RNA–Protein interactions for RNA: ENST00000327956.6

SCN5A-201, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-201ENST00000327956 EGFRP00533 1210 aa22.12■■□□□ 1.13
SCN5A-201ENST00000327956 LEMD3Q9Y2U8 911 aa22.12■■□□□ 1.13
SCN5A-201ENST00000327956 PSME4Q14997 1843 aa22.11■■□□□ 1.13
SCN5A-201ENST00000327956 ITGA6P23229 1130 aa22.11■■□□□ 1.13
SCN5A-201ENST00000327956 ZNF280AP59817 542 aaPredicted RBP22.11■■□□□ 1.13
SCN5A-201ENST00000327956 RGMBQ6NW40 437 aa22.11■■□□□ 1.13
SCN5A-201ENST00000327956 CCDC102AQ96A19 550 aa22.11■■□□□ 1.13
SCN5A-201ENST00000327956 PLA2G12BQ9BX93 195 aa22.11■■□□□ 1.13
SCN5A-201ENST00000327956 COA1Q9GZY4 146 aa22.11■■□□□ 1.13
SCN5A-201ENST00000327956 MYOZ2Q9NPC6 264 aa22.11■■□□□ 1.13
SCN5A-201ENST00000327956 EXOSC9Q06265 439 aaKnown RBP22.1■■□□□ 1.13
SCN5A-201ENST00000327956 SCARF1Q14162 830 aa22.1■■□□□ 1.13
SCN5A-201ENST00000327956 ANGEL2Q5VTE6 544 aaKnown RBP22.1■■□□□ 1.13
SCN5A-201ENST00000327956 ANKRD18BA2A2Z9 1011 aa22.09■■□□□ 1.13
SCN5A-201ENST00000327956 ZNF157P51786 506 aaPredicted RBP22.09■■□□□ 1.13
SCN5A-201ENST00000327956 FAM161AQ3B820 660 aa22.09■■□□□ 1.13
SCN5A-201ENST00000327956 CHMP3Q9Y3E7 222 aa22.09■■□□□ 1.13
SCN5A-201ENST00000327956 POLR2AP24928 1970 aaKnown RBP22.08■■□□□ 1.13
SCN5A-201ENST00000327956 ZNF804BA4D1E1 1349 aa22.08■■□□□ 1.13
SCN5A-201ENST00000327956 VAMP4O75379 141 aa22.08■■□□□ 1.13
SCN5A-201ENST00000327956 MMP14P50281 582 aa22.08■■□□□ 1.13
SCN5A-201ENST00000327956 FAM9BQ8IZU0 186 aa22.08■■□□□ 1.13
SCN5A-201ENST00000327956 CDCA5Q96FF9 252 aa22.08■■□□□ 1.13
SCN5A-201ENST00000327956 PITPNM2Q9BZ72 1349 aa22.07■■□□□ 1.12
SCN5A-201ENST00000327956 IFIT5Q13325 482 aaKnown RBP22.07■■□□□ 1.12
SCN5A-201ENST00000327956 STRIP1Q5VSL9 837 aa22.07■■□□□ 1.12
SCN5A-201ENST00000327956 TSKSQ9UJT2 592 aa22.07■■□□□ 1.12
SCN5A-201ENST00000327956 HDAC9Q9UKV0 1011 aa22.07■■□□□ 1.12
SCN5A-201ENST00000327956 FKBP1BP68106 108 aa22.06■■□□□ 1.12
SCN5A-201ENST00000327956 TAF7LQ5H9L4 462 aa22.06■■□□□ 1.12
SCN5A-201ENST00000327956 ABHD8Q96I13 439 aa22.06■■□□□ 1.12
SCN5A-201ENST00000327956 NF2P35240 595 aa22.05■■□□□ 1.12
SCN5A-201ENST00000327956 DLK2Q6UY11 383 aa22.05■■□□□ 1.12
SCN5A-201ENST00000327956 GMLQ99445 158 aa22.05■■□□□ 1.12
SCN5A-201ENST00000327956 CSF1RP07333 972 aa22.04■■□□□ 1.12
SCN5A-201ENST00000327956 CHRNDQ07001 517 aa22.03■■□□□ 1.12
SCN5A-201ENST00000327956 CCDC57Q2TAC2 916 aa22.03■■□□□ 1.12
SCN5A-201ENST00000327956 DACT2Q5SW24 774 aa22.03■■□□□ 1.12
SCN5A-201ENST00000327956 TTLL5Q6EMB2 1281 aa22.03■■□□□ 1.12
SCN5A-201ENST00000327956 REM2Q8IYK8 340 aaPredicted RBP22.03■■□□□ 1.12
SCN5A-201ENST00000327956 C9orf78Q9NZ63 289 aaPredicted RBP22.03■■□□□ 1.12
SCN5A-201ENST00000327956 ASTN2O75129 1339 aaPredicted RBP22.03■■□□□ 1.12
SCN5A-201ENST00000327956 F6X3S4 739 aa22.02■■□□□ 1.12
SCN5A-201ENST00000327956 CASP7P55210 303 aa22.02■■□□□ 1.12
SCN5A-201ENST00000327956 TTLL12Q14166 644 aaPredicted RBP22.02■■□□□ 1.12
SCN5A-201ENST00000327956 SLC4A10Q6U841 1118 aa22.01■■□□□ 1.11
SCN5A-201ENST00000327956 ZNF804AQ7Z570 1209 aa22.01■■□□□ 1.11
SCN5A-201ENST00000327956 SAGE1Q9NXZ1 904 aa22.01■■□□□ 1.11
SCN5A-201ENST00000327956 PAPPA2Q9BXP8 1791 aa22■■□□□ 1.11
SCN5A-201ENST00000327956 WTIPA6NIX2 430 aaPredicted RBP22■■□□□ 1.11
SCN5A-201ENST00000327956 SLC10A3P09131 477 aa22■■□□□ 1.11
SCN5A-201ENST00000327956 KIF23Q02241 960 aaPredicted RBP22■■□□□ 1.11
SCN5A-201ENST00000327956 BEND3Q5T5X7 828 aa22■■□□□ 1.11
SCN5A-201ENST00000327956 CCDC85CA6NKD9 419 aa21.99■■□□□ 1.11
SCN5A-201ENST00000327956 FAM155AB1AL88 458 aaPredicted RBP21.99■■□□□ 1.11
SCN5A-201ENST00000327956 GRM8O00222 908 aa21.99■■□□□ 1.11
SCN5A-201ENST00000327956 GTF2IP78347 998 aa21.99■■□□□ 1.11
SCN5A-201ENST00000327956 APOBEC3FQ8IUX4 373 aaKnown RBP21.99■■□□□ 1.11
SCN5A-201ENST00000327956 KIAA0825Q8IV33 1275 aa21.99■■□□□ 1.11
SCN5A-201ENST00000327956 SRCIN1Q9C0H9 1055 aa21.99■■□□□ 1.11
SCN5A-201ENST00000327956 CNNM1Q9NRU3 951 aa21.99■■□□□ 1.11
SCN5A-201ENST00000327956 ALDH1L1O75891 902 aa21.98■■□□□ 1.11
SCN5A-201ENST00000327956 NBPF9Q3BBW0 867 aa21.98■■□□□ 1.11
SCN5A-201ENST00000327956 LMBR1LQ6UX01 489 aa21.98■■□□□ 1.11
SCN5A-201ENST00000327956 TXNRD3Q86VQ6 643 aa21.98■■□□□ 1.11
SCN5A-201ENST00000327956 MXD3Q9BW11 206 aa21.98■■□□□ 1.11
SCN5A-201ENST00000327956 WNT10BO00744 389 aa21.97■■□□□ 1.11
SCN5A-201ENST00000327956 LDHAL6AQ6ZMR3 332 aa21.97■■□□□ 1.11
SCN5A-201ENST00000327956 AKAP11Q9UKA4 1901 aa21.96■■□□□ 1.11
SCN5A-201ENST00000327956 MYO1BO43795 1136 aa21.96■■□□□ 1.11
SCN5A-201ENST00000327956 SASH1O94885 1247 aa21.96■■□□□ 1.11
SCN5A-201ENST00000327956 KLRK1P26718 216 aa21.96■■□□□ 1.11
SCN5A-201ENST00000327956 FOXO4P98177 505 aa21.96■■□□□ 1.11
SCN5A-201ENST00000327956 DGKZQ13574 1117 aa21.96■■□□□ 1.11
SCN5A-201ENST00000327956 ZIC5Q96T25 663 aa21.96■■□□□ 1.11
SCN5A-201ENST00000327956 CD209Q9NNX6 404 aa21.96■■□□□ 1.11
SCN5A-201ENST00000327956 TAF5LO75529 589 aa21.95■■□□□ 1.1
SCN5A-201ENST00000327956 TRPA1O75762 1119 aa21.95■■□□□ 1.1
SCN5A-201ENST00000327956 DLGAP5Q15398 846 aa21.95■■□□□ 1.1
SCN5A-201ENST00000327956 HELBQ8NG08 1087 aaPredicted RBP21.95■■□□□ 1.1
SCN5A-201ENST00000327956 SPINK5Q9NQ38 1064 aaPredicted RBP21.95■■□□□ 1.1
SCN5A-201ENST00000327956 CASP8AP2Q9UKL3 1982 aa21.94■■□□□ 1.1
SCN5A-201ENST00000327956 PLIN1O60240 522 aa21.94■■□□□ 1.1
SCN5A-201ENST00000327956 C15orf52Q6ZUT6 534 aaKnown RBP21.94■■□□□ 1.1
SCN5A-201ENST00000327956 ARMC9Q7Z3E5 817 aa21.94■■□□□ 1.1
SCN5A-201ENST00000327956 RASAL3Q86YV0 1011 aa21.94■■□□□ 1.1
SCN5A-201ENST00000327956 MCOLN1Q9GZU1 580 aa21.94■■□□□ 1.1
SCN5A-201ENST00000327956 RNF186Q9NXI6 227 aa21.93■■□□□ 1.1
SCN5A-201ENST00000327956 SCAF8Q9UPN6 1271 aaKnown RBP21.93■■□□□ 1.1
SCN5A-201ENST00000327956 COL1A1P02452 1464 aaPredicted RBP21.91■■□□□ 1.1
SCN5A-201ENST00000327956 UBE2Q2LH0YL09 131 aa21.91■■□□□ 1.1
SCN5A-201ENST00000327956 PRAMEF18Q5VWM3 479 aa21.91■■□□□ 1.1
SCN5A-201ENST00000327956 CSRNP1Q96S65 589 aa21.91■■□□□ 1.1
SCN5A-201ENST00000327956 ZNF646O15015 1829 aaPredicted RBP21.9■■□□□ 1.1
SCN5A-201ENST00000327956 IL1R1P14778 569 aa21.9■■□□□ 1.1
SCN5A-201ENST00000327956 RBM5P52756 815 aaKnown RBP eCLIP21.9■■□□□ 1.1
SCN5A-201ENST00000327956 ZNF594Q96JF6 807 aaPredicted RBP21.9■■□□□ 1.1
SCN5A-201ENST00000327956 E9PSI1 815 aa21.89■■□□□ 1.09
SCN5A-201ENST00000327956 F8W031 263 aaPredicted RBP21.89■■□□□ 1.09
SCN5A-201ENST00000327956 FKBP1AP62942 108 aaKnown RBP21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms