RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 FHOD1Q9Y613 1164 aa16.62■□□□□ 0.25
CHRNA3-201ENST00000326828 CFAP100Q494V2 611 aa16.62■□□□□ 0.25
CHRNA3-201ENST00000326828 HSP90AB3PQ58FF7 597 aa16.62■□□□□ 0.25
CHRNA3-201ENST00000326828 TEX35Q5T0J7 233 aa16.62■□□□□ 0.25
CHRNA3-201ENST00000326828 FAM208AQ9UK61 1670 aaKnown RBP16.61■□□□□ 0.25
CHRNA3-201ENST00000326828 MED23Q9ULK4 1368 aa16.61■□□□□ 0.25
CHRNA3-201ENST00000326828 SLC3A2P08195 630 aaKnown RBP16.61■□□□□ 0.25
CHRNA3-201ENST00000326828 PDIA4P13667 645 aaKnown RBP16.61■□□□□ 0.25
CHRNA3-201ENST00000326828 UBE3BQ7Z3V4 1068 aa16.61■□□□□ 0.25
CHRNA3-201ENST00000326828 LINS1Q8NG48 757 aa16.61■□□□□ 0.25
CHRNA3-201ENST00000326828 ALDH1L1O75891 902 aa16.61■□□□□ 0.25
CHRNA3-201ENST00000326828 ENGASEQ8NFI3 743 aa16.61■□□□□ 0.25
CHRNA3-201ENST00000326828 GIGYF1O75420 1035 aaPredicted RBP16.6■□□□□ 0.25
CHRNA3-201ENST00000326828 ST5P78524 1137 aa16.6■□□□□ 0.25
CHRNA3-201ENST00000326828 TRIM34Q9BYJ4 488 aa16.6■□□□□ 0.25
CHRNA3-201ENST00000326828 CALCOCO1Q9P1Z2 691 aa16.6■□□□□ 0.25
CHRNA3-201ENST00000326828 IGKV5-2P06315 115 aa16.6■□□□□ 0.25
CHRNA3-201ENST00000326828 PLA2G4AP47712 749 aa16.6■□□□□ 0.25
CHRNA3-201ENST00000326828 MCMDC2Q4G0Z9 681 aa16.6■□□□□ 0.25
CHRNA3-201ENST00000326828 ILDR1Q86SU0 546 aaPredicted RBP16.6■□□□□ 0.25
CHRNA3-201ENST00000326828 KIAA1468Q9P260 1216 aa16.6■□□□□ 0.25
CHRNA3-201ENST00000326828 U3KPZ7 1027 aaPredicted RBP16.6■□□□□ 0.25
CHRNA3-201ENST00000326828 NEXNQ0ZGT2 675 aa16.6■□□□□ 0.25
CHRNA3-201ENST00000326828 DHX32Q7L7V1 743 aaKnown RBP16.6■□□□□ 0.25
CHRNA3-201ENST00000326828 DPF2Q92785 391 aa16.6■□□□□ 0.25
CHRNA3-201ENST00000326828 PXDNLA1KZ92 1463 aa16.6■□□□□ 0.25
CHRNA3-201ENST00000326828 DDX58O95786 925 aaKnown RBP16.59■□□□□ 0.25
CHRNA3-201ENST00000326828 TIMM10P62072 90 aa16.59■□□□□ 0.25
CHRNA3-201ENST00000326828 FMR1NBQ8N0W7 255 aaPredicted RBP16.59■□□□□ 0.25
CHRNA3-201ENST00000326828 PFKFB2O60825 505 aa16.58■□□□□ 0.25
CHRNA3-201ENST00000326828 TPM4P67936 248 aa16.58■□□□□ 0.25
CHRNA3-201ENST00000326828 FANCCQ00597 558 aa16.58■□□□□ 0.25
CHRNA3-201ENST00000326828 TNNI3KQ59H18 835 aa16.58■□□□□ 0.25
CHRNA3-201ENST00000326828 COPS6Q7L5N1 327 aa16.58■□□□□ 0.25
CHRNA3-201ENST00000326828 XAGE3Q8WTP9 111 aa16.58■□□□□ 0.25
CHRNA3-201ENST00000326828 ARGLU1Q9NWB6 273 aaPredicted RBP16.58■□□□□ 0.25
CHRNA3-201ENST00000326828 FPGT-TNNI3KV9GXZ4 949 aa16.58■□□□□ 0.25
CHRNA3-201ENST00000326828 ZNF609O15014 1411 aa16.58■□□□□ 0.25
CHRNA3-201ENST00000326828 H2AFXP16104 143 aaPredicted RBP16.58■□□□□ 0.24
CHRNA3-201ENST00000326828 CAPN2P17655 700 aa16.58■□□□□ 0.24
CHRNA3-201ENST00000326828 SNRKQ9NRH2 765 aa16.58■□□□□ 0.24
CHRNA3-201ENST00000326828 TMEM232C9JQI7 657 aa16.58■□□□□ 0.24
CHRNA3-201ENST00000326828 RXRAP19793 462 aa16.58■□□□□ 0.24
CHRNA3-201ENST00000326828 UBASH3AP57075 661 aa16.58■□□□□ 0.24
CHRNA3-201ENST00000326828 EVCP57679 992 aa16.58■□□□□ 0.24
CHRNA3-201ENST00000326828 SYNE3Q6ZMZ3 975 aa16.58■□□□□ 0.24
CHRNA3-201ENST00000326828 KIF2AO00139 706 aaPredicted RBP16.57■□□□□ 0.24
CHRNA3-201ENST00000326828 ZNF202O95125 648 aa16.57■□□□□ 0.24
CHRNA3-201ENST00000326828 ETF1P62495 437 aaKnown RBP16.57■□□□□ 0.24
CHRNA3-201ENST00000326828 CCDC150Q8NCX0 1101 aa16.57■□□□□ 0.24
CHRNA3-201ENST00000326828 C8orf76Q96K31 380 aa16.57■□□□□ 0.24
CHRNA3-201ENST00000326828 HDAC5Q9UQL6 1122 aa16.57■□□□□ 0.24
CHRNA3-201ENST00000326828 PDIA3P30101 505 aaKnown RBP16.57■□□□□ 0.24
CHRNA3-201ENST00000326828 GNG11P61952 73 aa16.57■□□□□ 0.24
CHRNA3-201ENST00000326828 NAA16Q6N069 864 aaPredicted RBP16.57■□□□□ 0.24
CHRNA3-201ENST00000326828 KRBA2Q6ZNG9 492 aa16.57■□□□□ 0.24
CHRNA3-201ENST00000326828 SMARCC2Q8TAQ2 1214 aa16.57■□□□□ 0.24
CHRNA3-201ENST00000326828 SIRT1Q96EB6 747 aa16.57■□□□□ 0.24
CHRNA3-201ENST00000326828 AKAP12Q02952 1782 aa16.56■□□□□ 0.24
CHRNA3-201ENST00000326828 CPLX1O14810 134 aa16.56■□□□□ 0.24
CHRNA3-201ENST00000326828 SPTLC2O15270 562 aa16.56■□□□□ 0.24
CHRNA3-201ENST00000326828 SPECC1Q5M775 1068 aa16.56■□□□□ 0.24
CHRNA3-201ENST00000326828 OSBPL5Q9H0X9 879 aaPredicted RBP16.56■□□□□ 0.24
CHRNA3-201ENST00000326828 ORC3Q9UBD5 711 aaPredicted RBP16.56■□□□□ 0.24
CHRNA3-201ENST00000326828 RGPD1P0DJD0 1748 aa16.56■□□□□ 0.24
CHRNA3-201ENST00000326828 E7EWF7 191 aa16.56■□□□□ 0.24
CHRNA3-201ENST00000326828 CYP2C19P33261 490 aa16.56■□□□□ 0.24
CHRNA3-201ENST00000326828 KARSQ15046 597 aaKnown RBP16.56■□□□□ 0.24
CHRNA3-201ENST00000326828 KLHL34Q8N239 644 aa16.56■□□□□ 0.24
CHRNA3-201ENST00000326828 AIFM3Q96NN9 605 aa16.56■□□□□ 0.24
CHRNA3-201ENST00000326828 FANCGO15287 622 aa16.55■□□□□ 0.24
CHRNA3-201ENST00000326828 RNMTO43148 476 aaKnown RBP16.55■□□□□ 0.24
CHRNA3-201ENST00000326828 OAS2P29728 719 aaKnown RBP16.55■□□□□ 0.24
CHRNA3-201ENST00000326828 FKBP4Q02790 459 aaKnown RBP eCLIP16.55■□□□□ 0.24
CHRNA3-201ENST00000326828 SKIDA1Q1XH10 827 aa16.55■□□□□ 0.24
CHRNA3-201ENST00000326828 PLEKHO1Q53GL0 409 aaPredicted RBP16.55■□□□□ 0.24
CHRNA3-201ENST00000326828 CERS3Q8IU89 383 aa16.55■□□□□ 0.24
CHRNA3-201ENST00000326828 SMARCE1Q969G3 411 aa16.55■□□□□ 0.24
CHRNA3-201ENST00000326828 L2HGDHQ9H9P8 463 aa16.55■□□□□ 0.24
CHRNA3-201ENST00000326828 BABAM1Q9NWV8 329 aa16.55■□□□□ 0.24
CHRNA3-201ENST00000326828 DESI2Q9BSY9 194 aa16.55■□□□□ 0.24
CHRNA3-201ENST00000326828 NRXN3Q9Y4C0 1643 aa16.55■□□□□ 0.24
CHRNA3-201ENST00000326828 SPATA31D1Q6ZQQ2 1576 aa16.55■□□□□ 0.24
CHRNA3-201ENST00000326828 PNOCQ13519 176 aa16.55■□□□□ 0.24
CHRNA3-201ENST00000326828 USPL1Q5W0Q7 1092 aa16.55■□□□□ 0.24
CHRNA3-201ENST00000326828 LINC00301Q8NCQ3 95 aa16.55■□□□□ 0.24
CHRNA3-201ENST00000326828 CCDC85AQ96PX6 553 aaPredicted RBP16.55■□□□□ 0.24
CHRNA3-201ENST00000326828 FDPSP14324 419 aaKnown RBP16.54■□□□□ 0.24
CHRNA3-201ENST00000326828 ATP5JP18859 108 aa16.54■□□□□ 0.24
CHRNA3-201ENST00000326828 TNNT3P45378 269 aaPredicted RBP16.54■□□□□ 0.24
CHRNA3-201ENST00000326828 WASHC4Q2M389 1173 aa16.54■□□□□ 0.24
CHRNA3-201ENST00000326828 ADALQ6DHV7 355 aa16.54■□□□□ 0.24
CHRNA3-201ENST00000326828 EID1Q9Y6B2 187 aa16.54■□□□□ 0.24
CHRNA3-201ENST00000326828 CARMIL3Q8ND23 1372 aa16.54■□□□□ 0.24
CHRNA3-201ENST00000326828 TMEM2Q9UHN6 1383 aa16.54■□□□□ 0.24
CHRNA3-201ENST00000326828 NEURL1BA8MQ27 555 aa16.54■□□□□ 0.24
CHRNA3-201ENST00000326828 GOLGA8BA8MQT2 603 aa16.54■□□□□ 0.24
CHRNA3-201ENST00000326828 PFKFB1P16118 471 aa16.54■□□□□ 0.24
CHRNA3-201ENST00000326828 GCKRQ14397 625 aa16.54■□□□□ 0.24
CHRNA3-201ENST00000326828 TSGA10IPQ3SY00 556 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms