RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 HMG20BQ9P0W2 317 aa20.32■□□□□ 0.84
DDX41-201ENST00000330503 LIMCH1Q9UPQ0 1083 aa20.32■□□□□ 0.84
DDX41-201ENST00000330503 MAST3O60307 1309 aa20.31■□□□□ 0.84
DDX41-201ENST00000330503 M0R2C6 588 aa20.31■□□□□ 0.84
DDX41-201ENST00000330503 DEKP35659 375 aaKnown RBP20.31■□□□□ 0.84
DDX41-201ENST00000330503 ZDHHC9Q9Y397 364 aa20.31■□□□□ 0.84
DDX41-201ENST00000330503 C4BP0C0L5 1744 aa20.31■□□□□ 0.84
DDX41-201ENST00000330503 ARID4AP29374 1257 aaPredicted RBP20.3■□□□□ 0.84
DDX41-201ENST00000330503 CLEC17AQ6ZS10 378 aa20.3■□□□□ 0.84
DDX41-201ENST00000330503 FAM196AQ6ZSG2 479 aa20.3■□□□□ 0.84
DDX41-201ENST00000330503 PSMA5P28066 241 aa20.3■□□□□ 0.84
DDX41-201ENST00000330503 ARAP2Q8WZ64 1704 aa20.29■□□□□ 0.84
DDX41-201ENST00000330503 SLC5A1P13866 664 aa20.29■□□□□ 0.84
DDX41-201ENST00000330503 DSCC1Q9BVC3 393 aa20.29■□□□□ 0.84
DDX41-201ENST00000330503 BRWD3Q6RI45 1802 aa20.29■□□□□ 0.84
DDX41-201ENST00000330503 ZFYP08048 801 aaPredicted RBP20.29■□□□□ 0.84
DDX41-201ENST00000330503 UQCRFS1P1P0C7P4 283 aa20.29■□□□□ 0.84
DDX41-201ENST00000330503 CHRNDQ07001 517 aa20.29■□□□□ 0.84
DDX41-201ENST00000330503 TRAPPC3LQ5T215 181 aa20.29■□□□□ 0.84
DDX41-201ENST00000330503 KRT27Q7Z3Y8 459 aa20.29■□□□□ 0.84
DDX41-201ENST00000330503 CDC5LQ99459 802 aaKnown RBP20.29■□□□□ 0.84
DDX41-201ENST00000330503 NYXQ9GZU5 481 aa20.29■□□□□ 0.84
DDX41-201ENST00000330503 COL24A1Q17RW2 1714 aa20.28■□□□□ 0.84
DDX41-201ENST00000330503 CYP21A2P08686 494 aa20.28■□□□□ 0.84
DDX41-201ENST00000330503 HSPD1P10809 573 aaKnown RBP20.28■□□□□ 0.84
DDX41-201ENST00000330503 GTF2E1P29083 439 aaPredicted RBP20.28■□□□□ 0.84
DDX41-201ENST00000330503 LRRFIP1Q32MZ4 808 aaKnown RBP20.28■□□□□ 0.84
DDX41-201ENST00000330503 PIH1D3Q9NQM4 214 aaKnown RBP20.28■□□□□ 0.84
DDX41-201ENST00000330503 LARGE1O95461 756 aa20.27■□□□□ 0.84
DDX41-201ENST00000330503 RPS6KB1P23443 525 aa20.27■□□□□ 0.84
DDX41-201ENST00000330503 GBP4Q96PP9 640 aa20.27■□□□□ 0.84
DDX41-201ENST00000330503 ALDH8A1Q9H2A2 487 aaPredicted RBP20.27■□□□□ 0.84
DDX41-201ENST00000330503 CASZ1Q86V15 1759 aa20.27■□□□□ 0.84
DDX41-201ENST00000330503 TAF1P21675 1872 aa20.27■□□□□ 0.84
DDX41-201ENST00000330503 PHF14O94880 888 aa20.27■□□□□ 0.84
DDX41-201ENST00000330503 BLOC1S2Q6QNY1 142 aa20.27■□□□□ 0.84
DDX41-201ENST00000330503 NBPF5PQ86XG9 351 aaPredicted RBP20.27■□□□□ 0.84
DDX41-201ENST00000330503 RFC4P35249 363 aa20.26■□□□□ 0.83
DDX41-201ENST00000330503 ANKRD18AQ8IVF6 992 aa20.26■□□□□ 0.83
DDX41-201ENST00000330503 BAG4O95429 457 aaKnown RBP20.26■□□□□ 0.83
DDX41-201ENST00000330503 KRT32Q14532 448 aa20.26■□□□□ 0.83
DDX41-201ENST00000330503 WASHC4Q2M389 1173 aa20.26■□□□□ 0.83
DDX41-201ENST00000330503 TPTE2Q6XPS3 522 aa20.26■□□□□ 0.83
DDX41-201ENST00000330503 APPBP2Q92624 585 aa20.26■□□□□ 0.83
DDX41-201ENST00000330503 PUS7LQ9H0K6 701 aaKnown RBP20.26■□□□□ 0.83
DDX41-201ENST00000330503 BSDC1Q9NW68 430 aaPredicted RBP20.26■□□□□ 0.83
DDX41-201ENST00000330503 C4AP0C0L4 1744 aa20.25■□□□□ 0.83
DDX41-201ENST00000330503 A0A0G2JLW4 131 aa20.25■□□□□ 0.83
DDX41-201ENST00000330503 DDX11L8A8MPP1 907 aa20.25■□□□□ 0.83
DDX41-201ENST00000330503 FOXP2O15409 715 aa20.25■□□□□ 0.83
DDX41-201ENST00000330503 GSE1Q14687 1217 aa20.25■□□□□ 0.83
DDX41-201ENST00000330503 TTF1Q15361 905 aaPredicted RBP20.25■□□□□ 0.83
DDX41-201ENST00000330503 CCDC24Q8N4L8 307 aa20.25■□□□□ 0.83
DDX41-201ENST00000330503 ZSCAN31Q96LW9 406 aaPredicted RBP20.25■□□□□ 0.83
DDX41-201ENST00000330503 TRIM37O94972 964 aa20.24■□□□□ 0.83
DDX41-201ENST00000330503 ADD2P35612 726 aa20.24■□□□□ 0.83
DDX41-201ENST00000330503 BCAMP50895 628 aa20.24■□□□□ 0.83
DDX41-201ENST00000330503 STOX1Q6ZVD7 989 aa20.24■□□□□ 0.83
DDX41-201ENST00000330503 CELF1Q92879 486 aaKnown RBP20.24■□□□□ 0.83
DDX41-201ENST00000330503 TCEANC2Q96MN5 208 aa20.24■□□□□ 0.83
DDX41-201ENST00000330503 MYH7P12883 1935 aa20.24■□□□□ 0.83
DDX41-201ENST00000330503 WTIPA6NIX2 430 aaPredicted RBP20.24■□□□□ 0.83
DDX41-201ENST00000330503 ME3Q16798 604 aa20.24■□□□□ 0.83
DDX41-201ENST00000330503 SPATA5Q8NB90 893 aa20.24■□□□□ 0.83
DDX41-201ENST00000330503 NLRP3Q96P20 1036 aa20.24■□□□□ 0.83
DDX41-201ENST00000330503 TPCN1Q9ULQ1 816 aa20.24■□□□□ 0.83
DDX41-201ENST00000330503 MYO5AQ9Y4I1 1855 aaKnown RBP20.24■□□□□ 0.83
DDX41-201ENST00000330503 RASGRF1Q13972 1273 aa20.23■□□□□ 0.83
DDX41-201ENST00000330503 TOB2Q14106 344 aaPredicted RBP20.23■□□□□ 0.83
DDX41-201ENST00000330503 NEK1Q96PY6 1258 aa20.23■□□□□ 0.83
DDX41-201ENST00000330503 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.23■□□□□ 0.832e-6■■■□□ 17.2
DDX41-201ENST00000330503 MINPP1Q9UNW1 487 aa20.23■□□□□ 0.83
DDX41-201ENST00000330503 TRAK2O60296 914 aa20.23■□□□□ 0.83
DDX41-201ENST00000330503 BRD1O95696 1058 aa20.23■□□□□ 0.83
DDX41-201ENST00000330503 ST3GAL1Q11201 340 aa20.23■□□□□ 0.83
DDX41-201ENST00000330503 SLC9C2Q5TAH2 1124 aa20.23■□□□□ 0.83
DDX41-201ENST00000330503 ADRA2BP18089 450 aa20.22■□□□□ 0.83
DDX41-201ENST00000330503 TM4SF1P30408 202 aa20.22■□□□□ 0.83
DDX41-201ENST00000330503 NFIXQ14938 502 aa20.22■□□□□ 0.83
DDX41-201ENST00000330503 SLC27A3Q5K4L6 730 aa20.22■□□□□ 0.83
DDX41-201ENST00000330503 ZSCAN25Q6NSZ9 544 aa20.22■□□□□ 0.83
DDX41-201ENST00000330503 SH2B1Q9NRF2 756 aaPredicted RBP20.22■□□□□ 0.83
DDX41-201ENST00000330503 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.21■□□□□ 0.83
DDX41-201ENST00000330503 TTLL5Q6EMB2 1281 aa20.21■□□□□ 0.83
DDX41-201ENST00000330503 TCRBV5S4A2TA0A5A2 114 aa20.21■□□□□ 0.83
DDX41-201ENST00000330503 IDH1O75874 414 aaKnown RBP20.21■□□□□ 0.83
DDX41-201ENST00000330503 UBE3CQ15386 1083 aa20.21■□□□□ 0.83
DDX41-201ENST00000330503 PROM2Q8N271 834 aa20.21■□□□□ 0.83
DDX41-201ENST00000330503 WWC3Q9ULE0 1092 aa20.21■□□□□ 0.83
DDX41-201ENST00000330503 A0A1B0GUL6 1792 aa20.2■□□□□ 0.82
DDX41-201ENST00000330503 PDE6AP16499 860 aa20.2■□□□□ 0.82
DDX41-201ENST00000330503 RPS8P62241 208 aaKnown RBP20.2■□□□□ 0.82
DDX41-201ENST00000330503 ANKRD1Q15327 319 aa20.2■□□□□ 0.82
DDX41-201ENST00000330503 CCDC83Q8IWF9 413 aa20.2■□□□□ 0.82
DDX41-201ENST00000330503 UBR3Q6ZT12 1888 aa20.2■□□□□ 0.82
DDX41-201ENST00000330503 GPAA1O43292 621 aa20.2■□□□□ 0.82
DDX41-201ENST00000330503 UBE4AQ14139 1066 aa20.2■□□□□ 0.82
DDX41-201ENST00000330503 NECAB1Q8N987 351 aa20.2■□□□□ 0.82
DDX41-201ENST00000330503 ZNF532Q9HCE3 1301 aa20.2■□□□□ 0.82
DDX41-201ENST00000330503 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms