RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 TDRD7Q8NHU6 1098 aaKnown RBP18.07■□□□□ 0.48
BRCC3-201ENST00000330045 NAA16Q6N069 864 aaPredicted RBP18.07■□□□□ 0.48
BRCC3-201ENST00000330045 COL14A1Q05707 1796 aaKnown RBP18.07■□□□□ 0.48
BRCC3-201ENST00000330045 NUP188Q5SRE5 1749 aa18.06■□□□□ 0.48
BRCC3-201ENST00000330045 NBPF26B4DH59 902 aa18.06■□□□□ 0.48
BRCC3-201ENST00000330045 EXOSC10Q01780 885 aaKnown RBP18.06■□□□□ 0.48
BRCC3-201ENST00000330045 APOBRQ0VD83 1088 aa18.06■□□□□ 0.48
BRCC3-201ENST00000330045 ZMYM1Q5SVZ6 1142 aa18.06■□□□□ 0.48
BRCC3-201ENST00000330045 NBPF14Q5TI25 921 aa18.06■□□□□ 0.48
BRCC3-201ENST00000330045 NBPF10Q6P3W6 841 aaKnown RBP18.06■□□□□ 0.48
BRCC3-201ENST00000330045 TICAM2Q86XR7 235 aa18.06■□□□□ 0.48
BRCC3-201ENST00000330045 NBPF15Q8N660 670 aa18.06■□□□□ 0.48
BRCC3-201ENST00000330045 TRIM5Q9C035 493 aa18.06■□□□□ 0.48
BRCC3-201ENST00000330045 DNAJC25Q9H1X3 360 aa18.06■□□□□ 0.48
BRCC3-201ENST00000330045 CWC25Q9NXE8 425 aaPredicted RBP18.06■□□□□ 0.48
BRCC3-201ENST00000330045 TJP1Q07157 1748 aa18.06■□□□□ 0.48
BRCC3-201ENST00000330045 CTDNEP1O95476 244 aa18.06■□□□□ 0.48
BRCC3-201ENST00000330045 IL15P40933 162 aaPredicted RBP18.06■□□□□ 0.48
BRCC3-201ENST00000330045 CEBPZQ03701 1054 aaKnown RBP18.06■□□□□ 0.48
BRCC3-201ENST00000330045 PLA2G4DQ86XP0 818 aa18.06■□□□□ 0.48
BRCC3-201ENST00000330045 DRC7Q8IY82 874 aa18.06■□□□□ 0.48
BRCC3-201ENST00000330045 KIF3AQ9Y496 699 aa18.06■□□□□ 0.48
BRCC3-201ENST00000330045 PTPDC1A2A3K4 754 aa18.05■□□□□ 0.48
BRCC3-201ENST00000330045 ERVV-2B6SEH9 535 aa18.05■□□□□ 0.48
BRCC3-201ENST00000330045 ADD1P35611 737 aaKnown RBP18.05■□□□□ 0.48
BRCC3-201ENST00000330045 ZNF75DP51815 510 aa18.05■□□□□ 0.48
BRCC3-201ENST00000330045 CCDC186Q7Z3E2 898 aa18.05■□□□□ 0.48
BRCC3-201ENST00000330045 AGXT2Q9BYV1 514 aa18.05■□□□□ 0.48
BRCC3-201ENST00000330045 ASAP1Q9ULH1 1129 aa18.05■□□□□ 0.48
BRCC3-201ENST00000330045 UBAP1LF5GYI3 381 aa18.05■□□□□ 0.48
BRCC3-201ENST00000330045 CAVIN2O95810 425 aa18.05■□□□□ 0.48
BRCC3-201ENST00000330045 A1BGP04217 495 aa18.05■□□□□ 0.48
BRCC3-201ENST00000330045 TTLL7Q6ZT98 887 aa18.05■□□□□ 0.48
BRCC3-201ENST00000330045 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.05■□□□□ 0.48
BRCC3-201ENST00000330045 RCOR1Q9UKL0 485 aa18.05■□□□□ 0.48
BRCC3-201ENST00000330045 KAT6BQ8WYB5 2073 aa18.04■□□□□ 0.48
BRCC3-201ENST00000330045 DISP2A7MBM2 1401 aa18.04■□□□□ 0.48
BRCC3-201ENST00000330045 HSPD1P10809 573 aaKnown RBP18.04■□□□□ 0.48
BRCC3-201ENST00000330045 CHAF1AQ13111 956 aaPredicted RBP18.04■□□□□ 0.48
BRCC3-201ENST00000330045 PIGBQ92521 554 aa18.04■□□□□ 0.48
BRCC3-201ENST00000330045 TSC1Q92574 1164 aa18.04■□□□□ 0.48
BRCC3-201ENST00000330045 KCPQ6ZWJ8 1503 aa18.04■□□□□ 0.48
BRCC3-201ENST00000330045 MYH15Q9Y2K3 1946 aa18.04■□□□□ 0.48
BRCC3-201ENST00000330045 UBR2Q8IWV8 1755 aa18.04■□□□□ 0.48
BRCC3-201ENST00000330045 E7EWF7 191 aa18.04■□□□□ 0.48
BRCC3-201ENST00000330045 IFIT1P09914 478 aaKnown RBP18.04■□□□□ 0.48
BRCC3-201ENST00000330045 FOSBP53539 338 aa18.04■□□□□ 0.48
BRCC3-201ENST00000330045 CCT2P78371 535 aaKnown RBP18.04■□□□□ 0.48
BRCC3-201ENST00000330045 TOM1O60784 492 aa18.03■□□□□ 0.48
BRCC3-201ENST00000330045 LRRC24Q50LG9 513 aa18.03■□□□□ 0.48
BRCC3-201ENST00000330045 EYA2O00167 538 aa18.03■□□□□ 0.48
BRCC3-201ENST00000330045 CCAR1Q8IX12 1150 aaKnown RBP18.03■□□□□ 0.48
BRCC3-201ENST00000330045 ZMYND15Q9H091 742 aa18.03■□□□□ 0.48
BRCC3-201ENST00000330045 NRBP1Q9UHY1 535 aa18.03■□□□□ 0.48
BRCC3-201ENST00000330045 A0A0G2JLW4 131 aa18.02■□□□□ 0.48
BRCC3-201ENST00000330045 CTAGE5O15320 804 aa18.02■□□□□ 0.48
BRCC3-201ENST00000330045 RNF113AO15541 343 aaKnown RBP18.02■□□□□ 0.48
BRCC3-201ENST00000330045 ZNF594Q96JF6 807 aaPredicted RBP18.02■□□□□ 0.48
BRCC3-201ENST00000330045 NAP1L2Q9ULW6 460 aaPredicted RBP18.02■□□□□ 0.48
BRCC3-201ENST00000330045 MAST3O60307 1309 aa18.02■□□□□ 0.48
BRCC3-201ENST00000330045 A0A1B0GUL7 405 aa18.01■□□□□ 0.47
BRCC3-201ENST00000330045 ATL3Q6DD88 541 aa18.01■□□□□ 0.47
BRCC3-201ENST00000330045 ZNF710Q8N1W2 664 aa18.01■□□□□ 0.47
BRCC3-201ENST00000330045 ZNF274Q96GC6 653 aaPredicted RBP18.01■□□□□ 0.47
BRCC3-201ENST00000330045 ZNF396Q96N95 335 aaPredicted RBP18.01■□□□□ 0.47
BRCC3-201ENST00000330045 FTOQ9C0B1 505 aaKnown RBP eCLIP18.01■□□□□ 0.47
BRCC3-201ENST00000330045 NCOA5Q9HCD5 579 aaKnown RBP18.01■□□□□ 0.47
BRCC3-201ENST00000330045 TMOD3Q9NYL9 352 aa18.01■□□□□ 0.47
BRCC3-201ENST00000330045 PLCH1Q4KWH8 1693 aa18.01■□□□□ 0.47
BRCC3-201ENST00000330045 SPEF2Q9C093 1822 aa18.01■□□□□ 0.47
BRCC3-201ENST00000330045 PDIA3P30101 505 aaKnown RBP18.01■□□□□ 0.47
BRCC3-201ENST00000330045 CCDC191Q8NCU4 936 aa18.01■□□□□ 0.47
BRCC3-201ENST00000330045 USP28Q96RU2 1077 aa18.01■□□□□ 0.47
BRCC3-201ENST00000330045 SALL1Q9NSC2 1324 aa18.01■□□□□ 0.47
BRCC3-201ENST00000330045 LRMPQ12912 555 aa18■□□□□ 0.47
BRCC3-201ENST00000330045 ATG3Q9NT62 314 aa18■□□□□ 0.47
BRCC3-201ENST00000330045 GOLGA6L19H0YKK7 550 aa18■□□□□ 0.47
BRCC3-201ENST00000330045 CIAO1O76071 339 aa18■□□□□ 0.47
BRCC3-201ENST00000330045 IQCB1Q15051 598 aa18■□□□□ 0.47
BRCC3-201ENST00000330045 ZSCAN25Q6NSZ9 544 aa18■□□□□ 0.47
BRCC3-201ENST00000330045 CCDC73Q6ZRK6 1079 aa18■□□□□ 0.47
BRCC3-201ENST00000330045 CHST3Q7LGC8 479 aa18■□□□□ 0.47
BRCC3-201ENST00000330045 SYTL4Q96C24 671 aaPredicted RBP18■□□□□ 0.47
BRCC3-201ENST00000330045 CHMP4CQ96CF2 233 aa18■□□□□ 0.47
BRCC3-201ENST00000330045 ARID3AQ99856 593 aa18■□□□□ 0.47
BRCC3-201ENST00000330045 GOLPH3LQ9H4A5 285 aa18■□□□□ 0.47
BRCC3-201ENST00000330045 ZBTB3Q9H5J0 574 aa18■□□□□ 0.47
BRCC3-201ENST00000330045 CLIP2Q9UDT6 1046 aa18■□□□□ 0.47
BRCC3-201ENST00000330045 RIOK3O14730 519 aaKnown RBP17.99■□□□□ 0.47
BRCC3-201ENST00000330045 PAPPAQ13219 1627 aa17.99■□□□□ 0.47
BRCC3-201ENST00000330045 SNW1Q13573 536 aaKnown RBP17.99■□□□□ 0.47
BRCC3-201ENST00000330045 STX1AQ16623 288 aa17.99■□□□□ 0.47
BRCC3-201ENST00000330045 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.99■□□□□ 0.47
BRCC3-201ENST00000330045 FAM177BA6PVY3 158 aa17.98■□□□□ 0.47
BRCC3-201ENST00000330045 M0R2C6 588 aa17.98■□□□□ 0.47
BRCC3-201ENST00000330045 CDC25BP30305 580 aa17.98■□□□□ 0.47
BRCC3-201ENST00000330045 C11orf57Q6ZUT1 292 aaPredicted RBP17.98■□□□□ 0.47
BRCC3-201ENST00000330045 PUS3Q9BZE2 481 aaKnown RBP17.98■□□□□ 0.47
BRCC3-201ENST00000330045 BCL2L12Q9HB09 334 aa17.98■□□□□ 0.47
BRCC3-201ENST00000330045 TNS2Q63HR2 1409 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms