RNA–Protein interactions for RNA: ENST00000337273.9

TNPO1-201, Transcript of transportin 1, humanhuman

TSL 1 (best) BASIC

Gene TNPO1, Length 11,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-201ENST00000337273 CCDC186Q7Z3E2 898 aa9.1□□□□□ -0.95
TNPO1-201ENST00000337273 A0A1B0GUA9 196 aa9.1□□□□□ -0.95
TNPO1-201ENST00000337273 PABPN1LA6NDY0 278 aaKnown RBP9.1□□□□□ -0.95
TNPO1-201ENST00000337273 GNAT2P19087 354 aa9.1□□□□□ -0.95
TNPO1-201ENST00000337273 CALML3P27482 149 aa9.1□□□□□ -0.95
TNPO1-201ENST00000337273 USP48Q86UV5 1035 aa9.1□□□□□ -0.95
TNPO1-201ENST00000337273 POTEDQ86YR6 584 aa9.1□□□□□ -0.95
TNPO1-201ENST00000337273 MTRF1LQ9UGC7 380 aaKnown RBP9.1□□□□□ -0.95
TNPO1-201ENST00000337273 RTL1A6NKG5 1358 aa9.1□□□□□ -0.95
TNPO1-201ENST00000337273 MYO1BO43795 1136 aa9.09□□□□□ -0.95
TNPO1-201ENST00000337273 WDHD1O75717 1129 aaPredicted RBP9.09□□□□□ -0.95
TNPO1-201ENST00000337273 TNNC1P63316 161 aa9.09□□□□□ -0.95
TNPO1-201ENST00000337273 THOC2Q8NI27 1593 aaKnown RBP9.09□□□□□ -0.95
TNPO1-201ENST00000337273 UBA5Q9GZZ9 404 aa9.09□□□□□ -0.95
TNPO1-201ENST00000337273 HAND2P61296 217 aa9.09□□□□□ -0.95
TNPO1-201ENST00000337273 IFT74Q96LB3 600 aa9.09□□□□□ -0.95
TNPO1-201ENST00000337273 RBSNQ9H1K0 784 aa9.09□□□□□ -0.95
TNPO1-201ENST00000337273 HMGB1P1B2RPK0 211 aaPredicted RBP9.09□□□□□ -0.95
TNPO1-201ENST00000337273 SETDB1Q15047 1291 aa9.09□□□□□ -0.95
TNPO1-201ENST00000337273 PTPROQ16827 1216 aa9.09□□□□□ -0.95
TNPO1-201ENST00000337273 ERO1AQ96HE7 468 aa9.09□□□□□ -0.95
TNPO1-201ENST00000337273 CCDC8Q9H0W5 538 aaPredicted RBP9.09□□□□□ -0.95
TNPO1-201ENST00000337273 PRC1O43663 620 aa9.09□□□□□ -0.95
TNPO1-201ENST00000337273 MCMDC2Q4G0Z9 681 aa9.09□□□□□ -0.95
TNPO1-201ENST00000337273 PRDM11Q9NQV5 511 aa9.09□□□□□ -0.95
TNPO1-201ENST00000337273 NEK11Q8NG66 645 aa9.09□□□□□ -0.95
TNPO1-201ENST00000337273 CCDC97Q96F63 343 aaPredicted RBP9.09□□□□□ -0.95
TNPO1-201ENST00000337273 TBCAO75347 108 aaKnown RBP9.09□□□□□ -0.95
TNPO1-201ENST00000337273 SYCP3Q8IZU3 236 aa9.09□□□□□ -0.95
TNPO1-201ENST00000337273 FNBP4Q8N3X1 1017 aaPredicted RBP9.09□□□□□ -0.95
TNPO1-201ENST00000337273 ANKRD44Q8N8A2 993 aa9.09□□□□□ -0.95
TNPO1-201ENST00000337273 NAP1L4Q99733 375 aaKnown RBP9.09□□□□□ -0.95
TNPO1-201ENST00000337273 SAMD15Q9P1V8 674 aa9.09□□□□□ -0.95
TNPO1-201ENST00000337273 GABPB1Q06547 395 aaPredicted RBP9.09□□□□□ -0.95
TNPO1-201ENST00000337273 CEP57Q86XR8 500 aa9.09□□□□□ -0.95
TNPO1-201ENST00000337273 ESR2Q92731 530 aa9.09□□□□□ -0.95
TNPO1-201ENST00000337273 CWC25Q9NXE8 425 aaPredicted RBP9.09□□□□□ -0.95
TNPO1-201ENST00000337273 CEP83Q9Y592 693 aa9.09□□□□□ -0.95
TNPO1-201ENST00000337273 DDX23Q9BUQ8 820 aaKnown RBP9.09□□□□□ -0.96
TNPO1-201ENST00000337273 TRIM7Q9C029 511 aa9.09□□□□□ -0.96
TNPO1-201ENST00000337273 HDAC9Q9UKV0 1011 aa9.09□□□□□ -0.96
TNPO1-201ENST00000337273 ANXA1P04083 346 aa9.08□□□□□ -0.96
TNPO1-201ENST00000337273 TTC19Q6DKK2 380 aaPredicted RBP9.08□□□□□ -0.96
TNPO1-201ENST00000337273 TOPBP1Q92547 1522 aa9.08□□□□□ -0.96
TNPO1-201ENST00000337273 ZBTB43O43298 467 aa9.08□□□□□ -0.96
TNPO1-201ENST00000337273 TSPY2A6NKD2 308 aa9.08□□□□□ -0.96
TNPO1-201ENST00000337273 WTAPQ15007 396 aa9.08□□□□□ -0.96
TNPO1-201ENST00000337273 MICALL1Q8N3F8 863 aa9.08□□□□□ -0.96
TNPO1-201ENST00000337273 CRNKL1Q9BZJ0 848 aaKnown RBP9.08□□□□□ -0.96
TNPO1-201ENST00000337273 FAM76AQ8TAV0 307 aa9.08□□□□□ -0.96
TNPO1-201ENST00000337273 DACT1Q9NYF0 836 aa9.08□□□□□ -0.96
TNPO1-201ENST00000337273 A0A1B0GUL7 405 aa9.08□□□□□ -0.96
TNPO1-201ENST00000337273 RHPN1Q8TCX5 695 aa9.08□□□□□ -0.96
TNPO1-201ENST00000337273 IQCDQ96DY2 449 aa9.08□□□□□ -0.96
TNPO1-201ENST00000337273 HLA-DOAP06340 250 aa9.08□□□□□ -0.96
TNPO1-201ENST00000337273 MAP3K9P80192 1104 aa9.08□□□□□ -0.96
TNPO1-201ENST00000337273 MACROD2A1Z1Q3 448 aa9.08□□□□□ -0.96
TNPO1-201ENST00000337273 OTUD7AQ8TE49 926 aaPredicted RBP9.08□□□□□ -0.96
TNPO1-201ENST00000337273 CCDC42Q96M95 316 aa9.08□□□□□ -0.96
TNPO1-201ENST00000337273 PUF60Q9UHX1 559 aaKnown RBP9.08□□□□□ -0.96
TNPO1-201ENST00000337273 ZPR1O75312 459 aa9.08□□□□□ -0.96
TNPO1-201ENST00000337273 SDSP20132 328 aa9.08□□□□□ -0.96
TNPO1-201ENST00000337273 RRAGBQ5VZM2 374 aa9.08□□□□□ -0.96
TNPO1-201ENST00000337273 VPS18Q9P253 973 aa9.08□□□□□ -0.96
TNPO1-201ENST00000337273 SSX2IPQ9Y2D8 614 aa9.08□□□□□ -0.96
TNPO1-201ENST00000337273 NOL3O60936 208 aaKnown RBP9.08□□□□□ -0.96
TNPO1-201ENST00000337273 PDE1AP54750 535 aa9.08□□□□□ -0.96
TNPO1-201ENST00000337273 ELF2Q15723 593 aa9.08□□□□□ -0.96
TNPO1-201ENST00000337273 ALG1Q9BT22 464 aa9.08□□□□□ -0.96
TNPO1-201ENST00000337273 ABCC5O15440 1437 aa9.07□□□□□ -0.96
TNPO1-201ENST00000337273 IDEP14735 1019 aa9.07□□□□□ -0.96
TNPO1-201ENST00000337273 MSANTD4Q8NCY6 345 aa9.07□□□□□ -0.96
TNPO1-201ENST00000337273 PPFIBP2Q8ND30 876 aa9.07□□□□□ -0.96
TNPO1-201ENST00000337273 CCDC26Q8TAB7 109 aa9.07□□□□□ -0.96
TNPO1-201ENST00000337273 ATRIPQ8WXE1 791 aa9.07□□□□□ -0.96
TNPO1-201ENST00000337273 KRT13P13646 458 aa9.07□□□□□ -0.96
TNPO1-201ENST00000337273 PPP1R42Q7Z4L9 355 aa9.07□□□□□ -0.96
TNPO1-201ENST00000337273 MTUS1Q9ULD2 1270 aa9.07□□□□□ -0.96
TNPO1-201ENST00000337273 ALDH1L1O75891 902 aa9.07□□□□□ -0.96
TNPO1-201ENST00000337273 CHMP4BP1P59074 171 aa9.07□□□□□ -0.96
TNPO1-201ENST00000337273 SLC26A6Q9BXS9 759 aa9.07□□□□□ -0.96
TNPO1-201ENST00000337273 CPLX4Q7Z7G2 160 aa9.07□□□□□ -0.96
TNPO1-201ENST00000337273 TTF2Q9UNY4 1162 aaKnown RBP9.07□□□□□ -0.96
TNPO1-201ENST00000337273 SPTLC2O15270 562 aa9.07□□□□□ -0.96
TNPO1-201ENST00000337273 ERCC3P19447 782 aa9.07□□□□□ -0.96
TNPO1-201ENST00000337273 COBLO75128 1261 aa9.07□□□□□ -0.96
TNPO1-201ENST00000337273 SF3B2Q13435 895 aaKnown RBP9.07□□□□□ -0.96
TNPO1-201ENST00000337273 CCDC14Q49A88 953 aa9.07□□□□□ -0.96
TNPO1-201ENST00000337273 LDHAL6AQ6ZMR3 332 aa9.07□□□□□ -0.96
TNPO1-201ENST00000337273 ZMYM3Q14202 1370 aa9.07□□□□□ -0.96
TNPO1-201ENST00000337273 NUTM2AQ8IVF1 878 aaPredicted RBP9.07□□□□□ -0.96
TNPO1-201ENST00000337273 CSRNP2Q9H175 543 aa9.07□□□□□ -0.96
TNPO1-201ENST00000337273 RTL9Q8NET4 1388 aa9.07□□□□□ -0.96
TNPO1-201ENST00000337273 ARHGAP25P42331 645 aa9.07□□□□□ -0.96
TNPO1-201ENST00000337273 SEPT6Q14141 434 aa9.07□□□□□ -0.96
TNPO1-201ENST00000337273 TYRO3Q06418 890 aa9.06□□□□□ -0.96
TNPO1-201ENST00000337273 VWA3BQ502W6 1294 aa9.06□□□□□ -0.96
TNPO1-201ENST00000337273 IFIT1BQ5T764 474 aaKnown RBP9.06□□□□□ -0.96
TNPO1-201ENST00000337273 WDR66Q8TBY9 1149 aa9.06□□□□□ -0.96
TNPO1-201ENST00000337273 TRMT112Q9UI30 125 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms