RNA–Protein interactions for RNA: ENST00000334186.8

PPFIA3-201, Transcript of PTPRF interacting protein alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPFIA3, Length 4,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-201ENST00000334186 RPGRQ92834 1020 aaKnown RBP18.88■□□□□ 0.61
PPFIA3-201ENST00000334186 ERO1AQ96HE7 468 aa18.88■□□□□ 0.61
PPFIA3-201ENST00000334186 METP08581 1390 aa18.87■□□□□ 0.61
PPFIA3-201ENST00000334186 SLC9C2Q5TAH2 1124 aa18.87■□□□□ 0.61
PPFIA3-201ENST00000334186 NUP88Q99567 741 aaPredicted RBP18.87■□□□□ 0.61
PPFIA3-201ENST00000334186 DCAF5Q96JK2 942 aa18.87■□□□□ 0.61
PPFIA3-201ENST00000334186 TSG101Q99816 390 aa18.87■□□□□ 0.61
PPFIA3-201ENST00000334186 PPP1R12BO60237 982 aaPredicted RBP18.86■□□□□ 0.61
PPFIA3-201ENST00000334186 CCDC96Q2M329 555 aa18.86■□□□□ 0.61
PPFIA3-201ENST00000334186 TMTC2Q8N394 836 aa18.86■□□□□ 0.61
PPFIA3-201ENST00000334186 SYT10Q6XYQ8 523 aa18.86■□□□□ 0.61
PPFIA3-201ENST00000334186 PYM1Q9BRP8 204 aaKnown RBP18.86■□□□□ 0.61
PPFIA3-201ENST00000334186 CNNM2Q9H8M5 875 aa18.86■□□□□ 0.61
PPFIA3-201ENST00000334186 TCP11L1Q9NUJ3 509 aa18.86■□□□□ 0.61
PPFIA3-201ENST00000334186 PPP1R1BQ9UD71 204 aaPredicted RBP18.86■□□□□ 0.61
PPFIA3-201ENST00000334186 FGFR1OPO95684 399 aaKnown RBP18.86■□□□□ 0.61
PPFIA3-201ENST00000334186 BAG3O95817 575 aa18.86■□□□□ 0.61
PPFIA3-201ENST00000334186 LIG1P18858 919 aa18.86■□□□□ 0.61
PPFIA3-201ENST00000334186 CACNA2D4Q7Z3S7 1137 aa18.86■□□□□ 0.61
PPFIA3-201ENST00000334186 SYT1P21579 422 aa18.86■□□□□ 0.61
PPFIA3-201ENST00000334186 UBA7P41226 1012 aa18.86■□□□□ 0.61
PPFIA3-201ENST00000334186 NGLY1Q96IV0 654 aa18.86■□□□□ 0.61
PPFIA3-201ENST00000334186 KAT14Q9H8E8 782 aa18.86■□□□□ 0.61
PPFIA3-201ENST00000334186 BCL2L12Q9HB09 334 aa18.86■□□□□ 0.61
PPFIA3-201ENST00000334186 YEATS4O95619 227 aa18.85■□□□□ 0.61
PPFIA3-201ENST00000334186 HOXB7P09629 217 aa18.85■□□□□ 0.61
PPFIA3-201ENST00000334186 BICC1Q9H694 974 aaKnown RBP18.85■□□□□ 0.61
PPFIA3-201ENST00000334186 MAGI2Q86UL8 1455 aa18.85■□□□□ 0.61
PPFIA3-201ENST00000334186 HECW2Q9P2P5 1572 aa18.85■□□□□ 0.61
PPFIA3-201ENST00000334186 PRC1O43663 620 aa18.85■□□□□ 0.61
PPFIA3-201ENST00000334186 NEFHP12036 1026 aa18.85■□□□□ 0.61
PPFIA3-201ENST00000334186 ENOX2Q16206 610 aaKnown RBP18.85■□□□□ 0.61
PPFIA3-201ENST00000334186 SPTY2D1Q68D10 685 aaPredicted RBP18.85■□□□□ 0.61
PPFIA3-201ENST00000334186 RUFY3Q7L099 469 aa18.85■□□□□ 0.61
PPFIA3-201ENST00000334186 TMEM63CQ9P1W3 806 aa18.85■□□□□ 0.61
PPFIA3-201ENST00000334186 TFCP2Q12800 502 aa18.85■□□□□ 0.61
PPFIA3-201ENST00000334186 ESR2Q92731 530 aa18.85■□□□□ 0.61
PPFIA3-201ENST00000334186 INCENPQ9NQS7 918 aa18.85■□□□□ 0.61
PPFIA3-201ENST00000334186 RNF113AO15541 343 aaKnown RBP18.84■□□□□ 0.61
PPFIA3-201ENST00000334186 CYP7A1P22680 504 aa18.84■□□□□ 0.61
PPFIA3-201ENST00000334186 SF3B2Q13435 895 aaKnown RBP18.84■□□□□ 0.61
PPFIA3-201ENST00000334186 CRNKL1Q9BZJ0 848 aaKnown RBP18.84■□□□□ 0.61
PPFIA3-201ENST00000334186 RNF216Q9NWF9 866 aaPredicted RBP18.84■□□□□ 0.61
PPFIA3-201ENST00000334186 C6orf229H3BNL8 230 aa18.83■□□□□ 0.61
PPFIA3-201ENST00000334186 ZRSR2Q15696 482 aaKnown RBP18.83■□□□□ 0.61
PPFIA3-201ENST00000334186 RTN1Q16799 776 aa18.83■□□□□ 0.61
PPFIA3-201ENST00000334186 SLC4A4Q9Y6R1 1079 aa18.83■□□□□ 0.61
PPFIA3-201ENST00000334186 CTAGE15A4D2H0 777 aa18.83■□□□□ 0.6
PPFIA3-201ENST00000334186 CTAGE8P0CG41 777 aa18.83■□□□□ 0.6
PPFIA3-201ENST00000334186 DHX32Q7L7V1 743 aaKnown RBP18.83■□□□□ 0.6
PPFIA3-201ENST00000334186 CTAGE6Q86UF2 777 aa18.83■□□□□ 0.6
PPFIA3-201ENST00000334186 CTAGE4Q8IX94 777 aa18.83■□□□□ 0.6
PPFIA3-201ENST00000334186 DDX17Q92841 729 aaKnown RBP18.83■□□□□ 0.6
PPFIA3-201ENST00000334186 KAT6BQ8WYB5 2073 aa18.83■□□□□ 0.6
PPFIA3-201ENST00000334186 SBNO2Q9Y2G9 1366 aa18.83■□□□□ 0.6
PPFIA3-201ENST00000334186 IL2RBP14784 551 aa18.83■□□□□ 0.6
PPFIA3-201ENST00000334186 CLASP1Q7Z460 1538 aa18.83■□□□□ 0.6
PPFIA3-201ENST00000334186 BMP15O95972 392 aa18.82■□□□□ 0.6
PPFIA3-201ENST00000334186 ANKRD18AQ8IVF6 992 aa18.82■□□□□ 0.6
PPFIA3-201ENST00000334186 GOLGA1Q92805 767 aa18.82■□□□□ 0.6
PPFIA3-201ENST00000334186 LRRIQ1Q96JM4 1722 aa18.82■□□□□ 0.6
PPFIA3-201ENST00000334186 USO1O60763 962 aaKnown RBP18.82■□□□□ 0.6
PPFIA3-201ENST00000334186 LMOD1P29536 600 aaPredicted RBP18.82■□□□□ 0.6
PPFIA3-201ENST00000334186 TTC31Q49AM3 519 aaPredicted RBP18.82■□□□□ 0.6
PPFIA3-201ENST00000334186 MTIF2P46199 727 aaKnown RBP18.82■□□□□ 0.6
PPFIA3-201ENST00000334186 AMPD3Q01432 767 aa18.82■□□□□ 0.6
PPFIA3-201ENST00000334186 TICAM2Q86XR7 235 aa18.82■□□□□ 0.6
PPFIA3-201ENST00000334186 MICALL1Q8N3F8 863 aa18.82■□□□□ 0.6
PPFIA3-201ENST00000334186 CALML4Q96GE6 196 aa18.82■□□□□ 0.6
PPFIA3-201ENST00000334186 IQSEC3Q9UPP2 1182 aaPredicted RBP18.82■□□□□ 0.6
PPFIA3-201ENST00000334186 NBPF7P0C2Y1 421 aaPredicted RBP18.81■□□□□ 0.6
PPFIA3-201ENST00000334186 IDEP14735 1019 aa18.81■□□□□ 0.6
PPFIA3-201ENST00000334186 VPS18Q9P253 973 aa18.81■□□□□ 0.6
PPFIA3-201ENST00000334186 PHF23Q9BUL5 403 aaPredicted RBP18.81■□□□□ 0.6
PPFIA3-201ENST00000334186 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.81■□□□□ 0.66e-6■■■■■ 48.1
PPFIA3-201ENST00000334186 AOX1Q06278 1338 aa18.81■□□□□ 0.6
PPFIA3-201ENST00000334186 CDC42BPBQ9Y5S2 1711 aa18.81■□□□□ 0.6
PPFIA3-201ENST00000334186 VGLL3A8MV65 326 aa18.81■□□□□ 0.6
PPFIA3-201ENST00000334186 SPTLC2O15270 562 aa18.81■□□□□ 0.6
PPFIA3-201ENST00000334186 APOBRQ0VD83 1088 aa18.81■□□□□ 0.6
PPFIA3-201ENST00000334186 WWC2Q6AWC2 1192 aa18.81■□□□□ 0.6
PPFIA3-201ENST00000334186 STX8Q9UNK0 236 aa18.81■□□□□ 0.6
PPFIA3-201ENST00000334186 KDM5CP41229 1560 aa18.8■□□□□ 0.6
PPFIA3-201ENST00000334186 CPA1P15085 419 aa18.8■□□□□ 0.6
PPFIA3-201ENST00000334186 NBPF6Q5VWK0 638 aa18.8■□□□□ 0.6
PPFIA3-201ENST00000334186 NBPF5PQ86XG9 351 aaPredicted RBP18.8■□□□□ 0.6
PPFIA3-201ENST00000334186 NBPF4Q96M43 638 aa18.8■□□□□ 0.6
PPFIA3-201ENST00000334186 ERVK-7P63135 1459 aa18.8■□□□□ 0.6
PPFIA3-201ENST00000334186 PTPDC1A2A3K4 754 aa18.8■□□□□ 0.6
PPFIA3-201ENST00000334186 UBA5Q9GZZ9 404 aa18.8■□□□□ 0.6
PPFIA3-201ENST00000334186 PHACTR2O75167 634 aa18.8■□□□□ 0.6
PPFIA3-201ENST00000334186 MARCKSP29966 332 aaPredicted RBP18.8■□□□□ 0.6
PPFIA3-201ENST00000334186 VPS36Q86VN1 386 aa18.8■□□□□ 0.6
PPFIA3-201ENST00000334186 DYDC1Q8WWB3 177 aa18.8■□□□□ 0.6
PPFIA3-201ENST00000334186 VAT1LQ9HCJ6 419 aa18.8■□□□□ 0.6
PPFIA3-201ENST00000334186 IFIT1BQ5T764 474 aaKnown RBP18.79■□□□□ 0.6
PPFIA3-201ENST00000334186 CHST3Q7LGC8 479 aa18.79■□□□□ 0.6
PPFIA3-201ENST00000334186 PLEKHG3A1L390 1219 aa18.79■□□□□ 0.6
PPFIA3-201ENST00000334186 TNIP1Q15025 636 aa18.79■□□□□ 0.6
PPFIA3-201ENST00000334186 ZNF790Q6PG37 636 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms