RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 PLVAPQ9BX97 442 aa18.61■□□□□ 0.57
SMAD3-201ENST00000327367 TBCAO75347 108 aaKnown RBP18.61■□□□□ 0.57
SMAD3-201ENST00000327367 MRPS9P82933 396 aaKnown RBP18.61■□□□□ 0.57
SMAD3-201ENST00000327367 CAVIN4Q5BKX8 364 aa18.61■□□□□ 0.57
SMAD3-201ENST00000327367 CAPN7Q9Y6W3 813 aa18.61■□□□□ 0.57
SMAD3-201ENST00000327367 DTNBO60941 627 aa18.6■□□□□ 0.57
SMAD3-201ENST00000327367 WDR78Q5VTH9 848 aa18.6■□□□□ 0.57
SMAD3-201ENST00000327367 RPAINQ86UA6 219 aa18.6■□□□□ 0.57
SMAD3-201ENST00000327367 RBM8AQ9Y5S9 174 aaKnown RBP18.6■□□□□ 0.57
SMAD3-201ENST00000327367 PABPN1LA6NDY0 278 aaKnown RBP18.6■□□□□ 0.57
SMAD3-201ENST00000327367 CASQ2O14958 399 aaPredicted RBP18.6■□□□□ 0.57
SMAD3-201ENST00000327367 ZSCAN26Q16670 478 aa18.6■□□□□ 0.57
SMAD3-201ENST00000327367 MFSD6Q6ZSS7 791 aa18.6■□□□□ 0.57
SMAD3-201ENST00000327367 SUDS3Q9H7L9 328 aaPredicted RBP18.6■□□□□ 0.57
SMAD3-201ENST00000327367 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.6■□□□□ 0.57
SMAD3-201ENST00000327367 CCDC174Q6PII3 467 aa18.6■□□□□ 0.57
SMAD3-201ENST00000327367 SMC1BQ8NDV3 1235 aa18.6■□□□□ 0.57
SMAD3-201ENST00000327367 BCL2L12Q9HB09 334 aa18.6■□□□□ 0.57
SMAD3-201ENST00000327367 NKIRAS1Q9NYS0 192 aa18.6■□□□□ 0.57
SMAD3-201ENST00000327367 PSMB7Q99436 277 aa18.59■□□□□ 0.57
SMAD3-201ENST00000327367 ESYT1Q9BSJ8 1104 aa18.59■□□□□ 0.57
SMAD3-201ENST00000327367 ZNF287Q9HBT7 754 aa18.59■□□□□ 0.57
SMAD3-201ENST00000327367 LRRC43Q8N309 656 aa18.59■□□□□ 0.57
SMAD3-201ENST00000327367 KAT14Q9H8E8 782 aa18.59■□□□□ 0.57
SMAD3-201ENST00000327367 SPTLC2O15270 562 aa18.59■□□□□ 0.57
SMAD3-201ENST00000327367 PPP1R42Q7Z4L9 355 aa18.59■□□□□ 0.57
SMAD3-201ENST00000327367 HSPA1LP34931 641 aa18.59■□□□□ 0.57
SMAD3-201ENST00000327367 EPSTI1Q96J88 318 aa18.59■□□□□ 0.57
SMAD3-201ENST00000327367 MYCBPQ99417 103 aaPredicted RBP18.59■□□□□ 0.57
SMAD3-201ENST00000327367 RNF41Q9H4P4 317 aaPredicted RBP18.59■□□□□ 0.57
SMAD3-201ENST00000327367 SBNO2Q9Y2G9 1366 aa18.59■□□□□ 0.57
SMAD3-201ENST00000327367 MTRF1LQ9UGC7 380 aaKnown RBP18.59■□□□□ 0.57
SMAD3-201ENST00000327367 TSPY2A6NKD2 308 aa18.58■□□□□ 0.57
SMAD3-201ENST00000327367 ATP2A1O14983 1001 aa18.58■□□□□ 0.57
SMAD3-201ENST00000327367 TUBB4AP04350 444 aa18.58■□□□□ 0.57
SMAD3-201ENST00000327367 TNNC1P63316 161 aa18.58■□□□□ 0.57
SMAD3-201ENST00000327367 FMNL3Q8IVF7 1028 aa18.58■□□□□ 0.57
SMAD3-201ENST00000327367 KSR1Q8IVT5 923 aa18.58■□□□□ 0.57
SMAD3-201ENST00000327367 DDX21Q9NR30 783 aaKnown RBP eCLIP18.58■□□□□ 0.57
SMAD3-201ENST00000327367 TSNAXIP1Q2TAA8 658 aa18.58■□□□□ 0.57
SMAD3-201ENST00000327367 VCX3BQ9H321 246 aa18.58■□□□□ 0.57
SMAD3-201ENST00000327367 AKR1B15C9JRZ8 316 aaPredicted RBP18.58■□□□□ 0.56
SMAD3-201ENST00000327367 PSMA7O14818 248 aa18.58■□□□□ 0.56
SMAD3-201ENST00000327367 MCM7P33993 719 aa18.58■□□□□ 0.56
SMAD3-201ENST00000327367 AK2P54819 239 aa18.58■□□□□ 0.56
SMAD3-201ENST00000327367 SNX21Q969T3 373 aa18.58■□□□□ 0.56
SMAD3-201ENST00000327367 A0A1B0GVL5 298 aa18.58■□□□□ 0.56
SMAD3-201ENST00000327367 CCDC172P0C7W6 258 aa18.58■□□□□ 0.56
SMAD3-201ENST00000327367 NAPGQ99747 312 aaPredicted RBP18.58■□□□□ 0.56
SMAD3-201ENST00000327367 CTNND2Q9UQB3 1225 aa18.58■□□□□ 0.56
SMAD3-201ENST00000327367 MAP3K2Q9Y2U5 619 aa18.58■□□□□ 0.56
SMAD3-201ENST00000327367 USH1CQ9Y6N9 552 aa18.58■□□□□ 0.56
SMAD3-201ENST00000327367 FERMT1Q9BQL6 677 aa18.58■□□□□ 0.56
SMAD3-201ENST00000327367 SSX2IPQ9Y2D8 614 aa18.58■□□□□ 0.56
SMAD3-201ENST00000327367 RPGRIP1LQ68CZ1 1315 aa18.57■□□□□ 0.56
SMAD3-201ENST00000327367 MYCNP04198 464 aaPredicted RBP18.57■□□□□ 0.56
SMAD3-201ENST00000327367 CEP128Q6ZU80 1094 aa18.57■□□□□ 0.56
SMAD3-201ENST00000327367 LMBR1Q8WVP7 490 aa18.57■□□□□ 0.56
SMAD3-201ENST00000327367 DNAI2Q9GZS0 605 aa18.57■□□□□ 0.56
SMAD3-201ENST00000327367 IFIT5Q13325 482 aaKnown RBP18.57■□□□□ 0.56
SMAD3-201ENST00000327367 GSDMBQ8TAX9 411 aa18.57■□□□□ 0.56
SMAD3-201ENST00000327367 MGARPQ8TDB4 240 aa18.57■□□□□ 0.56
SMAD3-201ENST00000327367 MORC4Q8TE76 937 aa18.57■□□□□ 0.56
SMAD3-201ENST00000327367 PYM1Q9BRP8 204 aaKnown RBP18.57■□□□□ 0.56
SMAD3-201ENST00000327367 ANKIB1Q9P2G1 1089 aa18.57■□□□□ 0.56
SMAD3-201ENST00000327367 TNNQ9UQP3 1299 aa18.57■□□□□ 0.56
SMAD3-201ENST00000327367 NACADO15069 1562 aa18.57■□□□□ 0.56
SMAD3-201ENST00000327367 LIG3P49916 1009 aa18.57■□□□□ 0.56
SMAD3-201ENST00000327367 MCUR1Q96AQ8 359 aa18.57■□□□□ 0.56
SMAD3-201ENST00000327367 STAC3Q96MF2 364 aa18.57■□□□□ 0.56
SMAD3-201ENST00000327367 RIPOR2Q9Y4F9 1068 aa18.57■□□□□ 0.56
SMAD3-201ENST00000327367 CABS1Q96KC9 395 aa18.56■□□□□ 0.56
SMAD3-201ENST00000327367 PPANQ9NQ55 473 aaKnown RBP18.56■□□□□ 0.56
SMAD3-201ENST00000327367 C8orf74Q6P047 294 aa18.56■□□□□ 0.56
SMAD3-201ENST00000327367 HEATR3Q7Z4Q2 680 aa18.56■□□□□ 0.56
SMAD3-201ENST00000327367 GOLGA6BA6NDN3 693 aa18.56■□□□□ 0.56
SMAD3-201ENST00000327367 SETSIPP0DME0 302 aa18.56■□□□□ 0.56
SMAD3-201ENST00000327367 RAPGEF1Q13905 1077 aa18.56■□□□□ 0.56
SMAD3-201ENST00000327367 CCDC38Q502W7 563 aa18.56■□□□□ 0.56
SMAD3-201ENST00000327367 HMG20BQ9P0W2 317 aa18.56■□□□□ 0.56
SMAD3-201ENST00000327367 ATP6V0A2Q9Y487 856 aa18.56■□□□□ 0.56
SMAD3-201ENST00000327367 PTPRGP23470 1445 aa18.56■□□□□ 0.56
SMAD3-201ENST00000327367 FAM83GA6ND36 823 aa18.55■□□□□ 0.56
SMAD3-201ENST00000327367 SLC5A1P13866 664 aa18.55■□□□□ 0.56
SMAD3-201ENST00000327367 SPAG1Q07617 926 aa18.55■□□□□ 0.56
SMAD3-201ENST00000327367 PLS1Q14651 629 aa18.55■□□□□ 0.56
SMAD3-201ENST00000327367 VSIG1Q86XK7 387 aa18.55■□□□□ 0.56
SMAD3-201ENST00000327367 RXRAP19793 462 aa18.55■□□□□ 0.56
SMAD3-201ENST00000327367 ZBTB43O43298 467 aa18.55■□□□□ 0.56
SMAD3-201ENST00000327367 APOBRQ0VD83 1088 aa18.55■□□□□ 0.56
SMAD3-201ENST00000327367 STXBP4Q6ZWJ1 553 aa18.55■□□□□ 0.56
SMAD3-201ENST00000327367 TTC19Q6DKK2 380 aaPredicted RBP18.55■□□□□ 0.56
SMAD3-201ENST00000327367 WHAMMQ8TF30 809 aa18.55■□□□□ 0.56
SMAD3-201ENST00000327367 CFTRP13569 1480 aa18.55■□□□□ 0.56
SMAD3-201ENST00000327367 ATP5J2-PTCD1G3V325 749 aa18.55■□□□□ 0.56
SMAD3-201ENST00000327367 CCDC65Q8IXS2 484 aa18.55■□□□□ 0.56
SMAD3-201ENST00000327367 TBC1D31Q96DN5 1066 aa18.55■□□□□ 0.56
SMAD3-201ENST00000327367 GBP5Q96PP8 586 aa18.55■□□□□ 0.56
SMAD3-201ENST00000327367 VPS16Q9H269 839 aa18.55■□□□□ 0.56
SMAD3-201ENST00000327367 VCXQ9H320 206 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms