RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 TXLNBQ8N3L3 684 aa13.11□□□□□ -0.31
GINS3-202ENST00000328514 LINS1Q8NG48 757 aa13.11□□□□□ -0.31
GINS3-202ENST00000328514 XPO4Q9C0E2 1151 aaKnown RBP13.11□□□□□ -0.31
GINS3-202ENST00000328514 MAP3K2Q9Y2U5 619 aa13.11□□□□□ -0.31
GINS3-202ENST00000328514 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.11□□□□□ -0.31
GINS3-202ENST00000328514 LMO7Q8WWI1 1683 aa13.11□□□□□ -0.31
GINS3-202ENST00000328514 GRM8O00222 908 aa13.11□□□□□ -0.31
GINS3-202ENST00000328514 IKBKBO14920 756 aa13.11□□□□□ -0.31
GINS3-202ENST00000328514 CTDNEP1O95476 244 aa13.11□□□□□ -0.31
GINS3-202ENST00000328514 PSME1Q06323 249 aa13.11□□□□□ -0.31
GINS3-202ENST00000328514 CCDC158Q5M9N0 1113 aa13.11□□□□□ -0.31
GINS3-202ENST00000328514 TRIM65Q6PJ69 517 aa13.11□□□□□ -0.31
GINS3-202ENST00000328514 LRRN4CLQ8ND94 238 aa13.11□□□□□ -0.31
GINS3-202ENST00000328514 UBXN4Q92575 508 aa13.11□□□□□ -0.31
GINS3-202ENST00000328514 CCDC8Q9H0W5 538 aaPredicted RBP13.11□□□□□ -0.31
GINS3-202ENST00000328514 BOLA2Q9H3K6 86 aa13.11□□□□□ -0.31
GINS3-202ENST00000328514 TMX1Q9H3N1 280 aa13.11□□□□□ -0.31
GINS3-202ENST00000328514 TLR7Q9NYK1 1049 aaKnown RBP13.11□□□□□ -0.31
GINS3-202ENST00000328514 UBR1Q8IWV7 1749 aa13.11□□□□□ -0.31
GINS3-202ENST00000328514 CYP21A2P08686 494 aa13.1□□□□□ -0.31
GINS3-202ENST00000328514 NCAPHQ15003 741 aa13.1□□□□□ -0.31
GINS3-202ENST00000328514 LRRFIP1Q32MZ4 808 aaKnown RBP13.1□□□□□ -0.31
GINS3-202ENST00000328514 IPO4Q8TEX9 1081 aaKnown RBP13.1□□□□□ -0.31
GINS3-202ENST00000328514 ESF1Q9H501 851 aaKnown RBP13.1□□□□□ -0.31
GINS3-202ENST00000328514 DNAI1Q9UI46 699 aa13.1□□□□□ -0.31
GINS3-202ENST00000328514 PTPDC1A2A3K4 754 aa13.09□□□□□ -0.31
GINS3-202ENST00000328514 ME1P48163 572 aa13.09□□□□□ -0.31
GINS3-202ENST00000328514 DHX32Q7L7V1 743 aaKnown RBP13.09□□□□□ -0.31
GINS3-202ENST00000328514 TMC6Q7Z403 805 aa13.09□□□□□ -0.31
GINS3-202ENST00000328514 FBXL16Q8N461 479 aa13.09□□□□□ -0.31
GINS3-202ENST00000328514 RGS22Q8NE09 1264 aa13.09□□□□□ -0.31
GINS3-202ENST00000328514 SUCLG2Q96I99 432 aa13.09□□□□□ -0.31
GINS3-202ENST00000328514 IFNKQ9P0W0 207 aa13.09□□□□□ -0.31
GINS3-202ENST00000328514 PCDHA7Q9UN72 937 aa13.09□□□□□ -0.31
GINS3-202ENST00000328514 ANKARQ7Z5J8 1434 aa13.09□□□□□ -0.31
GINS3-202ENST00000328514 MYO1BO43795 1136 aa13.09□□□□□ -0.31
GINS3-202ENST00000328514 HSP90B1P14625 803 aaKnown RBP13.09□□□□□ -0.31
GINS3-202ENST00000328514 NLRP12P59046 1061 aa13.09□□□□□ -0.31
GINS3-202ENST00000328514 EXOSC10Q01780 885 aaKnown RBP13.09□□□□□ -0.31
GINS3-202ENST00000328514 CEBPZQ03701 1054 aaKnown RBP13.09□□□□□ -0.31
GINS3-202ENST00000328514 DPCR1Q3MIW9 517 aa13.09□□□□□ -0.31
GINS3-202ENST00000328514 FTOQ9C0B1 505 aaKnown RBP eCLIP13.09□□□□□ -0.31
GINS3-202ENST00000328514 BICC1Q9H694 974 aaKnown RBP13.09□□□□□ -0.31
GINS3-202ENST00000328514 YEATS4O95619 227 aa13.08□□□□□ -0.32
GINS3-202ENST00000328514 KCNG4Q8TDN1 519 aa13.08□□□□□ -0.32
GINS3-202ENST00000328514 ZNF274Q96GC6 653 aaPredicted RBP13.08□□□□□ -0.32
GINS3-202ENST00000328514 SDF4Q9BRK5 362 aa13.08□□□□□ -0.32
GINS3-202ENST00000328514 ZNF609O15014 1411 aa13.08□□□□□ -0.32
GINS3-202ENST00000328514 SMC2O95347 1197 aa13.07□□□□□ -0.32
GINS3-202ENST00000328514 EVCP57679 992 aa13.07□□□□□ -0.32
GINS3-202ENST00000328514 NLRP6P59044 892 aa13.07□□□□□ -0.32
GINS3-202ENST00000328514 MCMDC2Q4G0Z9 681 aa13.07□□□□□ -0.32
GINS3-202ENST00000328514 LINC00301Q8NCQ3 95 aa13.07□□□□□ -0.32
GINS3-202ENST00000328514 NGDNQ8NEJ9 315 aaKnown RBP13.07□□□□□ -0.32
GINS3-202ENST00000328514 MPHOSPH8Q99549 860 aa13.07□□□□□ -0.32
GINS3-202ENST00000328514 LGR6Q9HBX8 967 aa13.07□□□□□ -0.32
GINS3-202ENST00000328514 POLR3EQ9NVU0 708 aa13.07□□□□□ -0.32
GINS3-202ENST00000328514 PSD3Q9NYI0 1048 aa13.07□□□□□ -0.32
GINS3-202ENST00000328514 FEZ2Q9UHY8 353 aaPredicted RBP13.07□□□□□ -0.32
GINS3-202ENST00000328514 PARP3Q9Y6F1 533 aa13.07□□□□□ -0.32
GINS3-202ENST00000328514 SH3TC1Q8TE82 1336 aa13.07□□□□□ -0.32
GINS3-202ENST00000328514 TNRQ92752 1358 aa13.07□□□□□ -0.32
GINS3-202ENST00000328514 NPHP1O15259 732 aa13.07□□□□□ -0.32
GINS3-202ENST00000328514 KCNQ3O43525 872 aa13.07□□□□□ -0.32
GINS3-202ENST00000328514 TBC1D8O95759 1140 aa13.07□□□□□ -0.32
GINS3-202ENST00000328514 NDUFA8P51970 172 aa13.07□□□□□ -0.32
GINS3-202ENST00000328514 RAD51AP2Q09MP3 1159 aa13.07□□□□□ -0.32
GINS3-202ENST00000328514 GPS2Q13227 327 aa13.07□□□□□ -0.32
GINS3-202ENST00000328514 CWF19L2Q2TBE0 894 aaKnown RBP13.07□□□□□ -0.32
GINS3-202ENST00000328514 STOX1Q6ZVD7 989 aa13.07□□□□□ -0.32
GINS3-202ENST00000328514 REXO1L1PQ8IX06 675 aa13.07□□□□□ -0.32
GINS3-202ENST00000328514 GPR161Q8N6U8 529 aaKnown RBP13.07□□□□□ -0.32
GINS3-202ENST00000328514 BCL11BQ9C0K0 894 aaPredicted RBP13.07□□□□□ -0.32
GINS3-202ENST00000328514 COPRSQ9NQ92 184 aa13.07□□□□□ -0.32
GINS3-202ENST00000328514 NAP1L2Q9ULW6 460 aaPredicted RBP13.07□□□□□ -0.32
GINS3-202ENST00000328514 LAMA4Q16363 1823 aa13.06□□□□□ -0.32
GINS3-202ENST00000328514 A0A087WWV3 80 aa13.06□□□□□ -0.32
GINS3-202ENST00000328514 GOLGA6L9A6NEM1 432 aa13.06□□□□□ -0.32
GINS3-202ENST00000328514 BTBD11A6QL63 1104 aa13.06□□□□□ -0.32
GINS3-202ENST00000328514 ANXA1P04083 346 aa13.06□□□□□ -0.32
GINS3-202ENST00000328514 ZRSR1Q15695 479 aaKnown RBP13.06□□□□□ -0.32
GINS3-202ENST00000328514 AKAP4Q5JQC9 854 aa13.06□□□□□ -0.32
GINS3-202ENST00000328514 HOMER1Q86YM7 354 aa13.06□□□□□ -0.32
GINS3-202ENST00000328514 MNS1Q8NEH6 495 aa13.06□□□□□ -0.32
GINS3-202ENST00000328514 HSD3B7Q9H2F3 369 aa13.06□□□□□ -0.32
GINS3-202ENST00000328514 CARMIL3Q8ND23 1372 aa13.06□□□□□ -0.32
GINS3-202ENST00000328514 FANCGO15287 622 aa13.05□□□□□ -0.32
GINS3-202ENST00000328514 ZSCAN12O43309 604 aa13.05□□□□□ -0.32
GINS3-202ENST00000328514 CBFA2T2O43439 604 aa13.05□□□□□ -0.32
GINS3-202ENST00000328514 FANCCQ00597 558 aa13.05□□□□□ -0.32
GINS3-202ENST00000328514 CC2D1AQ6P1N0 951 aaPredicted RBP13.05□□□□□ -0.32
GINS3-202ENST00000328514 DSCC1Q9BVC3 393 aa13.05□□□□□ -0.32
GINS3-202ENST00000328514 DDX58O95786 925 aaKnown RBP13.05□□□□□ -0.32
GINS3-202ENST00000328514 SLC3A2P08195 630 aaKnown RBP13.05□□□□□ -0.32
GINS3-202ENST00000328514 MAP3K9P80192 1104 aa13.05□□□□□ -0.32
GINS3-202ENST00000328514 TEFQ10587 303 aa13.05□□□□□ -0.32
GINS3-202ENST00000328514 PROSER3Q2NL68 480 aa13.05□□□□□ -0.32
GINS3-202ENST00000328514 RSRC2Q7L4I2 434 aaKnown RBP13.05□□□□□ -0.32
GINS3-202ENST00000328514 MSL3Q8N5Y2 521 aaKnown RBP13.05□□□□□ -0.32
GINS3-202ENST00000328514 HAUS7Q99871 368 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms