RNA–Protein interactions for RNA: ENST00000324659.12

NLRC3-201, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 5 BASIC

Gene NLRC3, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-201ENST00000324659 CEP135Q66GS9 1140 aa14.1□□□□□ -0.15
NLRC3-201ENST00000324659 AOPEPQ8N6M6 819 aa14.1□□□□□ -0.15
NLRC3-201ENST00000324659 SMTNL1A8MU46 457 aa14.1□□□□□ -0.15
NLRC3-201ENST00000324659 SLFN14P0C7P3 912 aa14.1□□□□□ -0.15
NLRC3-201ENST00000324659 MCMDC2Q4G0Z9 681 aa14.1□□□□□ -0.15
NLRC3-201ENST00000324659 SLC52A2Q9HAB3 445 aa14.1□□□□□ -0.15
NLRC3-201ENST00000324659 CTNNA3Q9UI47 895 aa14.1□□□□□ -0.15
NLRC3-201ENST00000324659 BIN1O00499 593 aa14.09□□□□□ -0.15
NLRC3-201ENST00000324659 SNRPA1P09661 255 aaKnown RBP14.09□□□□□ -0.15
NLRC3-201ENST00000324659 TIMM10P62072 90 aa14.09□□□□□ -0.15
NLRC3-201ENST00000324659 PTPN12Q05209 780 aaKnown RBP14.09□□□□□ -0.15
NLRC3-201ENST00000324659 ST7Q9NRC1 585 aa14.09□□□□□ -0.15
NLRC3-201ENST00000324659 U3KPZ7 1027 aaPredicted RBP14.09□□□□□ -0.15
NLRC3-201ENST00000324659 MARF1Q9Y4F3 1742 aaKnown RBP14.09□□□□□ -0.15
NLRC3-201ENST00000324659 CTIFO43310 598 aaKnown RBP14.09□□□□□ -0.15
NLRC3-201ENST00000324659 PHKG2P15735 406 aa14.09□□□□□ -0.15
NLRC3-201ENST00000324659 ISM2Q6H9L7 571 aa14.09□□□□□ -0.15
NLRC3-201ENST00000324659 SDF4Q9BRK5 362 aa14.09□□□□□ -0.15
NLRC3-201ENST00000324659 GPHNQ9NQX3 736 aaPredicted RBP14.09□□□□□ -0.15
NLRC3-201ENST00000324659 A0A1B0GVL5 298 aa14.09□□□□□ -0.15
NLRC3-201ENST00000324659 POLR3DP05423 398 aaPredicted RBP14.09□□□□□ -0.15
NLRC3-201ENST00000324659 ATP5JP18859 108 aa14.09□□□□□ -0.15
NLRC3-201ENST00000324659 HAND2P61296 217 aa14.09□□□□□ -0.15
NLRC3-201ENST00000324659 LRRC8AQ8IWT6 810 aa14.09□□□□□ -0.15
NLRC3-201ENST00000324659 NSUN7Q8NE18 718 aaKnown RBP14.09□□□□□ -0.15
NLRC3-201ENST00000324659 KDM3BQ7LBC6 1761 aa14.08□□□□□ -0.15
NLRC3-201ENST00000324659 CCDC69A6NI79 296 aa14.08□□□□□ -0.16
NLRC3-201ENST00000324659 GABPB1Q06547 395 aaPredicted RBP14.08□□□□□ -0.16
NLRC3-201ENST00000324659 IQCB1Q15051 598 aa14.08□□□□□ -0.16
NLRC3-201ENST00000324659 STX1AQ16623 288 aa14.08□□□□□ -0.16
NLRC3-201ENST00000324659 HSP90AB3PQ58FF7 597 aa14.08□□□□□ -0.16
NLRC3-201ENST00000324659 TTLL5Q6EMB2 1281 aa14.08□□□□□ -0.16
NLRC3-201ENST00000324659 RBM43Q6ZSC3 357 aaKnown RBP14.08□□□□□ -0.16
NLRC3-201ENST00000324659 ADGRL3Q9HAR2 1447 aa14.08□□□□□ -0.16
NLRC3-201ENST00000324659 LMBR1LQ6UX01 489 aa14.08□□□□□ -0.16
NLRC3-201ENST00000324659 METTL22Q9BUU2 404 aaPredicted RBP14.08□□□□□ -0.16
NLRC3-201ENST00000324659 ZSCAN16Q9H4T2 348 aaPredicted RBP14.08□□□□□ -0.16
NLRC3-201ENST00000324659 ARHGAP23Q9P227 1491 aa14.08□□□□□ -0.16
NLRC3-201ENST00000324659 CYP27B1O15528 508 aa14.08□□□□□ -0.16
NLRC3-201ENST00000324659 CTDNEP1O95476 244 aa14.08□□□□□ -0.16
NLRC3-201ENST00000324659 GPTP24298 496 aa14.08□□□□□ -0.16
NLRC3-201ENST00000324659 TERF2Q15554 542 aa14.08□□□□□ -0.16
NLRC3-201ENST00000324659 KRT222Q8N1A0 295 aa14.08□□□□□ -0.16
NLRC3-201ENST00000324659 GJB4Q9NTQ9 266 aa14.08□□□□□ -0.16
NLRC3-201ENST00000324659 SF3A1Q15459 793 aaKnown RBP14.07□□□□□ -0.16
NLRC3-201ENST00000324659 PTPN14Q15678 1187 aa14.07□□□□□ -0.16
NLRC3-201ENST00000324659 ZRSR1Q15695 479 aaKnown RBP14.07□□□□□ -0.16
NLRC3-201ENST00000324659 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.07□□□□□ -0.16
NLRC3-201ENST00000324659 SNRKQ9NRH2 765 aa14.07□□□□□ -0.16
NLRC3-201ENST00000324659 ZNF215Q9UL58 517 aaPredicted RBP14.07□□□□□ -0.16
NLRC3-201ENST00000324659 FER1L4A9Z1Z3 1794 aa14.07□□□□□ -0.16
NLRC3-201ENST00000324659 MED1Q15648 1581 aaPredicted RBP14.06□□□□□ -0.16
NLRC3-201ENST00000324659 SMC2O95347 1197 aa14.06□□□□□ -0.16
NLRC3-201ENST00000324659 USPL1Q5W0Q7 1092 aa14.06□□□□□ -0.16
NLRC3-201ENST00000324659 ZCRB1Q8TBF4 217 aaKnown RBP14.06□□□□□ -0.16
NLRC3-201ENST00000324659 ADD1P35611 737 aaKnown RBP14.06□□□□□ -0.16
NLRC3-201ENST00000324659 DHX32Q7L7V1 743 aaKnown RBP14.06□□□□□ -0.16
NLRC3-201ENST00000324659 ZNF594Q96JF6 807 aaPredicted RBP14.06□□□□□ -0.16
NLRC3-201ENST00000324659 DDX41Q9UJV9 622 aaKnown RBP14.06□□□□□ -0.16
NLRC3-201ENST00000324659 UTYO14607 1347 aa14.06□□□□□ -0.16
NLRC3-201ENST00000324659 TTLL7Q6ZT98 887 aa14.06□□□□□ -0.16
NLRC3-201ENST00000324659 TSGA10IPQ3SY00 556 aa14.05□□□□□ -0.16
NLRC3-201ENST00000324659 COPRSQ9NQ92 184 aa14.05□□□□□ -0.16
NLRC3-201ENST00000324659 SLIT1O75093 1534 aa14.05□□□□□ -0.16
NLRC3-201ENST00000324659 PFKFB2O60825 505 aa14.05□□□□□ -0.16
NLRC3-201ENST00000324659 FKBP4Q02790 459 aaKnown RBP eCLIP14.05□□□□□ -0.16
NLRC3-201ENST00000324659 SNW1Q13573 536 aaKnown RBP14.05□□□□□ -0.16
NLRC3-201ENST00000324659 DHX40Q8IX18 779 aaKnown RBP14.05□□□□□ -0.16
NLRC3-201ENST00000324659 RFX5P48382 616 aaPredicted RBP14.05□□□□□ -0.16
NLRC3-201ENST00000324659 PTPN21Q16825 1174 aa14.05□□□□□ -0.16
NLRC3-201ENST00000324659 CEP57L1Q8IYX8 460 aa14.05□□□□□ -0.16
NLRC3-201ENST00000324659 KIF18AQ8NI77 898 aa14.05□□□□□ -0.16
NLRC3-201ENST00000324659 DCAF5Q96JK2 942 aa14.05□□□□□ -0.16
NLRC3-201ENST00000324659 HAUS7Q99871 368 aa14.05□□□□□ -0.16
NLRC3-201ENST00000324659 ALDH8A1Q9H2A2 487 aaPredicted RBP14.05□□□□□ -0.16
NLRC3-201ENST00000324659 PAG1Q9NWQ8 432 aa14.05□□□□□ -0.16
NLRC3-201ENST00000324659 PAXBP1Q9Y5B6 917 aa14.05□□□□□ -0.16
NLRC3-201ENST00000324659 E7EWF7 191 aa14.04□□□□□ -0.16
NLRC3-201ENST00000324659 KBTBD3Q8NAB2 608 aa14.04□□□□□ -0.16
NLRC3-201ENST00000324659 ANO10Q9NW15 660 aa14.04□□□□□ -0.16
NLRC3-201ENST00000324659 ADAMTS2O95450 1211 aa14.04□□□□□ -0.16
NLRC3-201ENST00000324659 FAM160A1Q05DH4 1040 aa14.04□□□□□ -0.16
NLRC3-201ENST00000324659 STK38Q15208 465 aa14.04□□□□□ -0.16
NLRC3-201ENST00000324659 ELF2Q15723 593 aa14.04□□□□□ -0.16
NLRC3-201ENST00000324659 ZNF396Q96N95 335 aaPredicted RBP14.04□□□□□ -0.16
NLRC3-201ENST00000324659 CALCOCO1Q9P1Z2 691 aa14.04□□□□□ -0.16
NLRC3-201ENST00000324659 RCOR1Q9UKL0 485 aa14.04□□□□□ -0.16
NLRC3-201ENST00000324659 NFAT5O94916 1531 aa14.04□□□□□ -0.16
NLRC3-201ENST00000324659 NUTM2BA6NNL0 878 aaPredicted RBP14.03□□□□□ -0.16
NLRC3-201ENST00000324659 NUTM2EB1AL46 878 aaPredicted RBP14.03□□□□□ -0.16
NLRC3-201ENST00000324659 NUTM2AQ8IVF1 878 aaPredicted RBP14.03□□□□□ -0.16
NLRC3-201ENST00000324659 SMARCC2Q8TAQ2 1214 aa14.03□□□□□ -0.16
NLRC3-201ENST00000324659 PCDHA7Q9UN72 937 aa14.03□□□□□ -0.16
NLRC3-201ENST00000324659 NDUFA8P51970 172 aa14.03□□□□□ -0.16
NLRC3-201ENST00000324659 WASHC4Q2M389 1173 aa14.03□□□□□ -0.16
NLRC3-201ENST00000324659 DPCR1Q3MIW9 517 aa14.03□□□□□ -0.16
NLRC3-201ENST00000324659 TMC6Q7Z403 805 aa14.03□□□□□ -0.16
NLRC3-201ENST00000324659 TMX1Q9H3N1 280 aa14.03□□□□□ -0.16
NLRC3-201ENST00000324659 ILDR1Q86SU0 546 aaPredicted RBP14.03□□□□□ -0.16
NLRC3-201ENST00000324659 CLIC4Q9Y696 253 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms