RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 RSBN1LQ6PCB5 846 aaPredicted RBP13.59□□□□□ -0.23
CAPN3-202ENST00000337571 USP17L1Q7RTZ2 530 aa13.59□□□□□ -0.23
CAPN3-202ENST00000337571 SULF1Q8IWU6 871 aa13.59□□□□□ -0.23
CAPN3-202ENST00000337571 DNAAF4Q8WXU2 420 aa13.59□□□□□ -0.23
CAPN3-202ENST00000337571 MPHOSPH8Q99549 860 aa13.59□□□□□ -0.23
CAPN3-202ENST00000337571 MINPP1Q9UNW1 487 aa13.59□□□□□ -0.23
CAPN3-202ENST00000337571 POLR2AP24928 1970 aaKnown RBP13.59□□□□□ -0.23
CAPN3-202ENST00000337571 COL4A1P02462 1669 aa13.59□□□□□ -0.23
CAPN3-202ENST00000337571 FANCIQ9NVI1 1328 aa13.59□□□□□ -0.23
CAPN3-202ENST00000337571 RTL9Q8NET4 1388 aa13.58□□□□□ -0.23
CAPN3-202ENST00000337571 AOC2O75106 756 aa13.58□□□□□ -0.24
CAPN3-202ENST00000337571 USP17L8P0C7I0 530 aa13.58□□□□□ -0.24
CAPN3-202ENST00000337571 HSPA8P11142 646 aaKnown RBP13.58□□□□□ -0.24
CAPN3-202ENST00000337571 HUNKP57058 714 aa13.58□□□□□ -0.24
CAPN3-202ENST00000337571 EXOSC9Q06265 439 aaKnown RBP13.58□□□□□ -0.24
CAPN3-202ENST00000337571 FAM9BQ8IZU0 186 aa13.58□□□□□ -0.24
CAPN3-202ENST00000337571 SPDYE1Q8NFV5 336 aaPredicted RBP13.58□□□□□ -0.24
CAPN3-202ENST00000337571 LINS1Q8NG48 757 aa13.58□□□□□ -0.24
CAPN3-202ENST00000337571 ANKRD2Q9GZV1 360 aa13.58□□□□□ -0.24
CAPN3-202ENST00000337571 CA12O43570 354 aa13.57□□□□□ -0.24
CAPN3-202ENST00000337571 VAMP4O75379 141 aa13.57□□□□□ -0.24
CAPN3-202ENST00000337571 EGFRP00533 1210 aa13.57□□□□□ -0.24
CAPN3-202ENST00000337571 CCT4P50991 539 aaKnown RBP13.57□□□□□ -0.24
CAPN3-202ENST00000337571 OGFOD1Q8N543 542 aa13.57□□□□□ -0.24
CAPN3-202ENST00000337571 FBXW7Q969H0 707 aa13.57□□□□□ -0.24
CAPN3-202ENST00000337571 LEMD3Q9Y2U8 911 aa13.57□□□□□ -0.24
CAPN3-202ENST00000337571 SPEF2Q9C093 1822 aa13.57□□□□□ -0.24
CAPN3-202ENST00000337571 ITGA6P23229 1130 aa13.56□□□□□ -0.24
CAPN3-202ENST00000337571 KCNJ4P48050 445 aa13.56□□□□□ -0.24
CAPN3-202ENST00000337571 ZNF280AP59817 542 aaPredicted RBP13.56□□□□□ -0.24
CAPN3-202ENST00000337571 SCARF1Q14162 830 aa13.56□□□□□ -0.24
CAPN3-202ENST00000337571 CCDC102AQ96A19 550 aa13.56□□□□□ -0.24
CAPN3-202ENST00000337571 PLA2G12BQ9BX93 195 aa13.56□□□□□ -0.24
CAPN3-202ENST00000337571 GBA2Q9HCG7 927 aaPredicted RBP13.56□□□□□ -0.24
CAPN3-202ENST00000337571 MYOZ2Q9NPC6 264 aa13.56□□□□□ -0.24
CAPN3-202ENST00000337571 SCN9AQ15858 1988 aa13.55□□□□□ -0.24
CAPN3-202ENST00000337571 ANKRD18BA2A2Z9 1011 aa13.55□□□□□ -0.24
CAPN3-202ENST00000337571 ADM5C9JUS6 153 aa13.55□□□□□ -0.24
CAPN3-202ENST00000337571 BRPF1P55201 1214 aaPredicted RBP13.55□□□□□ -0.24
CAPN3-202ENST00000337571 NOGQ13253 232 aa13.55□□□□□ -0.24
CAPN3-202ENST00000337571 DLK2Q6UY11 383 aa13.55□□□□□ -0.24
CAPN3-202ENST00000337571 COA1Q9GZY4 146 aa13.55□□□□□ -0.24
CAPN3-202ENST00000337571 GGA3Q9NZ52 723 aa13.55□□□□□ -0.24
CAPN3-202ENST00000337571 MED23Q9ULK4 1368 aa13.55□□□□□ -0.24
CAPN3-202ENST00000337571 CSF1RP07333 972 aa13.54□□□□□ -0.24
CAPN3-202ENST00000337571 ZNF157P51786 506 aaPredicted RBP13.54□□□□□ -0.24
CAPN3-202ENST00000337571 ANGEL2Q5VTE6 544 aaKnown RBP13.54□□□□□ -0.24
CAPN3-202ENST00000337571 RGMBQ6NW40 437 aa13.54□□□□□ -0.24
CAPN3-202ENST00000337571 CHMP3Q9Y3E7 222 aa13.54□□□□□ -0.24
CAPN3-202ENST00000337571 ZNF804BA4D1E1 1349 aa13.54□□□□□ -0.24
CAPN3-202ENST00000337571 MYO3BQ8WXR4 1341 aa13.54□□□□□ -0.24
CAPN3-202ENST00000337571 WTIPA6NIX2 430 aaPredicted RBP13.53□□□□□ -0.24
CAPN3-202ENST00000337571 MMP14P50281 582 aa13.53□□□□□ -0.24
CAPN3-202ENST00000337571 IFIT5Q13325 482 aaKnown RBP13.53□□□□□ -0.24
CAPN3-202ENST00000337571 FAM161AQ3B820 660 aa13.53□□□□□ -0.24
CAPN3-202ENST00000337571 STRIP1Q5VSL9 837 aa13.53□□□□□ -0.24
CAPN3-202ENST00000337571 TTLL5Q6EMB2 1281 aa13.53□□□□□ -0.24
CAPN3-202ENST00000337571 POTEHQ6S545 545 aa13.53□□□□□ -0.24
CAPN3-202ENST00000337571 C9orf78Q9NZ63 289 aaPredicted RBP13.53□□□□□ -0.24
CAPN3-202ENST00000337571 THSD7BQ9C0I4 1608 aa13.53□□□□□ -0.24
CAPN3-202ENST00000337571 PSME4Q14997 1843 aa13.53□□□□□ -0.24
CAPN3-202ENST00000337571 F6X3S4 739 aa13.52□□□□□ -0.25
CAPN3-202ENST00000337571 CASP7P55210 303 aa13.52□□□□□ -0.25
CAPN3-202ENST00000337571 TAF7LQ5H9L4 462 aa13.52□□□□□ -0.25
CAPN3-202ENST00000337571 CDCA5Q96FF9 252 aa13.52□□□□□ -0.25
CAPN3-202ENST00000337571 GMLQ99445 158 aa13.52□□□□□ -0.25
CAPN3-202ENST00000337571 TSKSQ9UJT2 592 aa13.52□□□□□ -0.25
CAPN3-202ENST00000337571 HDAC9Q9UKV0 1011 aa13.52□□□□□ -0.25
CAPN3-202ENST00000337571 ZNF609O15014 1411 aa13.52□□□□□ -0.25
CAPN3-202ENST00000337571 ASTN2O75129 1339 aaPredicted RBP13.51□□□□□ -0.25
CAPN3-202ENST00000337571 PITPNM2Q9BZ72 1349 aa13.51□□□□□ -0.25
CAPN3-202ENST00000337571 CHRNDQ07001 517 aa13.51□□□□□ -0.25
CAPN3-202ENST00000337571 CCDC57Q2TAC2 916 aa13.51□□□□□ -0.25
CAPN3-202ENST00000337571 DACT2Q5SW24 774 aa13.51□□□□□ -0.25
CAPN3-202ENST00000337571 BEND3Q5T5X7 828 aa13.51□□□□□ -0.25
CAPN3-202ENST00000337571 SLC4A10Q6U841 1118 aa13.51□□□□□ -0.25
CAPN3-202ENST00000337571 FKBP1BP68106 108 aa13.5□□□□□ -0.25
CAPN3-202ENST00000337571 TXNRD3Q86VQ6 643 aa13.5□□□□□ -0.25
CAPN3-202ENST00000337571 GRM8O00222 908 aa13.49□□□□□ -0.25
CAPN3-202ENST00000337571 NF2P35240 595 aa13.49□□□□□ -0.25
CAPN3-202ENST00000337571 GTF2IP78347 998 aa13.49□□□□□ -0.25
CAPN3-202ENST00000337571 FOXO4P98177 505 aa13.49□□□□□ -0.25
CAPN3-202ENST00000337571 KIF23Q02241 960 aaPredicted RBP13.49□□□□□ -0.25
CAPN3-202ENST00000337571 TTLL12Q14166 644 aaPredicted RBP13.49□□□□□ -0.25
CAPN3-202ENST00000337571 NBPF9Q3BBW0 867 aa13.49□□□□□ -0.25
CAPN3-202ENST00000337571 LMBR1LQ6UX01 489 aa13.49□□□□□ -0.25
CAPN3-202ENST00000337571 ABHD8Q96I13 439 aa13.49□□□□□ -0.25
CAPN3-202ENST00000337571 MXD3Q9BW11 206 aa13.49□□□□□ -0.25
CAPN3-202ENST00000337571 CNNM1Q9NRU3 951 aa13.49□□□□□ -0.25
CAPN3-202ENST00000337571 FAM155AB1AL88 458 aaPredicted RBP13.48□□□□□ -0.25
CAPN3-202ENST00000337571 PLIN1O60240 522 aa13.48□□□□□ -0.25
CAPN3-202ENST00000337571 TAF5LO75529 589 aa13.48□□□□□ -0.25
CAPN3-202ENST00000337571 ALDH1L1O75891 902 aa13.48□□□□□ -0.25
CAPN3-202ENST00000337571 LDHAL6AQ6ZMR3 332 aa13.48□□□□□ -0.25
CAPN3-202ENST00000337571 ZNF804AQ7Z570 1209 aa13.48□□□□□ -0.25
CAPN3-202ENST00000337571 KIAA0825Q8IV33 1275 aa13.48□□□□□ -0.25
CAPN3-202ENST00000337571 HELBQ8NG08 1087 aaPredicted RBP13.48□□□□□ -0.25
CAPN3-202ENST00000337571 ZIC5Q96T25 663 aa13.48□□□□□ -0.25
CAPN3-202ENST00000337571 SRCIN1Q9C0H9 1055 aa13.48□□□□□ -0.25
CAPN3-202ENST00000337571 CD209Q9NNX6 404 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms