RNA–Protein interactions for RNA: ENST00000332118.10

SRPRA-201, Transcript of SRP receptor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPRA, Length 3,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-201ENST00000332118 TTC39AQ5SRH9 613 aa16.27■□□□□ 0.2
SRPRA-201ENST00000332118 NDUFB9Q9Y6M9 179 aa16.27■□□□□ 0.2
SRPRA-201ENST00000332118 ONECUT3O60422 494 aaPredicted RBP16.27■□□□□ 0.2
SRPRA-201ENST00000332118 GPTP24298 496 aa16.27■□□□□ 0.2
SRPRA-201ENST00000332118 PUM3Q15397 648 aaKnown RBP16.27■□□□□ 0.2
SRPRA-201ENST00000332118 LDHAL6AQ6ZMR3 332 aa16.27■□□□□ 0.2
SRPRA-201ENST00000332118 STOX1Q6ZVD7 989 aa16.27■□□□□ 0.2
SRPRA-201ENST00000332118 LPIN2Q92539 896 aa16.27■□□□□ 0.2
SRPRA-201ENST00000332118 APPBP2Q92624 585 aa16.27■□□□□ 0.2
SRPRA-201ENST00000332118 M0R2C6 588 aa16.27■□□□□ 0.19
SRPRA-201ENST00000332118 CHGBP05060 677 aa16.27■□□□□ 0.19
SRPRA-201ENST00000332118 TBC1D2BQ9UPU7 963 aa16.27■□□□□ 0.19
SRPRA-201ENST00000332118 MTMR6Q9Y217 621 aa16.27■□□□□ 0.19
SRPRA-201ENST00000332118 F13A1P00488 732 aa16.26■□□□□ 0.19
SRPRA-201ENST00000332118 UQCRFS1P1P0C7P4 283 aa16.26■□□□□ 0.19
SRPRA-201ENST00000332118 MCAMP43121 646 aa16.26■□□□□ 0.19
SRPRA-201ENST00000332118 SCARF1Q14162 830 aa16.26■□□□□ 0.19
SRPRA-201ENST00000332118 SLC10A5Q5PT55 438 aa16.26■□□□□ 0.19
SRPRA-201ENST00000332118 CCDC129Q6ZRS4 1044 aa16.26■□□□□ 0.19
SRPRA-201ENST00000332118 SYTL4Q96C24 671 aaPredicted RBP16.26■□□□□ 0.19
SRPRA-201ENST00000332118 LLPHQ9BRT6 129 aaKnown RBP16.26■□□□□ 0.19
SRPRA-201ENST00000332118 SMC3Q9UQE7 1217 aa16.26■□□□□ 0.19
SRPRA-201ENST00000332118 DDX49Q9Y6V7 483 aaKnown RBP16.26■□□□□ 0.19
SRPRA-201ENST00000332118 UBE3CQ15386 1083 aa16.26■□□□□ 0.19
SRPRA-201ENST00000332118 GTF3C6Q969F1 213 aa16.26■□□□□ 0.19
SRPRA-201ENST00000332118 OSBP2Q969R2 916 aa16.26■□□□□ 0.19
SRPRA-201ENST00000332118 GRPEL1Q9HAV7 217 aa16.26■□□□□ 0.19
SRPRA-201ENST00000332118 CHD4Q14839 1912 aa16.26■□□□□ 0.19
SRPRA-201ENST00000332118 METTL24Q5JXM2 366 aa16.25■□□□□ 0.19
SRPRA-201ENST00000332118 LINC00116Q8NCU8 138 aa16.25■□□□□ 0.19
SRPRA-201ENST00000332118 SMARCC2Q8TAQ2 1214 aa16.25■□□□□ 0.19
SRPRA-201ENST00000332118 TCHHQ07283 1943 aa16.25■□□□□ 0.19
SRPRA-201ENST00000332118 TCRBV5S4A2TA0A5A2 114 aa16.25■□□□□ 0.19
SRPRA-201ENST00000332118 GJB2P29033 226 aa16.25■□□□□ 0.19
SRPRA-201ENST00000332118 ADD2P35612 726 aa16.25■□□□□ 0.19
SRPRA-201ENST00000332118 KCNJ4P48050 445 aa16.25■□□□□ 0.19
SRPRA-201ENST00000332118 SF3B3Q15393 1217 aaKnown RBP16.25■□□□□ 0.19
SRPRA-201ENST00000332118 ZSCAN25Q6NSZ9 544 aa16.25■□□□□ 0.19
SRPRA-201ENST00000332118 GAS2L3Q86XJ1 694 aa16.25■□□□□ 0.19
SRPRA-201ENST00000332118 ZNF652Q9Y2D9 606 aa16.25■□□□□ 0.19
SRPRA-201ENST00000332118 ATP6V1DQ9Y5K8 247 aa16.25■□□□□ 0.19
SRPRA-201ENST00000332118 DHX32Q7L7V1 743 aaKnown RBP16.25■□□□□ 0.19
SRPRA-201ENST00000332118 SALL1Q9NSC2 1324 aa16.24■□□□□ 0.19
SRPRA-201ENST00000332118 TAF7LQ5H9L4 462 aa16.24■□□□□ 0.19
SRPRA-201ENST00000332118 CARMIL3Q8ND23 1372 aa16.24■□□□□ 0.19
SRPRA-201ENST00000332118 PFKFB2O60825 505 aa16.24■□□□□ 0.19
SRPRA-201ENST00000332118 ZSCAN23Q3MJ62 389 aa16.24■□□□□ 0.19
SRPRA-201ENST00000332118 CCDC83Q8IWF9 413 aa16.24■□□□□ 0.19
SRPRA-201ENST00000332118 ZAP70P43403 619 aa16.23■□□□□ 0.19
SRPRA-201ENST00000332118 CCDC152Q4G0S7 254 aa16.23■□□□□ 0.19
SRPRA-201ENST00000332118 ACSBG1Q96GR2 724 aa16.23■□□□□ 0.19
SRPRA-201ENST00000332118 CTNNA3Q9UI47 895 aa16.23■□□□□ 0.19
SRPRA-201ENST00000332118 ZNF330Q9Y3S2 320 aaPredicted RBP16.23■□□□□ 0.19
SRPRA-201ENST00000332118 UBR3Q6ZT12 1888 aa16.23■□□□□ 0.19
SRPRA-201ENST00000332118 PRPF40AO75400 957 aaKnown RBP16.23■□□□□ 0.19
SRPRA-201ENST00000332118 PDCP20941 246 aa16.23■□□□□ 0.19
SRPRA-201ENST00000332118 ZNF804BA4D1E1 1349 aa16.23■□□□□ 0.19
SRPRA-201ENST00000332118 KCNQ2O43526 872 aa16.22■□□□□ 0.19
SRPRA-201ENST00000332118 CACNA1SQ13698 1873 aa16.22■□□□□ 0.19
SRPRA-201ENST00000332118 ELP1O95163 1332 aa16.22■□□□□ 0.19
SRPRA-201ENST00000332118 E7EWF7 191 aa16.22■□□□□ 0.19
SRPRA-201ENST00000332118 ALX1Q15699 326 aa16.22■□□□□ 0.19
SRPRA-201ENST00000332118 CCDC102BQ68D86 513 aa16.22■□□□□ 0.19
SRPRA-201ENST00000332118 NOL8Q76FK4 1167 aaKnown RBP16.22■□□□□ 0.19
SRPRA-201ENST00000332118 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.22■□□□□ 0.192e-6■■□□□ 11.7
SRPRA-201ENST00000332118 CNNM1Q9NRU3 951 aa16.22■□□□□ 0.19
SRPRA-201ENST00000332118 TNRC6CQ9HCJ0 1690 aaKnown RBP16.22■□□□□ 0.19
SRPRA-201ENST00000332118 ZNF274Q96GC6 653 aaPredicted RBP16.22■□□□□ 0.19
SRPRA-201ENST00000332118 PDS5AQ29RF7 1337 aaKnown RBP16.21■□□□□ 0.19
SRPRA-201ENST00000332118 DLEC1Q9Y238 1755 aa16.21■□□□□ 0.19
SRPRA-201ENST00000332118 NUTM2BA6NNL0 878 aaPredicted RBP16.21■□□□□ 0.19
SRPRA-201ENST00000332118 NUTM2EB1AL46 878 aaPredicted RBP16.21■□□□□ 0.19
SRPRA-201ENST00000332118 NUTM2AQ8IVF1 878 aaPredicted RBP16.21■□□□□ 0.19
SRPRA-201ENST00000332118 ECM29Q5VYK3 1845 aa16.2■□□□□ 0.18
SRPRA-201ENST00000332118 FAM98CQ17RN3 349 aaKnown RBP16.2■□□□□ 0.18
SRPRA-201ENST00000332118 CHMP4CQ96CF2 233 aa16.2■□□□□ 0.18
SRPRA-201ENST00000332118 BCL2L12Q9HB09 334 aa16.2■□□□□ 0.18
SRPRA-201ENST00000332118 NID2Q14112 1375 aa16.2■□□□□ 0.18
SRPRA-201ENST00000332118 Q6ZUG5 572 aa16.2■□□□□ 0.18
SRPRA-201ENST00000332118 TMEM63CQ9P1W3 806 aa16.2■□□□□ 0.18
SRPRA-201ENST00000332118 CDC5LQ99459 802 aaKnown RBP16.2■□□□□ 0.18
SRPRA-201ENST00000332118 MYH13Q9UKX3 1938 aa16.19■□□□□ 0.18
SRPRA-201ENST00000332118 RPS6KA4O75676 772 aa16.19■□□□□ 0.18
SRPRA-201ENST00000332118 SLC5A1P13866 664 aa16.19■□□□□ 0.18
SRPRA-201ENST00000332118 MB21D2Q8IYB1 491 aaPredicted RBP16.19■□□□□ 0.18
SRPRA-201ENST00000332118 PUS7LQ9H0K6 701 aaKnown RBP16.19■□□□□ 0.18
SRPRA-201ENST00000332118 NARFQ9UHQ1 456 aa16.19■□□□□ 0.18
SRPRA-201ENST00000332118 SLFNL1Q499Z3 407 aa16.19■□□□□ 0.18
SRPRA-201ENST00000332118 USP48Q86UV5 1035 aa16.19■□□□□ 0.18
SRPRA-201ENST00000332118 PIH1D3Q9NQM4 214 aaKnown RBP16.19■□□□□ 0.18
SRPRA-201ENST00000332118 NIP7Q9Y221 180 aaKnown RBP eCLIP16.19■□□□□ 0.18
SRPRA-201ENST00000332118 DUOX1Q9NRD9 1551 aa16.19■□□□□ 0.18
SRPRA-201ENST00000332118 FKBP4Q02790 459 aaKnown RBP eCLIP16.18■□□□□ 0.18
SRPRA-201ENST00000332118 CSPP1Q1MSJ5 1256 aa16.18■□□□□ 0.18
SRPRA-201ENST00000332118 GORABQ5T7V8 394 aa16.18■□□□□ 0.18
SRPRA-201ENST00000332118 NSFL1CQ9UNZ2 370 aaKnown RBP16.18■□□□□ 0.18
SRPRA-201ENST00000332118 LRRC37AA6NMS7 1700 aa16.18■□□□□ 0.18
SRPRA-201ENST00000332118 UBAP1LF5GYI3 381 aa16.18■□□□□ 0.18
SRPRA-201ENST00000332118 IGSF3O75054 1194 aa16.18■□□□□ 0.18
SRPRA-201ENST00000332118 PHKA1P46020 1223 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms