA1SQ13698 1873 aa14.64□□□□□ -0.07
SPTLC1-202ENST00000337841 GLTPD2A6NH11 291 aa14.64□□□□□ -0.07
SPTLC1-202ENST00000337841 RAD17O75943 681 aa14.64□□□□□ -0.07
SPTLC1-202ENST00000337841 IL1R1P14778 569 aa14.64□□□□□ -0.07
SPTLC1-202ENST00000337841 YY1P25490 414 aa14.64□□□□□ -0.07
SPTLC1-202ENST00000337841 BCAMP50895 628 aa14.64□□□□□ -0.07
SPTLC1-202ENST00000337841 CXCL9Q07325 125 aa14.64□□□□□ -0.07
SPTLC1-202ENST00000337841 IL1RAPL2Q9NP60 686 aa14.64□□□□□ -0.07
SPTLC1-202ENST00000337841 GJA3Q9Y6H8 435 aa14.64□□□□□ -0.07
SPTLC1-202ENST00000337841 IRS2Q9Y4H2 1338 aa14.64□□□□□ -0.07
SPTLC1-202ENST00000337841 LRRC37AA6NMS7 1700 aa14.63□□□□□ -0.07
SPTLC1-202ENST00000337841 USP17L3A6NCW0 530 aa14.63□□□□□ -0.07
SPTLC1-202ENST00000337841 USP17L4A6NCW7 530 aa14.63□□□□□ -0.07
SPTLC1-202ENST00000337841 IFIT2P09913 472 aaKnown RBP14.63□□□□□ -0.07
SPTLC1-202ENST00000337841 CCDC158Q5M9N0 1113 aa14.63□□□□□ -0.07
SPTLC1-202ENST00000337841 ERICH6BQ5W0A0 696 aa14.63□□□□□ -0.07
SPTLC1-202ENST00000337841 TTLL5Q6EMB2 1281 aa14.63□□□□□ -0.07
SPTLC1-202ENST00000337841 USP17L1Q7RTZ2 530 aa14.63□□□□□ -0.07
SPTLC1-202ENST00000337841 AACSQ86V21 672 aa14.63□□□□□ -0.07
SPTLC1-202ENST00000337841 TDRD7Q8NHU6 1098 aaKnown RBP14.63□□□□□ -0.07
SPTLC1-202ENST00000337841 EAF2Q96CJ1 260 aaPredicted RBP14.63□□□□□ -0.07
SPTLC1-202ENST00000337841 CCDC8Q9H0W5 538 aaPredicted RBP14.63□□□□□ -0.07
SPTLC1-202ENST00000337841 BCL11AQ9H165 835 aa14.63□□□□□ -0.07
SPTLC1-202ENST00000337841 FER1L6Q2WGJ9 1857 aa14.63□□□□□ -0.07
SPTLC1-202ENST00000337841 KDM2BQ8NHM5 1336 aa14.63□□□□□ -0.07
SPTLC1-202ENST00000337841 YDJCA8MPS7 323 aa14.62□□□□□ -0.07
SPTLC1-202ENST00000337841 IGHDP01880 384 aa14.62□□□□□ -0.07
SPTLC1-202ENST00000337841 ADORA1P30542 326 aa14.62□□□□□ -0.07
SPTLC1-202ENST00000337841 ANKRD45Q5TZF3 282 aa14.62□□□□□ -0.07
SPTLC1-202ENST00000337841 STRIP1Q5VSL9 837 aa14.62□□□□□ -0.07
SPTLC1-202ENST00000337841 CCDC102BQ68D86 513 aa14.62□□□□□ -0.07
SPTLC1-202ENST00000337841 GPC2Q8N158 579 aa14.62□□□□□ -0.07
SPTLC1-202ENST00000337841 FBXW7Q969H0 707 aa14.62□□□□□ -0.07
SPTLC1-202ENST00000337841 KCNQ5Q9NR82 932 aa14.62□□□□□ -0.07
SPTLC1-202ENST00000337841 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.62□□□□□ -0.07
SPTLC1-202ENST00000337841 DUOX1Q9NRD9 1551 aa14.61□□□□□ -0.07
SPTLC1-202ENST00000337841 SEMA3EO15041 775 aa14.61□□□□□ -0.07
SPTLC1-202ENST00000337841 DDNO94850 711 aaPredicted RBP14.61□□□□□ -0.07
SPTLC1-202ENST00000337841 VIL1P09327 827 aaKnown RBP14.61□□□□□ -0.07
SPTLC1-202ENST00000337841 UQCRFS1P1P0C7P4 283 aa14.61□□□□□ -0.07
SPTLC1-202ENST00000337841 GTF2IP78347 998 aa14.61□□□□□ -0.07
SPTLC1-202ENST00000337841 DBNDD2Q9BQY9 259 aa14.61□□□□□ -0.07
SPTLC1-202ENST00000337841 PSMD14O00487 310 aa14.6□□□□□ -0.07
SPTLC1-202ENST00000337841 SMARCA5O60264 1052 aaPredicted RBP14.6□□□□□ -0.07
SPTLC1-202ENST00000337841 PHKA1P46020 1223 aa14.6□□□□□ -0.07
SPTLC1-202ENST00000337841 TTC39AQ5SRH9 613 aa14.6□□□□□ -0.07
SPTLC1-202ENST00000337841 SMC5Q8IY18 1101 aa14.6□□□□□ -0.07
SPTLC1-202ENST00000337841 DENND2AQ9ULE3 1009 aa14.6□□□□□ -0.07
SPTLC1-202ENST00000337841 IQSEC3Q9UPP2 1182 aaPredicted RBP14.6□□□□□ -0.07
SPTLC1-202ENST00000337841 ZNF541Q9H0D2 1346 aa14.6□□□□□ -0.07
SPTLC1-202ENST00000337841 RPS12P25398 132 aaKnown RBP14.59□□□□□ -0.07
SPTLC1-202ENST00000337841 CHAF1AQ13111 956 aaPredicted RBP14.59□□□□□ -0.07
SPTLC1-202ENST00000337841 RSBN1LQ6PCB5 846 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms