RNA–Protein interactions for RNA: ENST00000334271.7

AP1S3-201, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 2

Gene AP1S3, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-201ENST00000334271 TRIM44Q96DX7 344 aaPredicted RBP12.63□□□□□ -0.39
AP1S3-201ENST00000334271 SETDB2Q96T68 719 aa12.63□□□□□ -0.39
AP1S3-201ENST00000334271 IL1RAPL2Q9NP60 686 aa12.63□□□□□ -0.39
AP1S3-201ENST00000334271 ZNF609O15014 1411 aa12.63□□□□□ -0.39
AP1S3-201ENST00000334271 CARMIL3Q8ND23 1372 aa12.63□□□□□ -0.39
AP1S3-201ENST00000334271 ATXN8OSP0DMR3 200 aa12.62□□□□□ -0.39
AP1S3-201ENST00000334271 RFC4P35249 363 aa12.62□□□□□ -0.39
AP1S3-201ENST00000334271 LRRFIP1Q32MZ4 808 aaKnown RBP12.62□□□□□ -0.39
AP1S3-201ENST00000334271 LONRF3Q496Y0 759 aa12.62□□□□□ -0.39
AP1S3-201ENST00000334271 ARMCX6Q7L4S7 300 aa12.62□□□□□ -0.39
AP1S3-201ENST00000334271 RAD50Q92878 1312 aa12.62□□□□□ -0.39
AP1S3-201ENST00000334271 GPTP24298 496 aa12.62□□□□□ -0.39
AP1S3-201ENST00000334271 TPTE2Q6XPS3 522 aa12.62□□□□□ -0.39
AP1S3-201ENST00000334271 OTUD7AQ8TE49 926 aaPredicted RBP12.62□□□□□ -0.39
AP1S3-201ENST00000334271 EAF2Q96CJ1 260 aaPredicted RBP12.62□□□□□ -0.39
AP1S3-201ENST00000334271 IL17RAQ96F46 866 aa12.62□□□□□ -0.39
AP1S3-201ENST00000334271 CDC5LQ99459 802 aaKnown RBP12.62□□□□□ -0.39
AP1S3-201ENST00000334271 C22orf23Q9BZE7 217 aa12.62□□□□□ -0.39
AP1S3-201ENST00000334271 FOSBP53539 338 aa12.61□□□□□ -0.39
AP1S3-201ENST00000334271 CHMP3Q9Y3E7 222 aa12.61□□□□□ -0.39
AP1S3-201ENST00000334271 STK24Q9Y6E0 443 aa12.61□□□□□ -0.39
AP1S3-201ENST00000334271 ITGA6P23229 1130 aa12.61□□□□□ -0.39
AP1S3-201ENST00000334271 MCCD1P59942 119 aaPredicted RBP12.61□□□□□ -0.39
AP1S3-201ENST00000334271 BECN1Q14457 450 aa12.61□□□□□ -0.39
AP1S3-201ENST00000334271 ARHGEF1Q92888 912 aaKnown RBP12.61□□□□□ -0.39
AP1S3-201ENST00000334271 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.61□□□□□ -0.39
AP1S3-201ENST00000334271 POLD1P28340 1107 aa12.6□□□□□ -0.39
AP1S3-201ENST00000334271 TFCP2Q12800 502 aa12.6□□□□□ -0.39
AP1S3-201ENST00000334271 SEMA3FQ13275 785 aa12.6□□□□□ -0.39
AP1S3-201ENST00000334271 TXNRD1Q16881 649 aa12.6□□□□□ -0.39
AP1S3-201ENST00000334271 BCL2L12Q9HB09 334 aa12.6□□□□□ -0.39
AP1S3-201ENST00000334271 SNRKQ9NRH2 765 aa12.6□□□□□ -0.39
AP1S3-201ENST00000334271 TRIM37O94972 964 aa12.6□□□□□ -0.39
AP1S3-201ENST00000334271 CHMLP26374 656 aa12.6□□□□□ -0.39
AP1S3-201ENST00000334271 PTF1AQ7RTS3 328 aa12.6□□□□□ -0.39
AP1S3-201ENST00000334271 NUTM1Q86Y26 1132 aa12.6□□□□□ -0.39
AP1S3-201ENST00000334271 HS6ST3Q8IZP7 471 aa12.6□□□□□ -0.39
AP1S3-201ENST00000334271 MAP4K4O95819 1239 aaPredicted RBP12.59□□□□□ -0.39
AP1S3-201ENST00000334271 USPL1Q5W0Q7 1092 aa12.59□□□□□ -0.39
AP1S3-201ENST00000334271 LDHAL6AQ6ZMR3 332 aa12.59□□□□□ -0.39
AP1S3-201ENST00000334271 SIL1Q9H173 461 aa12.59□□□□□ -0.39
AP1S3-201ENST00000334271 CASZ1Q86V15 1759 aa12.59□□□□□ -0.39
AP1S3-201ENST00000334271 TRIM6-TRIM34B2RNG4 842 aa12.58□□□□□ -0.39
AP1S3-201ENST00000334271 IGHMBP2P38935 993 aaKnown RBP12.58□□□□□ -0.39
AP1S3-201ENST00000334271 HAUS7Q99871 368 aa12.58□□□□□ -0.39
AP1S3-201ENST00000334271 ESYT1Q9BSJ8 1104 aa12.58□□□□□ -0.39
AP1S3-201ENST00000334271 LRRC4BQ9NT99 713 aa12.58□□□□□ -0.39
AP1S3-201ENST00000334271 CCDC158Q5M9N0 1113 aa12.58□□□□□ -0.4
AP1S3-201ENST00000334271 GREM2Q9H772 168 aa12.58□□□□□ -0.4
AP1S3-201ENST00000334271 ARIH1Q9Y4X5 557 aaPredicted RBP12.58□□□□□ -0.4
AP1S3-201ENST00000334271 SEC24BO95487 1268 aa12.57□□□□□ -0.4
AP1S3-201ENST00000334271 HSP90AA2PQ14568 343 aaPredicted RBP12.57□□□□□ -0.4
AP1S3-201ENST00000334271 TBC1D9BQ66K14 1250 aa12.57□□□□□ -0.4
AP1S3-201ENST00000334271 MORC4Q8TE76 937 aa12.57□□□□□ -0.4
AP1S3-201ENST00000334271 NLRP3Q96P20 1036 aa12.57□□□□□ -0.4
AP1S3-201ENST00000334271 UBA5Q9GZZ9 404 aa12.57□□□□□ -0.4
AP1S3-201ENST00000334271 DBNLQ9UJU6 430 aaKnown RBP12.57□□□□□ -0.4
AP1S3-201ENST00000334271 NRXN2Q9P2S2 1712 aa12.57□□□□□ -0.4
AP1S3-201ENST00000334271 PDE8BO95263 885 aa12.57□□□□□ -0.4
AP1S3-201ENST00000334271 UQCRFS1P1P0C7P4 283 aa12.57□□□□□ -0.4
AP1S3-201ENST00000334271 NBPF5PQ86XG9 351 aaPredicted RBP12.57□□□□□ -0.4
AP1S3-201ENST00000334271 OTUD6BQ8N6M0 293 aa12.57□□□□□ -0.4
AP1S3-201ENST00000334271 VGLL2Q8N8G2 317 aa12.57□□□□□ -0.4
AP1S3-201ENST00000334271 LPIN2Q92539 896 aa12.57□□□□□ -0.4
AP1S3-201ENST00000334271 JARID2Q92833 1246 aaPredicted RBP12.57□□□□□ -0.4
AP1S3-201ENST00000334271 SNX21Q969T3 373 aa12.57□□□□□ -0.4
AP1S3-201ENST00000334271 AKT1S1Q96B36 256 aa12.57□□□□□ -0.4
AP1S3-201ENST00000334271 TSPAN18Q96SJ8 248 aa12.57□□□□□ -0.4
AP1S3-201ENST00000334271 USP26Q9BXU7 913 aa12.57□□□□□ -0.4
AP1S3-201ENST00000334271 CNNM1Q9NRU3 951 aa12.57□□□□□ -0.4
AP1S3-201ENST00000334271 PUM3Q15397 648 aaKnown RBP12.56□□□□□ -0.4
AP1S3-201ENST00000334271 FAM182BQ5T319 152 aa12.56□□□□□ -0.4
AP1S3-201ENST00000334271 TMC4Q7Z404 712 aa12.56□□□□□ -0.4
AP1S3-201ENST00000334271 NLGN1Q8N2Q7 840 aa12.56□□□□□ -0.4
AP1S3-201ENST00000334271 RILPL2Q969X0 211 aa12.56□□□□□ -0.4
AP1S3-201ENST00000334271 MPHOSPH8Q99549 860 aa12.56□□□□□ -0.4
AP1S3-201ENST00000334271 BSDC1Q9NW68 430 aaPredicted RBP12.56□□□□□ -0.4
AP1S3-201ENST00000334271 TMEM51Q9NW97 253 aa12.56□□□□□ -0.4
AP1S3-201ENST00000334271 RGS17Q9UGC6 210 aaPredicted RBP12.56□□□□□ -0.4
AP1S3-201ENST00000334271 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.56□□□□□ -0.4
AP1S3-201ENST00000334271 A0A1B0GUL7 405 aa12.56□□□□□ -0.4
AP1S3-201ENST00000334271 METTL24Q5JXM2 366 aa12.56□□□□□ -0.4
AP1S3-201ENST00000334271 KLHDC4Q8TBB5 520 aa12.56□□□□□ -0.4
AP1S3-201ENST00000334271 PNMA2Q9UL42 364 aa12.56□□□□□ -0.4
AP1S3-201ENST00000334271 A0A1B0GUL6 1792 aa12.55□□□□□ -0.4
AP1S3-201ENST00000334271 SGSM2O43147 1006 aa12.55□□□□□ -0.4
AP1S3-201ENST00000334271 APBA3O96018 575 aa12.55□□□□□ -0.4
AP1S3-201ENST00000334271 ZFYP08048 801 aaPredicted RBP12.55□□□□□ -0.4
AP1S3-201ENST00000334271 TM4SF1P30408 202 aa12.55□□□□□ -0.4
AP1S3-201ENST00000334271 TTF1Q15361 905 aaPredicted RBP12.55□□□□□ -0.4
AP1S3-201ENST00000334271 ATP2B3Q16720 1220 aa12.55□□□□□ -0.4
AP1S3-201ENST00000334271 LRRC24Q50LG9 513 aa12.55□□□□□ -0.4
AP1S3-201ENST00000334271 ANKRD18AQ8IVF6 992 aa12.55□□□□□ -0.4
AP1S3-201ENST00000334271 CCDC8Q9H0W5 538 aaPredicted RBP12.55□□□□□ -0.4
AP1S3-201ENST00000334271 DIAPH3Q9NSV4 1193 aa12.55□□□□□ -0.4
AP1S3-201ENST00000334271 IRF6O14896 467 aa12.54□□□□□ -0.4
AP1S3-201ENST00000334271 SLC5A1P13866 664 aa12.54□□□□□ -0.4
AP1S3-201ENST00000334271 FGFR2P21802 821 aa12.54□□□□□ -0.4
AP1S3-201ENST00000334271 RABEP1Q15276 862 aa12.54□□□□□ -0.4
AP1S3-201ENST00000334271 DRC1Q96MC2 740 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms