RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 FAM184AQ8NB25 1140 aa21.52■■□□□ 1.04
LYSMD4-201ENST00000332728 SHANK3Q9BYB0 1731 aa21.52■■□□□ 1.04
LYSMD4-201ENST00000332728 ANKRD18BA2A2Z9 1011 aa21.52■■□□□ 1.04
LYSMD4-201ENST00000332728 SUSD4Q5VX71 490 aa21.52■■□□□ 1.04
LYSMD4-201ENST00000332728 ZNF830Q96NB3 372 aaPredicted RBP21.52■■□□□ 1.04
LYSMD4-201ENST00000332728 GTF3C6Q969F1 213 aa21.51■■□□□ 1.03
LYSMD4-201ENST00000332728 USP25Q9UHP3 1055 aa21.51■■□□□ 1.03
LYSMD4-201ENST00000332728 TJP1Q07157 1748 aa21.51■■□□□ 1.03
LYSMD4-201ENST00000332728 LAMB4A4D0S4 1761 aa21.51■■□□□ 1.03
LYSMD4-201ENST00000332728 ANKRD1Q15327 319 aa21.51■■□□□ 1.03
LYSMD4-201ENST00000332728 SLC9C2Q5TAH2 1124 aa21.51■■□□□ 1.03
LYSMD4-201ENST00000332728 CCDC144CPQ8IYA2 1237 aa21.51■■□□□ 1.03
LYSMD4-201ENST00000332728 MARCH10Q8NA82 808 aaPredicted RBP21.51■■□□□ 1.03
LYSMD4-201ENST00000332728 A0A087WWV3 80 aa21.5■■□□□ 1.03
LYSMD4-201ENST00000332728 FGAP02671 866 aa21.5■■□□□ 1.03
LYSMD4-201ENST00000332728 UBE2HP62256 183 aa21.5■■□□□ 1.03
LYSMD4-201ENST00000332728 ITPK1Q13572 414 aa21.5■■□□□ 1.03
LYSMD4-201ENST00000332728 PIH1D3Q9NQM4 214 aaKnown RBP21.5■■□□□ 1.03
LYSMD4-201ENST00000332728 RIPOR2Q9Y4F9 1068 aa21.5■■□□□ 1.03
LYSMD4-201ENST00000332728 FOXP2O15409 715 aa21.5■■□□□ 1.03
LYSMD4-201ENST00000332728 CRKLP46109 303 aaKnown RBP21.5■■□□□ 1.03
LYSMD4-201ENST00000332728 FBXW7Q969H0 707 aa21.5■■□□□ 1.03
LYSMD4-201ENST00000332728 TEX13AQ9BXU3 409 aaPredicted RBP21.5■■□□□ 1.03
LYSMD4-201ENST00000332728 SYAP1Q96A49 352 aaPredicted RBP21.49■■□□□ 1.03
LYSMD4-201ENST00000332728 SH3TC1Q8TE82 1336 aa21.49■■□□□ 1.03
LYSMD4-201ENST00000332728 KRT32Q14532 448 aa21.49■■□□□ 1.03
LYSMD4-201ENST00000332728 FAM98CQ17RN3 349 aaKnown RBP21.49■■□□□ 1.03
LYSMD4-201ENST00000332728 DHX32Q7L7V1 743 aaKnown RBP21.49■■□□□ 1.03
LYSMD4-201ENST00000332728 ATP6V1DQ9Y5K8 247 aa21.49■■□□□ 1.03
LYSMD4-201ENST00000332728 BCL9O00512 1426 aa21.49■■□□□ 1.03
LYSMD4-201ENST00000332728 CIAO1O76071 339 aa21.48■■□□□ 1.03
LYSMD4-201ENST00000332728 PTMAP06454 111 aaKnown RBP21.48■■□□□ 1.03
LYSMD4-201ENST00000332728 CSF1RP07333 972 aa21.48■■□□□ 1.03
LYSMD4-201ENST00000332728 HELLSQ9NRZ9 838 aa21.48■■□□□ 1.03
LYSMD4-201ENST00000332728 WWC3Q9ULE0 1092 aa21.48■■□□□ 1.03
LYSMD4-201ENST00000332728 AKAP2Q9Y2D5 859 aa21.48■■□□□ 1.03
LYSMD4-201ENST00000332728 ABCA3Q99758 1704 aa21.48■■□□□ 1.03
LYSMD4-201ENST00000332728 GPAA1O43292 621 aa21.48■■□□□ 1.03
LYSMD4-201ENST00000332728 NUP188Q5SRE5 1749 aa21.48■■□□□ 1.03
LYSMD4-201ENST00000332728 GOLGA6L4A6NEF3 574 aa21.47■■□□□ 1.03
LYSMD4-201ENST00000332728 CTDNEP1O95476 244 aa21.47■■□□□ 1.03
LYSMD4-201ENST00000332728 CCDC183Q5T5S1 534 aa21.47■■□□□ 1.03
LYSMD4-201ENST00000332728 SPATA32Q96LK8 384 aa21.47■■□□□ 1.03
LYSMD4-201ENST00000332728 PTPDC1A2A3K4 754 aa21.47■■□□□ 1.03
LYSMD4-201ENST00000332728 KRT85P78386 507 aa21.47■■□□□ 1.03
LYSMD4-201ENST00000332728 ERCC4Q92889 916 aaPredicted RBP21.47■■□□□ 1.03
LYSMD4-201ENST00000332728 NIP7Q9Y221 180 aaKnown RBP eCLIP21.47■■□□□ 1.03
LYSMD4-201ENST00000332728 UBR2Q8IWV8 1755 aa21.46■■□□□ 1.03
LYSMD4-201ENST00000332728 GPR108Q9NPR9 543 aa21.46■■□□□ 1.03
LYSMD4-201ENST00000332728 CCDC102BQ68D86 513 aa21.46■■□□□ 1.03
LYSMD4-201ENST00000332728 VSIG10Q8N0Z9 540 aa21.46■■□□□ 1.03
LYSMD4-201ENST00000332728 PPP1R9BQ96SB3 815 aa21.46■■□□□ 1.03
LYSMD4-201ENST00000332728 PALLDQ8WX93 1383 aa21.45■■□□□ 1.02
LYSMD4-201ENST00000332728 LOC102724428A0A0B4J2F2 783 aa21.45■■□□□ 1.02
LYSMD4-201ENST00000332728 SIK1P57059 783 aa21.45■■□□□ 1.02
LYSMD4-201ENST00000332728 INTS5Q6P9B9 1019 aaKnown RBP21.45■■□□□ 1.02
LYSMD4-201ENST00000332728 BICD2Q8TD16 824 aa21.45■■□□□ 1.02
LYSMD4-201ENST00000332728 DACT1Q9NYF0 836 aa21.45■■□□□ 1.02
LYSMD4-201ENST00000332728 RIC1Q4ADV7 1423 aa21.45■■□□□ 1.02
LYSMD4-201ENST00000332728 BCAMP50895 628 aa21.44■■□□□ 1.02
LYSMD4-201ENST00000332728 TSGA10IPQ3SY00 556 aa21.44■■□□□ 1.02
LYSMD4-201ENST00000332728 C8orf37Q96NL8 207 aa21.44■■□□□ 1.02
LYSMD4-201ENST00000332728 MPHOSPH8Q99549 860 aa21.44■■□□□ 1.02
LYSMD4-201ENST00000332728 SENP2Q9HC62 589 aa21.44■■□□□ 1.02
LYSMD4-201ENST00000332728 JCADQ9P266 1359 aa21.44■■□□□ 1.02
LYSMD4-201ENST00000332728 TRIM28Q13263 835 aaKnown RBP21.44■■□□□ 1.02
LYSMD4-201ENST00000332728 NSUN7Q8NE18 718 aaKnown RBP21.44■■□□□ 1.02
LYSMD4-201ENST00000332728 MYL10Q9BUA6 226 aa21.44■■□□□ 1.02
LYSMD4-201ENST00000332728 DSCC1Q9BVC3 393 aa21.44■■□□□ 1.02
LYSMD4-201ENST00000332728 ABCC6O95255 1503 aa21.44■■□□□ 1.02
LYSMD4-201ENST00000332728 PDE8AO60658 829 aa21.43■■□□□ 1.02
LYSMD4-201ENST00000332728 ZNF532Q9HCE3 1301 aa21.43■■□□□ 1.02
LYSMD4-201ENST00000332728 ITGB4P16144 1822 aa21.43■■□□□ 1.02
LYSMD4-201ENST00000332728 PDE8BO95263 885 aa21.43■■□□□ 1.02
LYSMD4-201ENST00000332728 MIGA1Q8NAN2 632 aa21.43■■□□□ 1.02
LYSMD4-201ENST00000332728 PRC1O43663 620 aa21.42■■□□□ 1.02
LYSMD4-201ENST00000332728 MSNP26038 577 aaKnown RBP21.42■■□□□ 1.02
LYSMD4-201ENST00000332728 PDIA3P30101 505 aaKnown RBP21.42■■□□□ 1.02
LYSMD4-201ENST00000332728 CLCN1P35523 988 aa21.42■■□□□ 1.02
LYSMD4-201ENST00000332728 SLC51AQ86UW1 340 aa21.42■■□□□ 1.02
LYSMD4-201ENST00000332728 TOMM22Q9NS69 142 aa21.42■■□□□ 1.02
LYSMD4-201ENST00000332728 CCDC87Q9NVE4 849 aa21.42■■□□□ 1.02
LYSMD4-201ENST00000332728 JAG2Q9Y219 1238 aa21.42■■□□□ 1.02
LYSMD4-201ENST00000332728 KLF18A0A0U1RQI7 1052 aa21.42■■□□□ 1.02
LYSMD4-201ENST00000332728 POLR3DP05423 398 aaPredicted RBP21.42■■□□□ 1.02
LYSMD4-201ENST00000332728 PDCP20941 246 aa21.42■■□□□ 1.02
LYSMD4-201ENST00000332728 LEO1Q8WVC0 666 aaPredicted RBP21.42■■□□□ 1.02
LYSMD4-201ENST00000332728 IMMTQ16891 758 aaKnown RBP21.42■■□□□ 1.02
LYSMD4-201ENST00000332728 RRP12Q5JTH9 1297 aaKnown RBP21.42■■□□□ 1.02
LYSMD4-201ENST00000332728 C3orf67Q6ZVT6 689 aa21.42■■□□□ 1.02
LYSMD4-201ENST00000332728 C17orf53Q8N3J3 647 aaPredicted RBP21.42■■□□□ 1.02
LYSMD4-201ENST00000332728 UBE2Q2LH0YL09 131 aa21.41■■□□□ 1.02
LYSMD4-201ENST00000332728 SMIM22K7EJ46 135 aa21.41■■□□□ 1.02
LYSMD4-201ENST00000332728 PRKAB2O43741 272 aa21.41■■□□□ 1.02
LYSMD4-201ENST00000332728 NR1I2O75469 434 aa21.41■■□□□ 1.02
LYSMD4-201ENST00000332728 EXOSC10Q01780 885 aaKnown RBP21.41■■□□□ 1.02
LYSMD4-201ENST00000332728 TMEM87AQ8NBN3 555 aa21.41■■□□□ 1.02
LYSMD4-201ENST00000332728 PGBD1Q96JS3 809 aa21.41■■□□□ 1.02
LYSMD4-201ENST00000332728 AIFM3Q96NN9 605 aa21.41■■□□□ 1.02
LYSMD4-201ENST00000332728 GOLGA8BA8MQT2 603 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms