RNA–Protein interactions for RNA: ENST00000335497.11

RNF220-201, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 1,203 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-201ENST00000335497 LINS1Q8NG48 757 aa33.19■■■□□ 2.9
RNF220-201ENST00000335497 WTIPA6NIX2 430 aaPredicted RBP33.18■■■□□ 2.9
RNF220-201ENST00000335497 USP17L8P0C7I0 530 aa33.18■■■□□ 2.9
RNF220-201ENST00000335497 SALL2Q9Y467 1007 aaPredicted RBP33.18■■■□□ 2.9
RNF220-201ENST00000335497 LEMD3Q9Y2U8 911 aa33.17■■■□□ 2.9
RNF220-201ENST00000335497 CSF1RP07333 972 aa33.16■■■□□ 2.9
RNF220-201ENST00000335497 EXOSC9Q06265 439 aaKnown RBP33.16■■■□□ 2.9
RNF220-201ENST00000335497 SCARF1Q14162 830 aa33.16■■■□□ 2.9
RNF220-201ENST00000335497 ASTN2O75129 1339 aaPredicted RBP33.16■■■□□ 2.9
RNF220-201ENST00000335497 ITGA6P23229 1130 aa33.15■■■□□ 2.9
RNF220-201ENST00000335497 RGMBQ6NW40 437 aa33.15■■■□□ 2.9
RNF220-201ENST00000335497 MYOZ2Q9NPC6 264 aa33.15■■■□□ 2.9
RNF220-201ENST00000335497 ANGEL2Q5VTE6 544 aaKnown RBP33.14■■■□□ 2.9
RNF220-201ENST00000335497 ANKRD2Q9GZV1 360 aa33.14■■■□□ 2.9
RNF220-201ENST00000335497 COA1Q9GZY4 146 aa33.14■■■□□ 2.9
RNF220-201ENST00000335497 FAM161AQ3B820 660 aa33.13■■■□□ 2.89
RNF220-201ENST00000335497 CCDC102AQ96A19 550 aa33.13■■■□□ 2.89
RNF220-201ENST00000335497 MPHOSPH8Q99549 860 aa33.13■■■□□ 2.89
RNF220-201ENST00000335497 TSKSQ9UJT2 592 aa33.13■■■□□ 2.89
RNF220-201ENST00000335497 PITPNM2Q9BZ72 1349 aa33.12■■■□□ 2.89
RNF220-201ENST00000335497 FAM155AB1AL88 458 aaPredicted RBP33.12■■■□□ 2.89
RNF220-201ENST00000335497 CDCA5Q96FF9 252 aa33.12■■■□□ 2.89
RNF220-201ENST00000335497 DACT2Q5SW24 774 aa33.11■■■□□ 2.89
RNF220-201ENST00000335497 STRIP1Q5VSL9 837 aa33.11■■■□□ 2.89
RNF220-201ENST00000335497 ABHD8Q96I13 439 aa33.11■■■□□ 2.89
RNF220-201ENST00000335497 ZIC5Q96T25 663 aa33.11■■■□□ 2.89
RNF220-201ENST00000335497 ZNF804BA4D1E1 1349 aa33.1■■■□□ 2.89
RNF220-201ENST00000335497 MYO3BQ8WXR4 1341 aa33.1■■■□□ 2.89
RNF220-201ENST00000335497 TXNRD3Q86VQ6 643 aa33.09■■■□□ 2.89
RNF220-201ENST00000335497 MMP14P50281 582 aa33.08■■■□□ 2.89
RNF220-201ENST00000335497 ZNF157P51786 506 aaPredicted RBP33.08■■■□□ 2.89
RNF220-201ENST00000335497 SPINK5Q9NQ38 1064 aaPredicted RBP33.08■■■□□ 2.89
RNF220-201ENST00000335497 ZNF646O15015 1829 aaPredicted RBP33.07■■■□□ 2.89
RNF220-201ENST00000335497 ANKRD18BA2A2Z9 1011 aa33.07■■■□□ 2.88
RNF220-201ENST00000335497 OGFOD1Q8N543 542 aa33.07■■■□□ 2.88
RNF220-201ENST00000335497 FKBP1BP68106 108 aa33.06■■■□□ 2.88
RNF220-201ENST00000335497 BEND3Q5T5X7 828 aa33.06■■■□□ 2.88
RNF220-201ENST00000335497 F6X3S4 739 aa33.05■■■□□ 2.88
RNF220-201ENST00000335497 CHRNDQ07001 517 aa33.05■■■□□ 2.88
RNF220-201ENST00000335497 MXD3Q9BW11 206 aa33.05■■■□□ 2.88
RNF220-201ENST00000335497 FOXO4P98177 505 aa33.04■■■□□ 2.88
RNF220-201ENST00000335497 FBXW7Q969H0 707 aa33.04■■■□□ 2.88
RNF220-201ENST00000335497 SLC10A3P09131 477 aa33.03■■■□□ 2.88
RNF220-201ENST00000335497 KCNJ4P48050 445 aa33.03■■■□□ 2.88
RNF220-201ENST00000335497 KIF23Q02241 960 aaPredicted RBP33.03■■■□□ 2.88
RNF220-201ENST00000335497 NBPF9Q3BBW0 867 aa33.03■■■□□ 2.88
RNF220-201ENST00000335497 TTLL5Q6EMB2 1281 aa33.03■■■□□ 2.88
RNF220-201ENST00000335497 KLRK1P26718 216 aa33.02■■■□□ 2.88
RNF220-201ENST00000335497 IFIT5Q13325 482 aaKnown RBP33.02■■■□□ 2.88
RNF220-201ENST00000335497 FAM9BQ8IZU0 186 aa33.01■■■□□ 2.87
RNF220-201ENST00000335497 SAGE1Q9NXZ1 904 aa33.01■■■□□ 2.87
RNF220-201ENST00000335497 PAPPA2Q9BXP8 1791 aa33.01■■■□□ 2.87
RNF220-201ENST00000335497 WNT10BO00744 389 aa33■■■□□ 2.87
RNF220-201ENST00000335497 CASP8AP2Q9UKL3 1982 aa33■■■□□ 2.87
RNF220-201ENST00000335497 C15orf52Q6ZUT6 534 aaKnown RBP32.99■■■□□ 2.87
RNF220-201ENST00000335497 CD209Q9NNX6 404 aa32.99■■■□□ 2.87
RNF220-201ENST00000335497 GRM8O00222 908 aa32.98■■■□□ 2.87
RNF220-201ENST00000335497 CHMP3Q9Y3E7 222 aa32.98■■■□□ 2.87
RNF220-201ENST00000335497 GTF2IP78347 998 aa32.97■■■□□ 2.87
RNF220-201ENST00000335497 REM2Q8IYK8 340 aaPredicted RBP32.97■■■□□ 2.87
RNF220-201ENST00000335497 HDAC9Q9UKV0 1011 aa32.97■■■□□ 2.87
RNF220-201ENST00000335497 IRS2Q9Y4H2 1338 aa32.97■■■□□ 2.87
RNF220-201ENST00000335497 LMBR1LQ6UX01 489 aa32.96■■■□□ 2.87
RNF220-201ENST00000335497 RASAL3Q86YV0 1011 aa32.96■■■□□ 2.87
RNF220-201ENST00000335497 SCAF8Q9UPN6 1271 aaKnown RBP32.96■■■□□ 2.87
RNF220-201ENST00000335497 TAF5LO75529 589 aa32.95■■■□□ 2.87
RNF220-201ENST00000335497 ALDH1L1O75891 902 aa32.95■■■□□ 2.87
RNF220-201ENST00000335497 KIAA0825Q8IV33 1275 aa32.95■■■□□ 2.87
RNF220-201ENST00000335497 CSRNP1Q96S65 589 aa32.95■■■□□ 2.87
RNF220-201ENST00000335497 CCDC57Q2TAC2 916 aa32.94■■■□□ 2.86
RNF220-201ENST00000335497 EPHA10Q5JZY3 1008 aa32.94■■■□□ 2.86
RNF220-201ENST00000335497 HELBQ8NG08 1087 aaPredicted RBP32.94■■■□□ 2.86
RNF220-201ENST00000335497 RNF186Q9NXI6 227 aa32.94■■■□□ 2.86
RNF220-201ENST00000335497 C9orf78Q9NZ63 289 aaPredicted RBP32.94■■■□□ 2.86
RNF220-201ENST00000335497 AKAP11Q9UKA4 1901 aa32.93■■■□□ 2.86
RNF220-201ENST00000335497 SNAP23O00161 211 aa32.93■■■□□ 2.86
RNF220-201ENST00000335497 ZBED3Q96IU2 234 aaPredicted RBP32.93■■■□□ 2.86
RNF220-201ENST00000335497 MCOLN1Q9GZU1 580 aa32.93■■■□□ 2.86
RNF220-201ENST00000335497 A0A1B0GUL6 1792 aa32.93■■■□□ 2.86
RNF220-201ENST00000335497 SASH1O94885 1247 aa32.92■■■□□ 2.86
RNF220-201ENST00000335497 PRAMEF18Q5VWM3 479 aa32.92■■■□□ 2.86
RNF220-201ENST00000335497 CCDC85CA6NKD9 419 aa32.91■■■□□ 2.86
RNF220-201ENST00000335497 NF2P35240 595 aa32.91■■■□□ 2.86
RNF220-201ENST00000335497 LDHAL6AQ6ZMR3 332 aa32.91■■■□□ 2.86
RNF220-201ENST00000335497 ZNF804AQ7Z570 1209 aa32.91■■■□□ 2.86
RNF220-201ENST00000335497 APOBEC3FQ8IUX4 373 aaKnown RBP32.91■■■□□ 2.86
RNF220-201ENST00000335497 ZNF521Q96K83 1311 aa32.91■■■□□ 2.86
RNF220-201ENST00000335497 TRPA1O75762 1119 aa32.9■■■□□ 2.86
RNF220-201ENST00000335497 IL1R1P14778 569 aa32.9■■■□□ 2.86
RNF220-201ENST00000335497 DGKZQ13574 1117 aa32.9■■■□□ 2.86
RNF220-201ENST00000335497 TAF7LQ5H9L4 462 aa32.9■■■□□ 2.86
RNF220-201ENST00000335497 SLC4A10Q6U841 1118 aa32.9■■■□□ 2.86
RNF220-201ENST00000335497 MOB2Q70IA6 237 aa32.9■■■□□ 2.86
RNF220-201ENST00000335497 SRCIN1Q9C0H9 1055 aa32.9■■■□□ 2.86
RNF220-201ENST00000335497 UBE2Q2LH0YL09 131 aa32.89■■■□□ 2.86
RNF220-201ENST00000335497 ZNF594Q96JF6 807 aaPredicted RBP32.89■■■□□ 2.86
RNF220-201ENST00000335497 CNNM1Q9NRU3 951 aa32.88■■■□□ 2.85
RNF220-201ENST00000335497 FKBP1AP62942 108 aaKnown RBP32.87■■■□□ 2.85
RNF220-201ENST00000335497 TTLL12Q14166 644 aaPredicted RBP32.87■■■□□ 2.85
RNF220-201ENST00000335497 CERS5Q8N5B7 392 aa32.87■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms