RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 TPM2P07951 284 aa20.88■□□□□ 0.93
LRCH3-201ENST00000334859 GPTP24298 496 aa20.88■□□□□ 0.93
LRCH3-201ENST00000334859 TRIM28Q13263 835 aaKnown RBP20.88■□□□□ 0.93
LRCH3-201ENST00000334859 CHST3Q7LGC8 479 aa20.88■□□□□ 0.93
LRCH3-201ENST00000334859 ZBTB38Q8NAP3 1195 aaPredicted RBP20.88■□□□□ 0.93
LRCH3-201ENST00000334859 EXOSC10Q01780 885 aaKnown RBP20.87■□□□□ 0.93
LRCH3-201ENST00000334859 KIAA2012Q0VF49 1180 aa20.87■□□□□ 0.93
LRCH3-201ENST00000334859 CKAP2LQ8IYA6 745 aa20.87■□□□□ 0.93
LRCH3-201ENST00000334859 ZSCAN16Q9H4T2 348 aaPredicted RBP20.87■□□□□ 0.93
LRCH3-201ENST00000334859 NCOA5Q9HCD5 579 aaKnown RBP20.87■□□□□ 0.93
LRCH3-201ENST00000334859 R3HCC1Q9Y3T6 440 aaKnown RBP20.87■□□□□ 0.93
LRCH3-201ENST00000334859 STRCQ7RTU9 1775 aa20.87■□□□□ 0.93
LRCH3-201ENST00000334859 VSIG10Q8N0Z9 540 aa20.87■□□□□ 0.93
LRCH3-201ENST00000334859 DDX19AQ9NUU7 478 aaKnown RBP20.87■□□□□ 0.93
LRCH3-201ENST00000334859 FBXO3Q9UK99 471 aa20.87■□□□□ 0.93
LRCH3-201ENST00000334859 KIF3AQ9Y496 699 aa20.87■□□□□ 0.93
LRCH3-201ENST00000334859 MAP3K15Q6ZN16 1313 aa20.86■□□□□ 0.93
LRCH3-201ENST00000334859 SCARF1Q14162 830 aa20.86■□□□□ 0.93
LRCH3-201ENST00000334859 HSP90AB3PQ58FF7 597 aa20.86■□□□□ 0.93
LRCH3-201ENST00000334859 SYNE4Q8N205 404 aa20.86■□□□□ 0.93
LRCH3-201ENST00000334859 BTG4Q9NY30 223 aa20.86■□□□□ 0.93
LRCH3-201ENST00000334859 PPFIA3O75145 1194 aa20.85■□□□□ 0.93
LRCH3-201ENST00000334859 HMGN5P82970 282 aaKnown RBP20.85■□□□□ 0.93
LRCH3-201ENST00000334859 TYRO3Q06418 890 aa20.85■□□□□ 0.93
LRCH3-201ENST00000334859 CTDNEP1O95476 244 aa20.85■□□□□ 0.93
LRCH3-201ENST00000334859 HAND2P61296 217 aa20.85■□□□□ 0.93
LRCH3-201ENST00000334859 CEBPZQ03701 1054 aaKnown RBP20.85■□□□□ 0.93
LRCH3-201ENST00000334859 METTL24Q5JXM2 366 aa20.85■□□□□ 0.93
LRCH3-201ENST00000334859 ZNF830Q96NB3 372 aaPredicted RBP20.85■□□□□ 0.93
LRCH3-201ENST00000334859 PLA2G12BQ9BX93 195 aa20.85■□□□□ 0.93
LRCH3-201ENST00000334859 AGXT2Q9BYV1 514 aa20.85■□□□□ 0.93
LRCH3-201ENST00000334859 KAT6BQ8WYB5 2073 aa20.85■□□□□ 0.93
LRCH3-201ENST00000334859 RIC1Q4ADV7 1423 aa20.85■□□□□ 0.93
LRCH3-201ENST00000334859 ZFYP08048 801 aaPredicted RBP20.84■□□□□ 0.93
LRCH3-201ENST00000334859 ZAP70P43403 619 aa20.84■□□□□ 0.93
LRCH3-201ENST00000334859 PI16Q6UXB8 463 aa20.84■□□□□ 0.93
LRCH3-201ENST00000334859 PGBD1Q96JS3 809 aa20.84■□□□□ 0.93
LRCH3-201ENST00000334859 CFAP45Q9UL16 551 aa20.84■□□□□ 0.93
LRCH3-201ENST00000334859 CSF1RP07333 972 aa20.84■□□□□ 0.93
LRCH3-201ENST00000334859 HLFQ16534 295 aa20.84■□□□□ 0.93
LRCH3-201ENST00000334859 ATP2B3Q16720 1220 aa20.84■□□□□ 0.93
LRCH3-201ENST00000334859 NAA16Q6N069 864 aaPredicted RBP20.84■□□□□ 0.93
LRCH3-201ENST00000334859 GIGYF2Q6Y7W6 1299 aaKnown RBP20.84■□□□□ 0.93
LRCH3-201ENST00000334859 FAM200AQ8TCP9 573 aa20.84■□□□□ 0.93
LRCH3-201ENST00000334859 CTNNA3Q9UI47 895 aa20.84■□□□□ 0.93
LRCH3-201ENST00000334859 NR1I2O75469 434 aa20.83■□□□□ 0.93
LRCH3-201ENST00000334859 CLSTN2Q9H4D0 955 aa20.83■□□□□ 0.93
LRCH3-201ENST00000334859 MRVI1Q9Y6F6 885 aa20.83■□□□□ 0.93
LRCH3-201ENST00000334859 ITGB4P16144 1822 aa20.83■□□□□ 0.92
LRCH3-201ENST00000334859 ITGA6P23229 1130 aa20.83■□□□□ 0.92
LRCH3-201ENST00000334859 PDIA3P30101 505 aaKnown RBP20.83■□□□□ 0.92
LRCH3-201ENST00000334859 IMMTQ16891 758 aaKnown RBP20.83■□□□□ 0.92
LRCH3-201ENST00000334859 LDHAL6AQ6ZMR3 332 aa20.83■□□□□ 0.92
LRCH3-201ENST00000334859 GREM2Q9H772 168 aa20.83■□□□□ 0.92
LRCH3-201ENST00000334859 TTC12Q9H892 705 aaPredicted RBP20.83■□□□□ 0.92
LRCH3-201ENST00000334859 NHSL1Q5SYE7 1610 aa20.82■□□□□ 0.92
LRCH3-201ENST00000334859 NLRP10Q86W26 655 aa20.82■□□□□ 0.92
LRCH3-201ENST00000334859 AP5Z1O43299 807 aa20.81■□□□□ 0.92
LRCH3-201ENST00000334859 APPBP2Q92624 585 aa20.81■□□□□ 0.92
LRCH3-201ENST00000334859 SYTL4Q96C24 671 aaPredicted RBP20.81■□□□□ 0.92
LRCH3-201ENST00000334859 ZNF274Q96GC6 653 aaPredicted RBP20.81■□□□□ 0.92
LRCH3-201ENST00000334859 CNNM1Q9NRU3 951 aa20.81■□□□□ 0.92
LRCH3-201ENST00000334859 ANO6Q4KMQ2 910 aa20.81■□□□□ 0.92
LRCH3-201ENST00000334859 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.81■□□□□ 0.92
LRCH3-201ENST00000334859 CDHR2Q9BYE9 1310 aa20.81■□□□□ 0.92
LRCH3-201ENST00000334859 FOXP2O15409 715 aa20.8■□□□□ 0.92
LRCH3-201ENST00000334859 CTSWP56202 376 aa20.8■□□□□ 0.92
LRCH3-201ENST00000334859 GUCY1B3Q02153 619 aa20.8■□□□□ 0.92
LRCH3-201ENST00000334859 FTOQ9C0B1 505 aaKnown RBP eCLIP20.8■□□□□ 0.92
LRCH3-201ENST00000334859 PUS7LQ9H0K6 701 aaKnown RBP20.8■□□□□ 0.92
LRCH3-201ENST00000334859 GPHNQ9NQX3 736 aaPredicted RBP20.8■□□□□ 0.92
LRCH3-201ENST00000334859 NWD2Q9ULI1 1742 aa20.8■□□□□ 0.92
LRCH3-201ENST00000334859 SALL1Q9NSC2 1324 aa20.8■□□□□ 0.92
LRCH3-201ENST00000334859 MYH15Q9Y2K3 1946 aa20.8■□□□□ 0.92
LRCH3-201ENST00000334859 FGAP02671 866 aa20.8■□□□□ 0.92
LRCH3-201ENST00000334859 LUZP1Q86V48 1076 aa20.8■□□□□ 0.92
LRCH3-201ENST00000334859 TTLL11Q8NHH1 800 aa20.8■□□□□ 0.92
LRCH3-201ENST00000334859 ABCC12Q96J65 1359 aa20.8■□□□□ 0.92
LRCH3-201ENST00000334859 CARMIL3Q8ND23 1372 aa20.79■□□□□ 0.92
LRCH3-201ENST00000334859 ANKRD18BA2A2Z9 1011 aa20.79■□□□□ 0.92
LRCH3-201ENST00000334859 TRMT112Q9UI30 125 aaKnown RBP20.79■□□□□ 0.92
LRCH3-201ENST00000334859 RIPOR2Q9Y4F9 1068 aa20.79■□□□□ 0.92
LRCH3-201ENST00000334859 MYH7P12883 1935 aa20.79■□□□□ 0.92
LRCH3-201ENST00000334859 SASS6Q6UVJ0 657 aa20.79■□□□□ 0.92
LRCH3-201ENST00000334859 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.79■□□□□ 0.926e-7■■■□□ 15
LRCH3-201ENST00000334859 ZBTB1Q9Y2K1 713 aa20.79■□□□□ 0.92
LRCH3-201ENST00000334859 LRP6O75581 1613 aa20.79■□□□□ 0.92
LRCH3-201ENST00000334859 IRS4O14654 1257 aaPredicted RBP20.78■□□□□ 0.92
LRCH3-201ENST00000334859 GPAA1O43292 621 aa20.78■□□□□ 0.92
LRCH3-201ENST00000334859 CYP19A1P11511 503 aaPredicted RBP20.78■□□□□ 0.92
LRCH3-201ENST00000334859 MCAMP43121 646 aa20.78■□□□□ 0.92
LRCH3-201ENST00000334859 TERF1P54274 439 aa20.78■□□□□ 0.92
LRCH3-201ENST00000334859 SPC24Q8NBT2 197 aa20.78■□□□□ 0.92
LRCH3-201ENST00000334859 CHMP4CQ96CF2 233 aa20.78■□□□□ 0.92
LRCH3-201ENST00000334859 BCL9O00512 1426 aa20.78■□□□□ 0.92
LRCH3-201ENST00000334859 PRC1O43663 620 aa20.78■□□□□ 0.92
LRCH3-201ENST00000334859 ADD1P35611 737 aaKnown RBP20.78■□□□□ 0.92
LRCH3-201ENST00000334859 RBM43Q6ZSC3 357 aaKnown RBP20.78■□□□□ 0.92
LRCH3-201ENST00000334859 RALYLQ86SE5 291 aaKnown RBP20.78■□□□□ 0.92
LRCH3-201ENST00000334859 SLC4A9Q96Q91 983 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms