RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 AMIGO3Q86WK7 504 aa17.89■□□□□ 0.45
TPM3-205ENST00000328159 SETDB2Q96T68 719 aa17.89■□□□□ 0.45
TPM3-205ENST00000328159 MAST3O60307 1309 aa17.88■□□□□ 0.45
TPM3-205ENST00000328159 COL4A1P02462 1669 aa17.88■□□□□ 0.45
TPM3-205ENST00000328159 GTF2E1P29083 439 aaPredicted RBP17.88■□□□□ 0.45
TPM3-205ENST00000328159 ARID4AP29374 1257 aaPredicted RBP17.88■□□□□ 0.45
TPM3-205ENST00000328159 CCDC102BQ68D86 513 aa17.88■□□□□ 0.45
TPM3-205ENST00000328159 PI16Q6UXB8 463 aa17.88■□□□□ 0.45
TPM3-205ENST00000328159 FAM196AQ6ZSG2 479 aa17.88■□□□□ 0.45
TPM3-205ENST00000328159 C3orf67Q6ZVT6 689 aa17.88■□□□□ 0.45
TPM3-205ENST00000328159 GBP4Q96PP9 640 aa17.88■□□□□ 0.45
TPM3-205ENST00000328159 LIMCH1Q9UPQ0 1083 aa17.88■□□□□ 0.45
TPM3-205ENST00000328159 CYP2E1P05181 493 aaPredicted RBP17.87■□□□□ 0.45
TPM3-205ENST00000328159 PHKA1P46020 1223 aa17.87■□□□□ 0.45
TPM3-205ENST00000328159 KRT27Q7Z3Y8 459 aa17.87■□□□□ 0.45
TPM3-205ENST00000328159 DSCC1Q9BVC3 393 aa17.87■□□□□ 0.45
TPM3-205ENST00000328159 DDX11L8A8MPP1 907 aa17.86■□□□□ 0.45
TPM3-205ENST00000328159 TRAPPC3LQ5T215 181 aa17.86■□□□□ 0.45
TPM3-205ENST00000328159 LRRC4BQ9NT99 713 aa17.86■□□□□ 0.45
TPM3-205ENST00000328159 TAF6LQ9Y6J9 622 aa17.86■□□□□ 0.45
TPM3-205ENST00000328159 TAF1P21675 1872 aa17.86■□□□□ 0.45
TPM3-205ENST00000328159 A0A1B0GUL6 1792 aa17.86■□□□□ 0.45
TPM3-205ENST00000328159 M0R2C6 588 aa17.86■□□□□ 0.45
TPM3-205ENST00000328159 RFC4P35249 363 aa17.86■□□□□ 0.45
TPM3-205ENST00000328159 KRT32Q14532 448 aa17.86■□□□□ 0.45
TPM3-205ENST00000328159 NBPF5PQ86XG9 351 aaPredicted RBP17.86■□□□□ 0.45
TPM3-205ENST00000328159 ANKRD18AQ8IVF6 992 aa17.86■□□□□ 0.45
TPM3-205ENST00000328159 PHF14O94880 888 aa17.85■□□□□ 0.45
TPM3-205ENST00000328159 CHRNDQ07001 517 aa17.85■□□□□ 0.45
TPM3-205ENST00000328159 TTF1Q15361 905 aaPredicted RBP17.85■□□□□ 0.45
TPM3-205ENST00000328159 BLOC1S2Q6QNY1 142 aa17.85■□□□□ 0.45
TPM3-205ENST00000328159 CLEC17AQ6ZS10 378 aa17.85■□□□□ 0.45
TPM3-205ENST00000328159 OSBP2Q969R2 916 aa17.85■□□□□ 0.45
TPM3-205ENST00000328159 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.85■□□□□ 0.45
TPM3-205ENST00000328159 UBR3Q6ZT12 1888 aa17.84■□□□□ 0.45
TPM3-205ENST00000328159 MYO5AQ9Y4I1 1855 aaKnown RBP17.84■□□□□ 0.45
TPM3-205ENST00000328159 DEKP35659 375 aaKnown RBP17.84■□□□□ 0.45
TPM3-205ENST00000328159 WASHC4Q2M389 1173 aa17.84■□□□□ 0.45
TPM3-205ENST00000328159 ZSCAN25Q6NSZ9 544 aa17.84■□□□□ 0.45
TPM3-205ENST00000328159 ZSCAN31Q96LW9 406 aaPredicted RBP17.84■□□□□ 0.45
TPM3-205ENST00000328159 SNAP23O00161 211 aa17.84■□□□□ 0.45
TPM3-205ENST00000328159 RPS6KB1P23443 525 aa17.84■□□□□ 0.45
TPM3-205ENST00000328159 PKP1Q13835 747 aa17.84■□□□□ 0.45
TPM3-205ENST00000328159 TPTE2Q6XPS3 522 aa17.84■□□□□ 0.45
TPM3-205ENST00000328159 APPBP2Q92624 585 aa17.84■□□□□ 0.45
TPM3-205ENST00000328159 LARP6Q9BRS8 491 aaKnown RBP17.84■□□□□ 0.45
TPM3-205ENST00000328159 ALDH8A1Q9H2A2 487 aaPredicted RBP17.84■□□□□ 0.45
TPM3-205ENST00000328159 PIH1D3Q9NQM4 214 aaKnown RBP17.84■□□□□ 0.45
TPM3-205ENST00000328159 CYP21A2P08686 494 aa17.83■□□□□ 0.44
TPM3-205ENST00000328159 HSPD1P10809 573 aaKnown RBP17.83■□□□□ 0.44
TPM3-205ENST00000328159 ADRA2BP18089 450 aa17.83■□□□□ 0.44
TPM3-205ENST00000328159 SLC27A3Q5K4L6 730 aa17.83■□□□□ 0.44
TPM3-205ENST00000328159 NLRP3Q96P20 1036 aa17.83■□□□□ 0.44
TPM3-205ENST00000328159 BSDC1Q9NW68 430 aaPredicted RBP17.83■□□□□ 0.44
TPM3-205ENST00000328159 TRIM37O94972 964 aa17.82■□□□□ 0.44
TPM3-205ENST00000328159 ZDHHC9Q9Y397 364 aa17.82■□□□□ 0.44
TPM3-205ENST00000328159 LARGE1O95461 756 aa17.81■□□□□ 0.44
TPM3-205ENST00000328159 ADD2P35612 726 aa17.81■□□□□ 0.44
TPM3-205ENST00000328159 COL9A3Q14050 684 aaPredicted RBP17.81■□□□□ 0.44
TPM3-205ENST00000328159 GSE1Q14687 1217 aa17.81■□□□□ 0.44
TPM3-205ENST00000328159 ANKRD1Q15327 319 aa17.81■□□□□ 0.44
TPM3-205ENST00000328159 SPATA5Q8NB90 893 aa17.81■□□□□ 0.44
TPM3-205ENST00000328159 NEK1Q96PY6 1258 aa17.81■□□□□ 0.44
TPM3-205ENST00000328159 SH2B1Q9NRF2 756 aaPredicted RBP17.81■□□□□ 0.44
TPM3-205ENST00000328159 LAMA4Q16363 1823 aa17.81■□□□□ 0.44
TPM3-205ENST00000328159 DOCK2Q92608 1830 aa17.81■□□□□ 0.44
TPM3-205ENST00000328159 BAG4O95429 457 aaKnown RBP17.81■□□□□ 0.44
TPM3-205ENST00000328159 RASGRF1Q13972 1273 aa17.81■□□□□ 0.44
TPM3-205ENST00000328159 CELF1Q92879 486 aaKnown RBP17.81■□□□□ 0.44
TPM3-205ENST00000328159 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.8■□□□□ 0.44
TPM3-205ENST00000328159 PTMSP20962 102 aa17.8■□□□□ 0.44
TPM3-205ENST00000328159 SLC9C2Q5TAH2 1124 aa17.8■□□□□ 0.44
TPM3-205ENST00000328159 PUS7LQ9H0K6 701 aaKnown RBP17.8■□□□□ 0.44
TPM3-205ENST00000328159 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.8■□□□□ 0.44
TPM3-205ENST00000328159 CARMIL3Q8ND23 1372 aa17.8■□□□□ 0.44
TPM3-205ENST00000328159 TRAK2O60296 914 aa17.79■□□□□ 0.44
TPM3-205ENST00000328159 IDH1O75874 414 aaKnown RBP17.79■□□□□ 0.44
TPM3-205ENST00000328159 BCAMP50895 628 aa17.79■□□□□ 0.44
TPM3-205ENST00000328159 RBM6P78332 1123 aaKnown RBP17.79■□□□□ 0.44
TPM3-205ENST00000328159 UBE3CQ15386 1083 aa17.79■□□□□ 0.44
TPM3-205ENST00000328159 ZNF772Q68DY9 489 aaPredicted RBP17.79■□□□□ 0.44
TPM3-205ENST00000328159 CCDC24Q8N4L8 307 aa17.79■□□□□ 0.44
TPM3-205ENST00000328159 TPCN1Q9ULQ1 816 aa17.79■□□□□ 0.44
TPM3-205ENST00000328159 MINPP1Q9UNW1 487 aa17.79■□□□□ 0.44
TPM3-205ENST00000328159 TNRC6CQ9HCJ0 1690 aaKnown RBP17.79■□□□□ 0.44
TPM3-205ENST00000328159 BRD1O95696 1058 aa17.79■□□□□ 0.44
TPM3-205ENST00000328159 UBE4AQ14139 1066 aa17.79■□□□□ 0.44
TPM3-205ENST00000328159 NFIXQ14938 502 aa17.79■□□□□ 0.44
TPM3-205ENST00000328159 STOX1Q6ZVD7 989 aa17.79■□□□□ 0.44
TPM3-205ENST00000328159 TCEANC2Q96MN5 208 aa17.79■□□□□ 0.44
TPM3-205ENST00000328159 GOLGA6L22H0YM25 854 aa17.78■□□□□ 0.44
TPM3-205ENST00000328159 GPAA1O43292 621 aa17.78■□□□□ 0.44
TPM3-205ENST00000328159 PDE6AP16499 860 aa17.78■□□□□ 0.44
TPM3-205ENST00000328159 RPS8P62241 208 aaKnown RBP17.78■□□□□ 0.44
TPM3-205ENST00000328159 TOB2Q14106 344 aaPredicted RBP17.78■□□□□ 0.44
TPM3-205ENST00000328159 ME3Q16798 604 aa17.78■□□□□ 0.44
TPM3-205ENST00000328159 CCDC83Q8IWF9 413 aa17.78■□□□□ 0.44
TPM3-205ENST00000328159 CTNNA3Q9UI47 895 aa17.78■□□□□ 0.44
TPM3-205ENST00000328159 NPHP1O15259 732 aa17.77■□□□□ 0.44
TPM3-205ENST00000328159 FOXP2O15409 715 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms