RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 NOM1Q5C9Z4 860 aaKnown RBP25.36■■□□□ 1.65
SSNA1-201ENST00000322310 MED23Q9ULK4 1368 aa25.35■■□□□ 1.65
SSNA1-201ENST00000322310 NF2P35240 595 aa25.35■■□□□ 1.65
SSNA1-201ENST00000322310 PTPN12Q05209 780 aaKnown RBP25.35■■□□□ 1.65
SSNA1-201ENST00000322310 OGFOD1Q8N543 542 aa25.35■■□□□ 1.65
SSNA1-201ENST00000322310 ZNF646O15015 1829 aaPredicted RBP25.35■■□□□ 1.65
SSNA1-201ENST00000322310 SREBF2Q12772 1141 aa25.34■■□□□ 1.65
SSNA1-201ENST00000322310 FKTNO75072 461 aa25.33■■□□□ 1.65
SSNA1-201ENST00000322310 CTSWP56202 376 aa25.33■■□□□ 1.65
SSNA1-201ENST00000322310 WDR43Q15061 677 aaKnown RBP eCLIP25.33■■□□□ 1.65
SSNA1-201ENST00000322310 CDC5LQ99459 802 aaKnown RBP25.33■■□□□ 1.65
SSNA1-201ENST00000322310 METTL22Q9BUU2 404 aaPredicted RBP25.33■■□□□ 1.65
SSNA1-201ENST00000322310 MINPP1Q9UNW1 487 aa25.33■■□□□ 1.65
SSNA1-201ENST00000322310 ADAMTS8Q9UP79 889 aa25.32■■□□□ 1.64
SSNA1-201ENST00000322310 MYBBP1AQ9BQG0 1328 aaKnown RBP25.32■■□□□ 1.64
SSNA1-201ENST00000322310 SPEF2Q9C093 1822 aa25.31■■□□□ 1.64
SSNA1-201ENST00000322310 ZNF853P0CG23 659 aa25.31■■□□□ 1.64
SSNA1-201ENST00000322310 CCT4P50991 539 aaKnown RBP25.31■■□□□ 1.64
SSNA1-201ENST00000322310 STRIP1Q5VSL9 837 aa25.31■■□□□ 1.64
SSNA1-201ENST00000322310 TXNRD3Q86VQ6 643 aa25.31■■□□□ 1.64
SSNA1-201ENST00000322310 CFHR5Q9BXR6 569 aa25.31■■□□□ 1.64
SSNA1-201ENST00000322310 GREM2Q9H772 168 aa25.31■■□□□ 1.64
SSNA1-201ENST00000322310 FZD1Q9UP38 647 aa25.31■■□□□ 1.64
SSNA1-201ENST00000322310 HTTP42858 3142 aa25.3■■□□□ 1.64
SSNA1-201ENST00000322310 ARMC9Q7Z3E5 817 aa25.3■■□□□ 1.64
SSNA1-201ENST00000322310 TTLL11Q8NHH1 800 aa25.3■■□□□ 1.64
SSNA1-201ENST00000322310 BSDC1Q9NW68 430 aaPredicted RBP25.3■■□□□ 1.64
SSNA1-201ENST00000322310 MYO3BQ8WXR4 1341 aa25.3■■□□□ 1.64
SSNA1-201ENST00000322310 SPRYD7Q5W111 196 aa25.29■■□□□ 1.64
SSNA1-201ENST00000322310 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.29■■□□□ 1.64
SSNA1-201ENST00000322310 MAP3K2Q9Y2U5 619 aa25.29■■□□□ 1.64
SSNA1-201ENST00000322310 MKI67P46013 3256 aaKnown RBP25.28■■□□□ 1.64
SSNA1-201ENST00000322310 LDLRAD1Q5T700 205 aa25.28■■□□□ 1.64
SSNA1-201ENST00000322310 KIAA0825Q8IV33 1275 aa25.28■■□□□ 1.64
SSNA1-201ENST00000322310 C8orf58Q8NAV2 365 aa25.28■■□□□ 1.64
SSNA1-201ENST00000322310 COA1Q9GZY4 146 aa25.28■■□□□ 1.64
SSNA1-201ENST00000322310 ANGEL1Q9UNK9 670 aaKnown RBP25.28■■□□□ 1.64
SSNA1-201ENST00000322310 DDX58O95786 925 aaKnown RBP25.27■■□□□ 1.64
SSNA1-201ENST00000322310 IGKV5-2P06315 115 aa25.27■■□□□ 1.64
SSNA1-201ENST00000322310 KLRK1P26718 216 aa25.27■■□□□ 1.64
SSNA1-201ENST00000322310 APOBEC3FQ8IUX4 373 aaKnown RBP25.27■■□□□ 1.64
SSNA1-201ENST00000322310 IFT57Q9NWB7 429 aa25.26■■□□□ 1.63
SSNA1-201ENST00000322310 TTLL5Q6EMB2 1281 aa25.25■■□□□ 1.63
SSNA1-201ENST00000322310 TRIM17Q9Y577 477 aa25.25■■□□□ 1.63
SSNA1-201ENST00000322310 POTEFA5A3E0 1075 aa25.24■■□□□ 1.63
SSNA1-201ENST00000322310 GNAI1P63096 354 aa25.24■■□□□ 1.63
SSNA1-201ENST00000322310 GCC1Q96CN9 775 aa25.24■■□□□ 1.63
SSNA1-201ENST00000322310 ZBED3Q96IU2 234 aaPredicted RBP25.24■■□□□ 1.63
SSNA1-201ENST00000322310 ALDH1A1P00352 501 aa25.23■■□□□ 1.63
SSNA1-201ENST00000322310 GTF2IP78347 998 aa25.23■■□□□ 1.63
SSNA1-201ENST00000322310 CWF19L2Q2TBE0 894 aaKnown RBP25.23■■□□□ 1.63
SSNA1-201ENST00000322310 OTOP1Q7RTM1 612 aa25.23■■□□□ 1.63
SSNA1-201ENST00000322310 IFNL1Q8IU54 200 aa25.23■■□□□ 1.63
SSNA1-201ENST00000322310 LEMD3Q9Y2U8 911 aa25.23■■□□□ 1.63
SSNA1-201ENST00000322310 CENPFP49454 3210 aa25.23■■□□□ 1.63
SSNA1-201ENST00000322310 ZNF804BA4D1E1 1349 aa25.22■■□□□ 1.63
SSNA1-201ENST00000322310 PI4KAP2A4QPH2 592 aa25.22■■□□□ 1.63
SSNA1-201ENST00000322310 CCDC30Q5VVM6 783 aa25.22■■□□□ 1.63
SSNA1-201ENST00000322310 PI4KAP1Q8N8J0 262 aa25.22■■□□□ 1.63
SSNA1-201ENST00000322310 SLC10A4Q96EP9 437 aa25.22■■□□□ 1.63
SSNA1-201ENST00000322310 CLMNQ96JQ2 1002 aa25.22■■□□□ 1.63
SSNA1-201ENST00000322310 DEFB129Q9H1M3 183 aa25.22■■□□□ 1.63
SSNA1-201ENST00000322310 SSC5DA1L4H1 1573 aa25.22■■□□□ 1.63
SSNA1-201ENST00000322310 MYH3P11055 1940 aa25.22■■□□□ 1.63
SSNA1-201ENST00000322310 MANSC4A6NHS7 340 aaPredicted RBP25.21■■□□□ 1.63
SSNA1-201ENST00000322310 IGF2BP3O00425 579 aaKnown RBP eCLIP25.21■■□□□ 1.63
SSNA1-201ENST00000322310 MMP14P50281 582 aa25.21■■□□□ 1.63
SSNA1-201ENST00000322310 KSR2Q6VAB6 950 aa25.21■■□□□ 1.63
SSNA1-201ENST00000322310 APAF1O14727 1248 aa25.2■■□□□ 1.62
SSNA1-201ENST00000322310 IGHMBP2P38935 993 aaKnown RBP25.2■■□□□ 1.62
SSNA1-201ENST00000322310 HABP4Q5JVS0 413 aaKnown RBP25.2■■□□□ 1.62
SSNA1-201ENST00000322310 UBE3BQ7Z3V4 1068 aa25.2■■□□□ 1.62
SSNA1-201ENST00000322310 PCDHAC2Q9Y5I4 1007 aa25.2■■□□□ 1.62
SSNA1-201ENST00000322310 INHBEP58166 350 aa25.19■■□□□ 1.62
SSNA1-201ENST00000322310 TSPYL6Q8N831 410 aa25.19■■□□□ 1.62
SSNA1-201ENST00000322310 WNK4Q96J92 1243 aa25.19■■□□□ 1.62
SSNA1-201ENST00000322310 COL1A1P02452 1464 aaPredicted RBP25.19■■□□□ 1.62
SSNA1-201ENST00000322310 BRCA2P51587 3418 aa25.18■■□□□ 1.62
SSNA1-201ENST00000322310 NEURL1BA8MQ27 555 aa25.18■■□□□ 1.62
SSNA1-201ENST00000322310 NEXNQ0ZGT2 675 aa25.18■■□□□ 1.62
SSNA1-201ENST00000322310 DDX10Q13206 875 aaKnown RBP25.18■■□□□ 1.62
SSNA1-201ENST00000322310 DLGAP5Q15398 846 aa25.18■■□□□ 1.62
SSNA1-201ENST00000322310 ZBTB48P10074 688 aaPredicted RBP25.17■■□□□ 1.62
SSNA1-201ENST00000322310 ITGA6P23229 1130 aa25.17■■□□□ 1.62
SSNA1-201ENST00000322310 CALD1Q05682 793 aaKnown RBP25.17■■□□□ 1.62
SSNA1-201ENST00000322310 MAP3K11Q16584 847 aa25.17■■□□□ 1.62
SSNA1-201ENST00000322310 INTS3Q68E01 1043 aaKnown RBP25.17■■□□□ 1.62
SSNA1-201ENST00000322310 CERS5Q8N5B7 392 aa25.17■■□□□ 1.62
SSNA1-201ENST00000322310 ANKRD2Q9GZV1 360 aa25.17■■□□□ 1.62
SSNA1-201ENST00000322310 SNAP23O00161 211 aa25.16■■□□□ 1.62
SSNA1-201ENST00000322310 CD99L2Q8TCZ2 262 aa25.16■■□□□ 1.62
SSNA1-201ENST00000322310 CD209Q9NNX6 404 aa25.16■■□□□ 1.62
SSNA1-201ENST00000322310 CLRN2A0PK11 232 aa25.15■■□□□ 1.62
SSNA1-201ENST00000322310 H7C1W4 665 aa25.15■■□□□ 1.62
SSNA1-201ENST00000322310 PPP1R12BO60237 982 aaPredicted RBP25.15■■□□□ 1.62
SSNA1-201ENST00000322310 KCNJ4P48050 445 aa25.15■■□□□ 1.62
SSNA1-201ENST00000322310 MPHOSPH8Q99549 860 aa25.15■■□□□ 1.62
SSNA1-201ENST00000322310 PTPN22Q9Y2R2 807 aa25.15■■□□□ 1.62
SSNA1-201ENST00000322310 F8W031 263 aaPredicted RBP25.14■■□□□ 1.62
SSNA1-201ENST00000322310 GJA5P36382 358 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms