RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 RTN1Q16799 776 aa13.01□□□□□ -0.33
POLR1B-202ENST00000333990 ODF2Q5BJF6 829 aa13.01□□□□□ -0.33
POLR1B-202ENST00000333990 TTLL7Q6ZT98 887 aa13.01□□□□□ -0.33
POLR1B-202ENST00000333990 CNKSR1Q969H4 720 aa13.01□□□□□ -0.33
POLR1B-202ENST00000333990 PYM1Q9BRP8 204 aaKnown RBP13.01□□□□□ -0.33
POLR1B-202ENST00000333990 A0A0U1RQG5 324 aaPredicted RBP13.01□□□□□ -0.33
POLR1B-202ENST00000333990 APPBP2Q92624 585 aa13.01□□□□□ -0.33
POLR1B-202ENST00000333990 HOOK2Q96ED9 719 aa13.01□□□□□ -0.33
POLR1B-202ENST00000333990 C1orf167Q5SNV9 1468 aa13.01□□□□□ -0.33
POLR1B-202ENST00000333990 DLC1Q96QB1 1528 aa13.01□□□□□ -0.33
POLR1B-202ENST00000333990 BMP15O95972 392 aa13.01□□□□□ -0.33
POLR1B-202ENST00000333990 SYCP1Q15431 976 aa13.01□□□□□ -0.33
POLR1B-202ENST00000333990 MPNDQ8N594 471 aa13.01□□□□□ -0.33
POLR1B-202ENST00000333990 PDILTQ8N807 584 aa13.01□□□□□ -0.33
POLR1B-202ENST00000333990 ZNHIT6Q9NWK9 470 aaKnown RBP13.01□□□□□ -0.33
POLR1B-202ENST00000333990 RTL9Q8NET4 1388 aa13.01□□□□□ -0.33
POLR1B-202ENST00000333990 TRIM37O94972 964 aa13□□□□□ -0.33
POLR1B-202ENST00000333990 PDE4CQ08493 712 aa13□□□□□ -0.33
POLR1B-202ENST00000333990 TEX11Q8IYF3 940 aa13□□□□□ -0.33
POLR1B-202ENST00000333990 SLC26A6Q9BXS9 759 aa13□□□□□ -0.33
POLR1B-202ENST00000333990 USP44Q9H0E7 712 aa13□□□□□ -0.33
POLR1B-202ENST00000333990 VAT1LQ9HCJ6 419 aa13□□□□□ -0.33
POLR1B-202ENST00000333990 KIF20AO95235 890 aa13□□□□□ -0.33
POLR1B-202ENST00000333990 CHMLP26374 656 aa13□□□□□ -0.33
POLR1B-202ENST00000333990 PPP4R3AQ6IN85 833 aa13□□□□□ -0.33
POLR1B-202ENST00000333990 TBC1D2Q9BYX2 928 aa13□□□□□ -0.33
POLR1B-202ENST00000333990 ZSCAN16Q9H4T2 348 aaPredicted RBP13□□□□□ -0.33
POLR1B-202ENST00000333990 SH2D4AQ9H788 454 aa13□□□□□ -0.33
POLR1B-202ENST00000333990 LUC7LQ9NQ29 371 aaKnown RBP13□□□□□ -0.33
POLR1B-202ENST00000333990 TCP11L1Q9NUJ3 509 aa13□□□□□ -0.33
POLR1B-202ENST00000333990 SERPINC1P01008 464 aa13□□□□□ -0.33
POLR1B-202ENST00000333990 MIGA1Q8NAN2 632 aa13□□□□□ -0.33
POLR1B-202ENST00000333990 ZNF594Q96JF6 807 aaPredicted RBP13□□□□□ -0.33
POLR1B-202ENST00000333990 HEG1Q9ULI3 1381 aa13□□□□□ -0.33
POLR1B-202ENST00000333990 NAP1L1P55209 391 aaKnown RBP12.99□□□□□ -0.33
POLR1B-202ENST00000333990 ZBTB1Q9Y2K1 713 aa12.99□□□□□ -0.33
POLR1B-202ENST00000333990 STX6O43752 255 aa12.99□□□□□ -0.33
POLR1B-202ENST00000333990 BEND3Q5T5X7 828 aa12.99□□□□□ -0.33
POLR1B-202ENST00000333990 TMC4Q7Z404 712 aa12.99□□□□□ -0.33
POLR1B-202ENST00000333990 KBTBD3Q8NAB2 608 aa12.99□□□□□ -0.33
POLR1B-202ENST00000333990 SSH3Q8TE77 659 aa12.99□□□□□ -0.33
POLR1B-202ENST00000333990 AFF2P51816 1311 aa12.99□□□□□ -0.33
POLR1B-202ENST00000333990 CBFA2T2O43439 604 aa12.99□□□□□ -0.33
POLR1B-202ENST00000333990 PRC1O43663 620 aa12.99□□□□□ -0.33
POLR1B-202ENST00000333990 PPP1R12BO60237 982 aaPredicted RBP12.99□□□□□ -0.33
POLR1B-202ENST00000333990 SSFA2P28290 1259 aa12.99□□□□□ -0.33
POLR1B-202ENST00000333990 GJB2P29033 226 aa12.99□□□□□ -0.33
POLR1B-202ENST00000333990 RBM25P49756 843 aaKnown RBP12.99□□□□□ -0.33
POLR1B-202ENST00000333990 GUCY1B3Q02153 619 aa12.99□□□□□ -0.33
POLR1B-202ENST00000333990 MAP3K11Q16584 847 aa12.99□□□□□ -0.33
POLR1B-202ENST00000333990 CCAR2Q8N163 923 aaKnown RBP12.99□□□□□ -0.33
POLR1B-202ENST00000333990 SMTNL1A8MU46 457 aa12.99□□□□□ -0.33
POLR1B-202ENST00000333990 B4DLN1 442 aa12.99□□□□□ -0.33
POLR1B-202ENST00000333990 MBD4O95243 580 aa12.99□□□□□ -0.33
POLR1B-202ENST00000333990 MRPL12P52815 198 aaKnown RBP12.99□□□□□ -0.33
POLR1B-202ENST00000333990 BRPF1P55201 1214 aaPredicted RBP12.99□□□□□ -0.33
POLR1B-202ENST00000333990 RBM26Q5T8P6 1007 aaKnown RBP12.99□□□□□ -0.33
POLR1B-202ENST00000333990 USPL1Q5W0Q7 1092 aa12.99□□□□□ -0.33
POLR1B-202ENST00000333990 GOLGA6L1Q8N7Z2 621 aa12.99□□□□□ -0.33
POLR1B-202ENST00000333990 ERVV-1B6SEH8 477 aa12.98□□□□□ -0.33
POLR1B-202ENST00000333990 ATP2B4P23634 1241 aa12.98□□□□□ -0.33
POLR1B-202ENST00000333990 NIM1KQ8IY84 436 aa12.98□□□□□ -0.33
POLR1B-202ENST00000333990 KLHDC4Q8TBB5 520 aa12.98□□□□□ -0.33
POLR1B-202ENST00000333990 PNMA6EA0A0J9YXQ4 647 aa12.98□□□□□ -0.33
POLR1B-202ENST00000333990 SLC4A8Q2Y0W8 1093 aa12.98□□□□□ -0.33
POLR1B-202ENST00000333990 CTAGE5O15320 804 aa12.98□□□□□ -0.33
POLR1B-202ENST00000333990 DHX32Q7L7V1 743 aaKnown RBP12.98□□□□□ -0.33
POLR1B-202ENST00000333990 WWC3Q9ULE0 1092 aa12.98□□□□□ -0.33
POLR1B-202ENST00000333990 CCDC144CPQ8IYA2 1237 aa12.97□□□□□ -0.33
POLR1B-202ENST00000333990 LRRIQ1Q96JM4 1722 aa12.97□□□□□ -0.33
POLR1B-202ENST00000333990 SPATA31A6Q5VVP1 1343 aa12.97□□□□□ -0.33
POLR1B-202ENST00000333990 CCP110O43303 1012 aa12.97□□□□□ -0.33
POLR1B-202ENST00000333990 CALML3P27482 149 aa12.97□□□□□ -0.33
POLR1B-202ENST00000333990 RBM6P78332 1123 aaKnown RBP12.97□□□□□ -0.33
POLR1B-202ENST00000333990 MED14O60244 1454 aa12.97□□□□□ -0.33
POLR1B-202ENST00000333990 ZNF853P0CG23 659 aa12.97□□□□□ -0.33
POLR1B-202ENST00000333990 CREB3L3Q68CJ9 461 aa12.97□□□□□ -0.33
POLR1B-202ENST00000333990 TXLNBQ8N3L3 684 aa12.97□□□□□ -0.33
POLR1B-202ENST00000333990 PPFIBP1Q86W92 1011 aa12.97□□□□□ -0.33
POLR1B-202ENST00000333990 PIGBQ92521 554 aa12.97□□□□□ -0.33
POLR1B-202ENST00000333990 CALML4Q96GE6 196 aa12.97□□□□□ -0.33
POLR1B-202ENST00000333990 TMX3Q96JJ7 454 aa12.97□□□□□ -0.33
POLR1B-202ENST00000333990 TANGO6Q9C0B7 1094 aa12.97□□□□□ -0.33
POLR1B-202ENST00000333990 ATP5JP18859 108 aa12.96□□□□□ -0.33
POLR1B-202ENST00000333990 UBA7P41226 1012 aa12.96□□□□□ -0.33
POLR1B-202ENST00000333990 Q6ZUG5 572 aa12.96□□□□□ -0.33
POLR1B-202ENST00000333990 PDCL3Q9H2J4 239 aa12.96□□□□□ -0.33
POLR1B-202ENST00000333990 GJA3Q9Y6H8 435 aa12.96□□□□□ -0.33
POLR1B-202ENST00000333990 TAF5LO75529 589 aa12.96□□□□□ -0.33
POLR1B-202ENST00000333990 AMPD3Q01432 767 aa12.96□□□□□ -0.33
POLR1B-202ENST00000333990 RNF123Q5XPI4 1314 aa12.96□□□□□ -0.33
POLR1B-202ENST00000333990 PALLDQ8WX93 1383 aa12.96□□□□□ -0.34
POLR1B-202ENST00000333990 ZNF592Q92610 1267 aa12.96□□□□□ -0.34
POLR1B-202ENST00000333990 CPSF1Q10570 1443 aaKnown RBP12.96□□□□□ -0.34
POLR1B-202ENST00000333990 ADAMTS13Q76LX8 1427 aa12.96□□□□□ -0.34
POLR1B-202ENST00000333990 NEXMIFQ5QGS0 1516 aa12.96□□□□□ -0.34
POLR1B-202ENST00000333990 OVOS2A0A0G2JMS6 1433 aa12.95□□□□□ -0.34
POLR1B-202ENST00000333990 OVOS2A0A0J9YW53 1432 aa12.95□□□□□ -0.34
POLR1B-202ENST00000333990 OVOS2Q6IE36 1432 aa12.95□□□□□ -0.34
POLR1B-202ENST00000333990 ALG1Q9BT22 464 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms