RNA–Protein interactions for RNA: ENST00000331587.8

CALCA-201, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best) BASIC

Gene CALCA, Length 843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-201ENST00000331587 CNNM1Q9NRU3 951 aa18.47■□□□□ 0.55
CALCA-201ENST00000331587 CNOT7Q9UIV1 285 aaKnown RBP18.47■□□□□ 0.55
CALCA-201ENST00000331587 CLEC11AQ9Y240 323 aa18.47■□□□□ 0.55
CALCA-201ENST00000331587 SAMD7Q7Z3H4 446 aa18.46■□□□□ 0.55
CALCA-201ENST00000331587 PASKQ96RG2 1323 aa18.46■□□□□ 0.55
CALCA-201ENST00000331587 G3V3G9 751 aa18.45■□□□□ 0.54
CALCA-201ENST00000331587 PTPN12Q05209 780 aaKnown RBP18.45■□□□□ 0.54
CALCA-201ENST00000331587 DCAF8Q5TAQ9 597 aa18.45■□□□□ 0.54
CALCA-201ENST00000331587 ZKSCAN2Q63HK3 967 aa18.45■□□□□ 0.54
CALCA-201ENST00000331587 PNMA8AQ86V59 439 aaPredicted RBP18.45■□□□□ 0.54
CALCA-201ENST00000331587 GMLQ99445 158 aa18.45■□□□□ 0.54
CALCA-201ENST00000331587 ADARB2Q9NS39 739 aaKnown RBP18.45■□□□□ 0.54
CALCA-201ENST00000331587 IPO8O15397 1037 aaKnown RBP18.44■□□□□ 0.54
CALCA-201ENST00000331587 KCNJ4P48050 445 aa18.44■□□□□ 0.54
CALCA-201ENST00000331587 APLP1P51693 650 aa18.44■□□□□ 0.54
CALCA-201ENST00000331587 DACT2Q5SW24 774 aa18.44■□□□□ 0.54
CALCA-201ENST00000331587 DLK2Q6UY11 383 aa18.44■□□□□ 0.54
CALCA-201ENST00000331587 USP50Q70EL3 339 aaPredicted RBP18.44■□□□□ 0.54
CALCA-201ENST00000331587 DNAJC5GQ8N7S2 189 aa18.44■□□□□ 0.54
CALCA-201ENST00000331587 VGLL2Q8N8G2 317 aa18.44■□□□□ 0.54
CALCA-201ENST00000331587 ZNF609O15014 1411 aa18.43■□□□□ 0.54
CALCA-201ENST00000331587 USP17L3A6NCW0 530 aa18.43■□□□□ 0.54
CALCA-201ENST00000331587 USP17L4A6NCW7 530 aa18.43■□□□□ 0.54
CALCA-201ENST00000331587 TBC1D10BQ4KMP7 808 aaPredicted RBP18.43■□□□□ 0.54
CALCA-201ENST00000331587 RSBN1LQ6PCB5 846 aaPredicted RBP18.43■□□□□ 0.54
CALCA-201ENST00000331587 C15orf52Q6ZUT6 534 aaKnown RBP18.43■□□□□ 0.54
CALCA-201ENST00000331587 USP17L1Q7RTZ2 530 aa18.43■□□□□ 0.54
CALCA-201ENST00000331587 ATG9AQ7Z3C6 839 aa18.43■□□□□ 0.54
CALCA-201ENST00000331587 PODNQ7Z5L7 613 aa18.43■□□□□ 0.54
CALCA-201ENST00000331587 CNTROBQ8N137 903 aa18.43■□□□□ 0.54
CALCA-201ENST00000331587 DPF2Q92785 391 aa18.43■□□□□ 0.54
CALCA-201ENST00000331587 COA1Q9GZY4 146 aa18.43■□□□□ 0.54
CALCA-201ENST00000331587 PA2G4Q9UQ80 394 aaKnown RBP18.43■□□□□ 0.54
CALCA-201ENST00000331587 ASTN2O75129 1339 aaPredicted RBP18.43■□□□□ 0.54
CALCA-201ENST00000331587 TRAF5O00463 557 aa18.42■□□□□ 0.54
CALCA-201ENST00000331587 FBXW7Q969H0 707 aa18.42■□□□□ 0.54
CALCA-201ENST00000331587 CD209Q9NNX6 404 aa18.42■□□□□ 0.54
CALCA-201ENST00000331587 POLR2AP24928 1970 aaKnown RBP18.41■□□□□ 0.54
CALCA-201ENST00000331587 GYG1P46976 350 aa18.41■□□□□ 0.54
CALCA-201ENST00000331587 RBM26Q5T8P6 1007 aaKnown RBP18.41■□□□□ 0.54
CALCA-201ENST00000331587 SIL1Q9H173 461 aa18.41■□□□□ 0.54
CALCA-201ENST00000331587 JAG2Q9Y219 1238 aa18.41■□□□□ 0.54
CALCA-201ENST00000331587 RPS12P25398 132 aaKnown RBP18.4■□□□□ 0.54
CALCA-201ENST00000331587 GTF2IP78347 998 aa18.4■□□□□ 0.54
CALCA-201ENST00000331587 METTL24Q5JXM2 366 aa18.4■□□□□ 0.54
CALCA-201ENST00000331587 CERS5Q8N5B7 392 aa18.4■□□□□ 0.54
CALCA-201ENST00000331587 PANK1Q8TE04 598 aa18.4■□□□□ 0.54
CALCA-201ENST00000331587 MROH5Q6ZUA9 1318 aa18.4■□□□□ 0.54
CALCA-201ENST00000331587 H7C1D1 291 aa18.39■□□□□ 0.53
CALCA-201ENST00000331587 EYA2O00167 538 aa18.39■□□□□ 0.53
CALCA-201ENST00000331587 UBE4AQ14139 1066 aa18.39■□□□□ 0.53
CALCA-201ENST00000331587 FAM84BQ96KN1 310 aaPredicted RBP18.39■□□□□ 0.53
CALCA-201ENST00000331587 GLIS2Q9BZE0 524 aaPredicted RBP18.39■□□□□ 0.53
CALCA-201ENST00000331587 PGAP2Q9UHJ9 254 aa18.39■□□□□ 0.53
CALCA-201ENST00000331587 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.39■□□□□ 0.53
CALCA-201ENST00000331587 TRPM7Q96QT4 1865 aa18.38■□□□□ 0.53
CALCA-201ENST00000331587 PDE8BO95263 885 aa18.38■□□□□ 0.53
CALCA-201ENST00000331587 GNAI3P08754 354 aa18.38■□□□□ 0.53
CALCA-201ENST00000331587 IL1R1P14778 569 aa18.38■□□□□ 0.53
CALCA-201ENST00000331587 ZNF280AP59817 542 aaPredicted RBP18.38■□□□□ 0.53
CALCA-201ENST00000331587 STRIP1Q5VSL9 837 aa18.38■□□□□ 0.53
CALCA-201ENST00000331587 DZIP1LQ8IYY4 767 aaKnown RBP18.38■□□□□ 0.53
CALCA-201ENST00000331587 AGBL3Q8NEM8 1001 aa18.38■□□□□ 0.53
CALCA-201ENST00000331587 C1orf115Q9H7X2 142 aa18.38■□□□□ 0.53
CALCA-201ENST00000331587 PNMA6EA0A0J9YXQ4 647 aa18.37■□□□□ 0.53
CALCA-201ENST00000331587 FGFR2P21802 821 aa18.37■□□□□ 0.53
CALCA-201ENST00000331587 KIF4BQ2VIQ3 1234 aa18.37■□□□□ 0.53
CALCA-201ENST00000331587 TTLL5Q6EMB2 1281 aa18.37■□□□□ 0.53
CALCA-201ENST00000331587 IQSEC3Q9UPP2 1182 aaPredicted RBP18.37■□□□□ 0.53
CALCA-201ENST00000331587 ARAP2Q8WZ64 1704 aa18.37■□□□□ 0.53
CALCA-201ENST00000331587 MTX1Q13505 466 aa18.36■□□□□ 0.53
CALCA-201ENST00000331587 ZNF804AQ7Z570 1209 aa18.36■□□□□ 0.53
CALCA-201ENST00000331587 SCAF8Q9UPN6 1271 aaKnown RBP18.36■□□□□ 0.53
CALCA-201ENST00000331587 PCDHAC2Q9Y5I4 1007 aa18.36■□□□□ 0.53
CALCA-201ENST00000331587 ZBTB7BO15156 539 aaPredicted RBP18.35■□□□□ 0.53
CALCA-201ENST00000331587 SRGAP3O43295 1099 aa18.35■□□□□ 0.53
CALCA-201ENST00000331587 USP17L8P0C7I0 530 aa18.35■□□□□ 0.53
CALCA-201ENST00000331587 CST9Q5W186 159 aa18.35■□□□□ 0.53
CALCA-201ENST00000331587 FBXO33Q7Z6M2 555 aa18.35■□□□□ 0.53
CALCA-201ENST00000331587 KIAA0825Q8IV33 1275 aa18.35■□□□□ 0.53
CALCA-201ENST00000331587 ITPRIPQ8IWB1 547 aa18.35■□□□□ 0.53
CALCA-201ENST00000331587 FTSJ3Q8IY81 847 aaKnown RBP18.35■□□□□ 0.53
CALCA-201ENST00000331587 TDRD7Q8NHU6 1098 aaKnown RBP18.35■□□□□ 0.53
CALCA-201ENST00000331587 COPRSQ9NQ92 184 aa18.35■□□□□ 0.53
CALCA-201ENST00000331587 RCAN3Q9UKA8 241 aa18.35■□□□□ 0.53
CALCA-201ENST00000331587 AOX1Q06278 1338 aa18.34■□□□□ 0.53
CALCA-201ENST00000331587 ADM5C9JUS6 153 aa18.34■□□□□ 0.53
CALCA-201ENST00000331587 GNAI2P04899 355 aa18.34■□□□□ 0.53
CALCA-201ENST00000331587 BCAMP50895 628 aa18.34■□□□□ 0.53
CALCA-201ENST00000331587 GRIK5Q16478 980 aa18.34■□□□□ 0.53
CALCA-201ENST00000331587 USP48Q86UV5 1035 aa18.34■□□□□ 0.53
CALCA-201ENST00000331587 YTHDC1Q96MU7 727 aaKnown RBP18.34■□□□□ 0.53
CALCA-201ENST00000331587 MYOZ2Q9NPC6 264 aa18.34■□□□□ 0.53
CALCA-201ENST00000331587 COL1A1P02452 1464 aaPredicted RBP18.33■□□□□ 0.53
CALCA-201ENST00000331587 CIAO1O76071 339 aa18.33■□□□□ 0.52
CALCA-201ENST00000331587 HIBADHP31937 336 aaKnown RBP18.33■□□□□ 0.52
CALCA-201ENST00000331587 SCARF1Q14162 830 aa18.33■□□□□ 0.52
CALCA-201ENST00000331587 NBPF9Q3BBW0 867 aa18.33■□□□□ 0.52
CALCA-201ENST00000331587 C20orf194Q5TEA3 1177 aa18.33■□□□□ 0.52
CALCA-201ENST00000331587 ZC3H15Q8WU90 426 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms