RNA–Protein interactions for RNA: ENST00000334464.6

PDZD8-201, Transcript of PDZ domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD8, Length 9,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-201ENST00000334464 SSFA2P28290 1259 aa18.82■□□□□ 0.6
PDZD8-201ENST00000334464 ZBTB16Q05516 673 aa18.82■□□□□ 0.6
PDZD8-201ENST00000334464 TRIM75PA6NK02 468 aa18.82■□□□□ 0.6
PDZD8-201ENST00000334464 A6NNZ2 444 aa18.82■□□□□ 0.6
PDZD8-201ENST00000334464 MAP3K9P80192 1104 aa18.82■□□□□ 0.6
PDZD8-201ENST00000334464 TUBB8Q3ZCM7 444 aa18.82■□□□□ 0.6
PDZD8-201ENST00000334464 GSTA5Q7RTV2 222 aa18.82■□□□□ 0.6
PDZD8-201ENST00000334464 RRP36Q96EU6 259 aaKnown RBP18.82■□□□□ 0.6
PDZD8-201ENST00000334464 NDC80O14777 642 aa18.82■□□□□ 0.6
PDZD8-201ENST00000334464 RPL13P26373 211 aaKnown RBP18.82■□□□□ 0.6
PDZD8-201ENST00000334464 ARFGAP2Q8N6H7 521 aa18.82■□□□□ 0.6
PDZD8-201ENST00000334464 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.82■□□□□ 0.6
PDZD8-201ENST00000334464 CNGA1P29973 690 aa18.82■□□□□ 0.6
PDZD8-201ENST00000334464 RTL1A6NKG5 1358 aa18.81■□□□□ 0.6
PDZD8-201ENST00000334464 MYCNP04198 464 aaPredicted RBP18.81■□□□□ 0.6
PDZD8-201ENST00000334464 SETDB2Q96T68 719 aa18.81■□□□□ 0.6
PDZD8-201ENST00000334464 AK9Q5TCS8 1911 aa18.81■□□□□ 0.6
PDZD8-201ENST00000334464 OTUD6BQ8N6M0 293 aa18.81■□□□□ 0.6
PDZD8-201ENST00000334464 ALG1Q9BT22 464 aa18.81■□□□□ 0.6
PDZD8-201ENST00000334464 THUMPD2Q9BTF0 503 aaKnown RBP18.81■□□□□ 0.6
PDZD8-201ENST00000334464 ZMYND15Q9H091 742 aa18.81■□□□□ 0.6
PDZD8-201ENST00000334464 RBM28Q9NW13 759 aaKnown RBP18.81■□□□□ 0.6
PDZD8-201ENST00000334464 ARL1P40616 181 aaPredicted RBP18.81■□□□□ 0.6
PDZD8-201ENST00000334464 NAPAP54920 295 aa18.81■□□□□ 0.6
PDZD8-201ENST00000334464 NEK11Q8NG66 645 aa18.81■□□□□ 0.6
PDZD8-201ENST00000334464 SH2D4AQ9H788 454 aa18.81■□□□□ 0.6
PDZD8-201ENST00000334464 MNAT1P51948 309 aa18.81■□□□□ 0.6
PDZD8-201ENST00000334464 STIM2Q9P246 746 aa18.81■□□□□ 0.6
PDZD8-201ENST00000334464 NOS1P29475 1434 aa18.81■□□□□ 0.6
PDZD8-201ENST00000334464 SMARCC2Q8TAQ2 1214 aa18.81■□□□□ 0.6
PDZD8-201ENST00000334464 CNGA4Q8IV77 575 aa18.8■□□□□ 0.6
PDZD8-201ENST00000334464 HEATR3Q7Z4Q2 680 aa18.8■□□□□ 0.6
PDZD8-201ENST00000334464 GPR161Q8N6U8 529 aaKnown RBP18.8■□□□□ 0.6
PDZD8-201ENST00000334464 FAM184BQ9ULE4 1060 aa18.8■□□□□ 0.6
PDZD8-201ENST00000334464 KLF18A0A0U1RQI7 1052 aa18.8■□□□□ 0.6
PDZD8-201ENST00000334464 FAM13AO94988 1023 aa18.8■□□□□ 0.6
PDZD8-201ENST00000334464 MTUS1Q9ULD2 1270 aa18.8■□□□□ 0.6
PDZD8-201ENST00000334464 VAV2P52735 878 aa18.8■□□□□ 0.6
PDZD8-201ENST00000334464 DHX37Q8IY37 1157 aaKnown RBP18.8■□□□□ 0.6
PDZD8-201ENST00000334464 PLB1Q6P1J6 1458 aa18.8■□□□□ 0.6
PDZD8-201ENST00000334464 ATP2B3Q16720 1220 aa18.8■□□□□ 0.6
PDZD8-201ENST00000334464 ZSCAN23Q3MJ62 389 aa18.8■□□□□ 0.6
PDZD8-201ENST00000334464 AMOTL2Q9Y2J4 779 aa18.8■□□□□ 0.6
PDZD8-201ENST00000334464 ERCC6LQ2NKX8 1250 aa18.79■□□□□ 0.6
PDZD8-201ENST00000334464 NME9Q86XW9 330 aa18.79■□□□□ 0.6
PDZD8-201ENST00000334464 KIFAP3Q92845 792 aa18.79■□□□□ 0.6
PDZD8-201ENST00000334464 KRT2P35908 639 aa18.79■□□□□ 0.6
PDZD8-201ENST00000334464 MRVI1Q9Y6F6 885 aa18.79■□□□□ 0.6
PDZD8-201ENST00000334464 SKILP12757 684 aa18.79■□□□□ 0.6
PDZD8-201ENST00000334464 GTF2F1P35269 517 aaKnown RBP eCLIP18.79■□□□□ 0.62e-10■■■■■ 42.2
PDZD8-201ENST00000334464 CCDC121Q6ZUS5 278 aa18.79■□□□□ 0.6
PDZD8-201ENST00000334464 TNNC1P63316 161 aa18.79■□□□□ 0.6
PDZD8-201ENST00000334464 NAA16Q6N069 864 aaPredicted RBP18.79■□□□□ 0.6
PDZD8-201ENST00000334464 SMC1BQ8NDV3 1235 aa18.79■□□□□ 0.6
PDZD8-201ENST00000334464 VAT1LQ9HCJ6 419 aa18.79■□□□□ 0.6
PDZD8-201ENST00000334464 FRMD4BQ9Y2L6 1034 aa18.79■□□□□ 0.6
PDZD8-201ENST00000334464 F6X3S4 739 aa18.78■□□□□ 0.6
PDZD8-201ENST00000334464 SLC8A3P57103 927 aa18.78■□□□□ 0.6
PDZD8-201ENST00000334464 VWA3BQ502W6 1294 aa18.78■□□□□ 0.6
PDZD8-201ENST00000334464 CBX1P83916 185 aa18.78■□□□□ 0.6
PDZD8-201ENST00000334464 TUBB2AQ13885 445 aa18.78■□□□□ 0.6
PDZD8-201ENST00000334464 CCDC42Q96M95 316 aa18.78■□□□□ 0.6
PDZD8-201ENST00000334464 TUBB2BQ9BVA1 445 aa18.78■□□□□ 0.6
PDZD8-201ENST00000334464 PI4KAP2A4QPH2 592 aa18.78■□□□□ 0.6
PDZD8-201ENST00000334464 PI4KAP1Q8N8J0 262 aa18.78■□□□□ 0.6
PDZD8-201ENST00000334464 CCDC144CPQ8IYA2 1237 aa18.78■□□□□ 0.6
PDZD8-201ENST00000334464 PSMD1Q99460 953 aa18.78■□□□□ 0.6
PDZD8-201ENST00000334464 GRM8O00222 908 aa18.78■□□□□ 0.6
PDZD8-201ENST00000334464 GPTP24298 496 aa18.78■□□□□ 0.6
PDZD8-201ENST00000334464 ATP6V0A2Q9Y487 856 aa18.78■□□□□ 0.6
PDZD8-201ENST00000334464 SYT1P21579 422 aa18.78■□□□□ 0.6
PDZD8-201ENST00000334464 ZBTB3Q9H5J0 574 aa18.78■□□□□ 0.6
PDZD8-201ENST00000334464 ZNF354CQ86Y25 554 aa18.77■□□□□ 0.6
PDZD8-201ENST00000334464 MAK16Q9BXY0 300 aaKnown RBP18.77■□□□□ 0.6
PDZD8-201ENST00000334464 TRIM14Q14142 442 aa18.77■□□□□ 0.6
PDZD8-201ENST00000334464 SETDB1Q15047 1291 aa18.77■□□□□ 0.6
PDZD8-201ENST00000334464 KRT79Q5XKE5 535 aa18.77■□□□□ 0.6
PDZD8-201ENST00000334464 GPATCH11Q8N954 259 aa18.77■□□□□ 0.6
PDZD8-201ENST00000334464 WAPLQ7Z5K2 1190 aa18.77■□□□□ 0.6
PDZD8-201ENST00000334464 ANKRD2Q9GZV1 360 aa18.77■□□□□ 0.6
PDZD8-201ENST00000334464 TRIM7Q9C029 511 aa18.77■□□□□ 0.59
PDZD8-201ENST00000334464 RAD50Q92878 1312 aa18.77■□□□□ 0.59
PDZD8-201ENST00000334464 NLRP3Q96P20 1036 aa18.77■□□□□ 0.59
PDZD8-201ENST00000334464 ANO6Q4KMQ2 910 aa18.76■□□□□ 0.59
PDZD8-201ENST00000334464 MBIPQ9NS73 344 aa18.76■□□□□ 0.59
PDZD8-201ENST00000334464 TRPM2O94759 1503 aa18.76■□□□□ 0.59
PDZD8-201ENST00000334464 EEF2P13639 858 aaKnown RBP18.76■□□□□ 0.59
PDZD8-201ENST00000334464 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.76■□□□□ 0.59
PDZD8-201ENST00000334464 ZHX1Q9UKY1 873 aaPredicted RBP18.76■□□□□ 0.59
PDZD8-201ENST00000334464 CYP7A1P22680 504 aa18.76■□□□□ 0.59
PDZD8-201ENST00000334464 SEPT6Q14141 434 aa18.76■□□□□ 0.59
PDZD8-201ENST00000334464 NPHP3Q7Z494 1330 aa18.76■□□□□ 0.59
PDZD8-201ENST00000334464 CFAP157Q5JU67 520 aa18.76■□□□□ 0.59
PDZD8-201ENST00000334464 CFAP58Q5T655 872 aa18.76■□□□□ 0.59
PDZD8-201ENST00000334464 CCDC50Q8IVM0 306 aa18.76■□□□□ 0.59
PDZD8-201ENST00000334464 SAMD15Q9P1V8 674 aa18.76■□□□□ 0.59
PDZD8-201ENST00000334464 AFAP1L2Q8N4X5 818 aa18.76■□□□□ 0.59
PDZD8-201ENST00000334464 SLC4A4Q9Y6R1 1079 aa18.76■□□□□ 0.59
PDZD8-201ENST00000334464 HAND2P61296 217 aa18.76■□□□□ 0.59
PDZD8-201ENST00000334464 URB2Q14146 1524 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms