RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 CCT2P78371 535 aaKnown RBP13.13□□□□□ -0.31
COL4A5-201ENST00000328300 BRAPQ7Z569 592 aa13.13□□□□□ -0.31
COL4A5-201ENST00000328300 CWC15Q9P013 229 aaKnown RBP13.13□□□□□ -0.31
COL4A5-201ENST00000328300 NCAPD2Q15021 1401 aa13.13□□□□□ -0.31
COL4A5-201ENST00000328300 GCKRQ14397 625 aa13.13□□□□□ -0.31
COL4A5-201ENST00000328300 CCDC112Q8NEF3 446 aa13.13□□□□□ -0.31
COL4A5-201ENST00000328300 TMEM87BQ96K49 555 aa13.13□□□□□ -0.31
COL4A5-201ENST00000328300 PRC1O43663 620 aa13.13□□□□□ -0.31
COL4A5-201ENST00000328300 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.13□□□□□ -0.31
COL4A5-201ENST00000328300 LPIN2Q92539 896 aa13.13□□□□□ -0.31
COL4A5-201ENST00000328300 TAF4BQ92750 862 aa13.13□□□□□ -0.31
COL4A5-201ENST00000328300 CDC42BPGQ6DT37 1551 aa13.13□□□□□ -0.31
COL4A5-201ENST00000328300 USP19O94966 1318 aa13.13□□□□□ -0.31
COL4A5-201ENST00000328300 GOLGA6L9A6NEM1 432 aa13.12□□□□□ -0.31
COL4A5-201ENST00000328300 USP37Q86T82 979 aa13.12□□□□□ -0.31
COL4A5-201ENST00000328300 CALRP27797 417 aaKnown RBP13.12□□□□□ -0.31
COL4A5-201ENST00000328300 SPAG1Q07617 926 aa13.12□□□□□ -0.31
COL4A5-201ENST00000328300 USP21Q9UK80 565 aa13.12□□□□□ -0.31
COL4A5-201ENST00000328300 ERCC6L2Q5T890 1561 aa13.12□□□□□ -0.31
COL4A5-201ENST00000328300 RLBP1P12271 317 aa13.12□□□□□ -0.31
COL4A5-201ENST00000328300 ITGA6P23229 1130 aa13.12□□□□□ -0.31
COL4A5-201ENST00000328300 SPA17Q15506 151 aa13.12□□□□□ -0.31
COL4A5-201ENST00000328300 RNF123Q5XPI4 1314 aa13.12□□□□□ -0.31
COL4A5-201ENST00000328300 ROBO2Q9HCK4 1378 aa13.12□□□□□ -0.31
COL4A5-201ENST00000328300 RNF17Q9BXT8 1623 aaKnown RBP13.12□□□□□ -0.31
COL4A5-201ENST00000328300 TBC1D22AQ8WUA7 517 aa13.12□□□□□ -0.31
COL4A5-201ENST00000328300 PIBF1Q8WXW3 757 aa13.12□□□□□ -0.31
COL4A5-201ENST00000328300 ALG1Q9BT22 464 aa13.12□□□□□ -0.31
COL4A5-201ENST00000328300 SYCE3A1L190 88 aa13.12□□□□□ -0.31
COL4A5-201ENST00000328300 MATR3P43243 847 aaKnown RBP eCLIP13.12□□□□□ -0.31
COL4A5-201ENST00000328300 HAND2P61296 217 aa13.11□□□□□ -0.31
COL4A5-201ENST00000328300 STK24Q9Y6E0 443 aa13.11□□□□□ -0.31
COL4A5-201ENST00000328300 SSH2Q76I76 1423 aa13.11□□□□□ -0.31
COL4A5-201ENST00000328300 CREB3L3Q68CJ9 461 aa13.11□□□□□ -0.31
COL4A5-201ENST00000328300 ARHGEF25Q86VW2 580 aa13.11□□□□□ -0.31
COL4A5-201ENST00000328300 PA2G4Q9UQ80 394 aaKnown RBP13.11□□□□□ -0.31
COL4A5-201ENST00000328300 SETBP1Q9Y6X0 1596 aa13.11□□□□□ -0.31
COL4A5-201ENST00000328300 GNA11P29992 359 aa13.11□□□□□ -0.31
COL4A5-201ENST00000328300 RRP36Q96EU6 259 aaKnown RBP13.11□□□□□ -0.31
COL4A5-201ENST00000328300 HIBADHP31937 336 aaKnown RBP13.11□□□□□ -0.31
COL4A5-201ENST00000328300 TCIRG1Q13488 830 aa13.11□□□□□ -0.31
COL4A5-201ENST00000328300 Q6ZUG5 572 aa13.11□□□□□ -0.31
COL4A5-201ENST00000328300 LLPHQ9BRT6 129 aaKnown RBP13.11□□□□□ -0.31
COL4A5-201ENST00000328300 GGA1Q9UJY5 639 aa13.11□□□□□ -0.31
COL4A5-201ENST00000328300 YEATS4O95619 227 aa13.1□□□□□ -0.31
COL4A5-201ENST00000328300 ARHGAP29Q52LW3 1261 aa13.1□□□□□ -0.31
COL4A5-201ENST00000328300 RUFY3Q7L099 469 aa13.1□□□□□ -0.31
COL4A5-201ENST00000328300 SPC24Q8NBT2 197 aa13.1□□□□□ -0.31
COL4A5-201ENST00000328300 APPBP2Q92624 585 aa13.1□□□□□ -0.31
COL4A5-201ENST00000328300 THRAP3Q9Y2W1 955 aaKnown RBP13.1□□□□□ -0.31
COL4A5-201ENST00000328300 GBP3Q9H0R5 595 aa13.1□□□□□ -0.31
COL4A5-201ENST00000328300 STX8Q9UNK0 236 aa13.1□□□□□ -0.31
COL4A5-201ENST00000328300 SPHKAPQ2M3C7 1700 aa13.1□□□□□ -0.31
COL4A5-201ENST00000328300 ALDH1B1P30837 517 aa13.1□□□□□ -0.31
COL4A5-201ENST00000328300 RBM10P98175 930 aaKnown RBP13.1□□□□□ -0.31
COL4A5-201ENST00000328300 CTAGE1Q96RT6 745 aa13.1□□□□□ -0.31
COL4A5-201ENST00000328300 JARID2Q92833 1246 aaPredicted RBP13.1□□□□□ -0.31
COL4A5-201ENST00000328300 CCDC172P0C7W6 258 aa13.1□□□□□ -0.31
COL4A5-201ENST00000328300 TOP1P11387 765 aaKnown RBP13.1□□□□□ -0.31
COL4A5-201ENST00000328300 MCM3P25205 808 aa13.1□□□□□ -0.31
COL4A5-201ENST00000328300 LGR6Q9HBX8 967 aa13.1□□□□□ -0.31
COL4A5-201ENST00000328300 NSFL1CQ9UNZ2 370 aaKnown RBP13.1□□□□□ -0.31
COL4A5-201ENST00000328300 GIGYF1O75420 1035 aaPredicted RBP13.09□□□□□ -0.31
COL4A5-201ENST00000328300 MAGEB6Q8N7X4 407 aa13.09□□□□□ -0.31
COL4A5-201ENST00000328300 A0A1B0GUL7 405 aa13.09□□□□□ -0.31
COL4A5-201ENST00000328300 PPP1R2P41236 205 aa13.09□□□□□ -0.31
COL4A5-201ENST00000328300 KIAA1328Q86T90 577 aa13.09□□□□□ -0.31
COL4A5-201ENST00000328300 EIF3JO75822 258 aaKnown RBP13.09□□□□□ -0.31
COL4A5-201ENST00000328300 C8orf34Q49A92 452 aa13.09□□□□□ -0.31
COL4A5-201ENST00000328300 TMC4Q7Z404 712 aa13.09□□□□□ -0.31
COL4A5-201ENST00000328300 WDR17Q8IZU2 1322 aa13.09□□□□□ -0.31
COL4A5-201ENST00000328300 ZSCAN30Q86W11 494 aa13.09□□□□□ -0.31
COL4A5-201ENST00000328300 MRPS27Q92552 414 aaKnown RBP13.09□□□□□ -0.31
COL4A5-201ENST00000328300 ZNF219Q9P2Y4 722 aaPredicted RBP13.09□□□□□ -0.31
COL4A5-201ENST00000328300 CLTCL1P53675 1640 aa13.09□□□□□ -0.31
COL4A5-201ENST00000328300 TBCAO75347 108 aaKnown RBP13.08□□□□□ -0.31
COL4A5-201ENST00000328300 G2E3Q7L622 706 aa13.08□□□□□ -0.31
COL4A5-201ENST00000328300 ZNF496Q96IT1 587 aaPredicted RBP13.08□□□□□ -0.31
COL4A5-201ENST00000328300 GOLGA6L10A6NI86 522 aa13.08□□□□□ -0.32
COL4A5-201ENST00000328300 USO1O60763 962 aaKnown RBP13.08□□□□□ -0.32
COL4A5-201ENST00000328300 F13A1P00488 732 aa13.08□□□□□ -0.32
COL4A5-201ENST00000328300 KRT24Q2M2I5 525 aa13.08□□□□□ -0.32
COL4A5-201ENST00000328300 CACNA2D4Q7Z3S7 1137 aa13.08□□□□□ -0.32
COL4A5-201ENST00000328300 TICAM2Q86XR7 235 aa13.08□□□□□ -0.32
COL4A5-201ENST00000328300 LZTS2Q9BRK4 669 aa13.08□□□□□ -0.32
COL4A5-201ENST00000328300 AGLP35573 1532 aa13.08□□□□□ -0.32
COL4A5-201ENST00000328300 PRIM1P49642 420 aaKnown RBP13.08□□□□□ -0.32
COL4A5-201ENST00000328300 MCM9Q9NXL9 1143 aa13.08□□□□□ -0.32
COL4A5-201ENST00000328300 TSHZ3Q63HK5 1081 aa13.08□□□□□ -0.32
COL4A5-201ENST00000328300 TRPC5Q9UL62 973 aaPredicted RBP13.08□□□□□ -0.32
COL4A5-201ENST00000328300 PCCAP05165 728 aaPredicted RBP13.07□□□□□ -0.32
COL4A5-201ENST00000328300 TRIM75PA6NK02 468 aa13.07□□□□□ -0.32
COL4A5-201ENST00000328300 KBTBD3Q8NAB2 608 aa13.07□□□□□ -0.32
COL4A5-201ENST00000328300 USP26Q9BXU7 913 aa13.07□□□□□ -0.32
COL4A5-201ENST00000328300 TSPOAP1O95153 1857 aa13.07□□□□□ -0.32
COL4A5-201ENST00000328300 TUBB4AP04350 444 aa13.07□□□□□ -0.32
COL4A5-201ENST00000328300 KRT2P35908 639 aa13.07□□□□□ -0.32
COL4A5-201ENST00000328300 TTLL5Q6EMB2 1281 aa13.07□□□□□ -0.32
COL4A5-201ENST00000328300 PLEKHF1Q96S99 279 aa13.07□□□□□ -0.32
COL4A5-201ENST00000328300 GPR108Q9NPR9 543 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 1018.2 ms