RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 PTPN14Q15678 1187 aa18.79■□□□□ 0.6
CRAT-201ENST00000318080 ERCC6LQ2NKX8 1250 aa18.79■□□□□ 0.6
CRAT-201ENST00000318080 GORABQ5T7V8 394 aa18.79■□□□□ 0.6
CRAT-201ENST00000318080 LRRC8AQ8IWT6 810 aa18.79■□□□□ 0.6
CRAT-201ENST00000318080 ZNF397Q8NF99 534 aaPredicted RBP18.79■□□□□ 0.6
CRAT-201ENST00000318080 SECISBP2LQ93073 1101 aaKnown RBP18.79■□□□□ 0.6
CRAT-201ENST00000318080 GOLPH3LQ9H4A5 285 aa18.79■□□□□ 0.6
CRAT-201ENST00000318080 PAXBP1Q9Y5B6 917 aa18.79■□□□□ 0.6
CRAT-201ENST00000318080 AKAP4Q5JQC9 854 aa18.78■□□□□ 0.6
CRAT-201ENST00000318080 HIP1O00291 1037 aa18.78■□□□□ 0.6
CRAT-201ENST00000318080 HSP90B1P14625 803 aaKnown RBP18.78■□□□□ 0.6
CRAT-201ENST00000318080 PIP4K2AP48426 406 aaPredicted RBP18.78■□□□□ 0.6
CRAT-201ENST00000318080 C1orf141Q5JVX7 400 aa18.78■□□□□ 0.6
CRAT-201ENST00000318080 LINS1Q8NG48 757 aa18.78■□□□□ 0.6
CRAT-201ENST00000318080 HSPA1LP34931 641 aa18.77■□□□□ 0.6
CRAT-201ENST00000318080 ADD1P35611 737 aaKnown RBP18.77■□□□□ 0.6
CRAT-201ENST00000318080 SCRN1Q12765 414 aa18.77■□□□□ 0.6
CRAT-201ENST00000318080 A0A0G2JLW4 131 aa18.77■□□□□ 0.6
CRAT-201ENST00000318080 H3BQV1 296 aa18.77■□□□□ 0.6
CRAT-201ENST00000318080 IFFO2Q5TF58 517 aa18.77■□□□□ 0.6
CRAT-201ENST00000318080 CYP21A2P08686 494 aa18.76■□□□□ 0.59
CRAT-201ENST00000318080 MYL6BP14649 208 aa18.76■□□□□ 0.59
CRAT-201ENST00000318080 SLC39A6Q13433 755 aa18.76■□□□□ 0.59
CRAT-201ENST00000318080 PDIA6Q15084 440 aa18.76■□□□□ 0.59
CRAT-201ENST00000318080 AMOTQ4VCS5 1084 aa18.76■□□□□ 0.59
CRAT-201ENST00000318080 NEK1Q96PY6 1258 aa18.76■□□□□ 0.59
CRAT-201ENST00000318080 DBNLQ9UJU6 430 aaKnown RBP18.76■□□□□ 0.59
CRAT-201ENST00000318080 COL22A1Q8NFW1 1626 aaPredicted RBP18.76■□□□□ 0.59
CRAT-201ENST00000318080 TAF3Q5VWG9 929 aa18.76■□□□□ 0.59
CRAT-201ENST00000318080 STOX1Q6ZVD7 989 aa18.76■□□□□ 0.59
CRAT-201ENST00000318080 TIGD1Q96MW7 591 aa18.76■□□□□ 0.59
CRAT-201ENST00000318080 CCDC69A6NI79 296 aa18.76■□□□□ 0.59
CRAT-201ENST00000318080 POLR3GO15318 223 aaPredicted RBP18.76■□□□□ 0.59
CRAT-201ENST00000318080 DNAJC2Q99543 621 aaKnown RBP18.76■□□□□ 0.59
CRAT-201ENST00000318080 ALDH8A1Q9H2A2 487 aaPredicted RBP18.76■□□□□ 0.59
CRAT-201ENST00000318080 KDM3BQ7LBC6 1761 aa18.75■□□□□ 0.59
CRAT-201ENST00000318080 PHKG2P15735 406 aa18.75■□□□□ 0.59
CRAT-201ENST00000318080 GUCY1B3Q02153 619 aa18.75■□□□□ 0.59
CRAT-201ENST00000318080 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.75■□□□□ 0.59
CRAT-201ENST00000318080 CCAR1Q8IX12 1150 aaKnown RBP18.75■□□□□ 0.59
CRAT-201ENST00000318080 SYCP1Q15431 976 aa18.74■□□□□ 0.59
CRAT-201ENST00000318080 TSGA10IPQ3SY00 556 aa18.74■□□□□ 0.59
CRAT-201ENST00000318080 USPL1Q5W0Q7 1092 aa18.74■□□□□ 0.59
CRAT-201ENST00000318080 CARD10Q9BWT7 1032 aa18.74■□□□□ 0.59
CRAT-201ENST00000318080 EPC1Q9H2F5 836 aa18.74■□□□□ 0.59
CRAT-201ENST00000318080 ABCC6O95255 1503 aa18.74■□□□□ 0.59
CRAT-201ENST00000318080 CTDNEP1O95476 244 aa18.74■□□□□ 0.59
CRAT-201ENST00000318080 HNRNPH2P55795 449 aaKnown RBP18.74■□□□□ 0.59
CRAT-201ENST00000318080 TFCP2Q12800 502 aa18.74■□□□□ 0.59
CRAT-201ENST00000318080 DDX46Q7L014 1031 aaKnown RBP18.74■□□□□ 0.59
CRAT-201ENST00000318080 RIC3Q7Z5B4 369 aa18.74■□□□□ 0.59
CRAT-201ENST00000318080 C8orf37Q96NL8 207 aa18.74■□□□□ 0.59
CRAT-201ENST00000318080 NCOA5Q9HCD5 579 aaKnown RBP18.74■□□□□ 0.59
CRAT-201ENST00000318080 CCT2P78371 535 aaKnown RBP18.73■□□□□ 0.59
CRAT-201ENST00000318080 SNW1Q13573 536 aaKnown RBP18.73■□□□□ 0.59
CRAT-201ENST00000318080 NEK11Q8NG66 645 aa18.73■□□□□ 0.59
CRAT-201ENST00000318080 USP28Q96RU2 1077 aa18.73■□□□□ 0.59
CRAT-201ENST00000318080 ZNF609O15014 1411 aa18.73■□□□□ 0.59
CRAT-201ENST00000318080 KDM6AO15550 1401 aaPredicted RBP18.73■□□□□ 0.59
CRAT-201ENST00000318080 JCADQ9P266 1359 aa18.73■□□□□ 0.59
CRAT-201ENST00000318080 UTYO14607 1347 aa18.73■□□□□ 0.59
CRAT-201ENST00000318080 TRIM34Q9BYJ4 488 aa18.73■□□□□ 0.59
CRAT-201ENST00000318080 HMG20BQ9P0W2 317 aa18.73■□□□□ 0.59
CRAT-201ENST00000318080 GOLGA6L19H0YKK7 550 aa18.72■□□□□ 0.59
CRAT-201ENST00000318080 PTPN21Q16825 1174 aa18.72■□□□□ 0.59
CRAT-201ENST00000318080 CCZ1BP86790 482 aa18.72■□□□□ 0.59
CRAT-201ENST00000318080 CCZ1P86791 482 aaPredicted RBP18.72■□□□□ 0.59
CRAT-201ENST00000318080 APOBRQ0VD83 1088 aa18.72■□□□□ 0.59
CRAT-201ENST00000318080 NYAP1Q6ZVC0 841 aa18.72■□□□□ 0.59
CRAT-201ENST00000318080 CHST3Q7LGC8 479 aa18.72■□□□□ 0.59
CRAT-201ENST00000318080 DHX40Q8IX18 779 aaKnown RBP18.72■□□□□ 0.59
CRAT-201ENST00000318080 MYD88Q99836 296 aa18.72■□□□□ 0.59
CRAT-201ENST00000318080 DBNDD2Q9BQY9 259 aa18.72■□□□□ 0.59
CRAT-201ENST00000318080 CCDC66A2RUB6 948 aa18.71■□□□□ 0.59
CRAT-201ENST00000318080 IL2RBP14784 551 aa18.71■□□□□ 0.59
CRAT-201ENST00000318080 NOL10Q9BSC4 688 aaKnown RBP18.71■□□□□ 0.59
CRAT-201ENST00000318080 ZCCHC17Q9NP64 241 aaKnown RBP18.71■□□□□ 0.59
CRAT-201ENST00000318080 HEG1Q9ULI3 1381 aa18.71■□□□□ 0.59
CRAT-201ENST00000318080 NEURL1BA8MQ27 555 aa18.71■□□□□ 0.59
CRAT-201ENST00000318080 SYT10Q6XYQ8 523 aa18.71■□□□□ 0.59
CRAT-201ENST00000318080 OVOS2A0A0G2JMS6 1433 aa18.71■□□□□ 0.59
CRAT-201ENST00000318080 NFATC2IPQ8NCF5 419 aa18.7■□□□□ 0.58
CRAT-201ENST00000318080 NSUN7Q8NE18 718 aaKnown RBP18.7■□□□□ 0.58
CRAT-201ENST00000318080 DDX21Q9NR30 783 aaKnown RBP eCLIP18.7■□□□□ 0.58
CRAT-201ENST00000318080 SEC31AO94979 1220 aaKnown RBP18.7■□□□□ 0.58
CRAT-201ENST00000318080 GCKRQ14397 625 aa18.7■□□□□ 0.58
CRAT-201ENST00000318080 CCAR2Q8N163 923 aaKnown RBP18.7■□□□□ 0.58
CRAT-201ENST00000318080 ZCRB1Q8TBF4 217 aaKnown RBP18.7■□□□□ 0.58
CRAT-201ENST00000318080 XAGE3Q8WTP9 111 aa18.7■□□□□ 0.58
CRAT-201ENST00000318080 COL14A1Q05707 1796 aaKnown RBP18.7■□□□□ 0.58
CRAT-201ENST00000318080 TNNI3KQ59H18 835 aa18.7■□□□□ 0.58
CRAT-201ENST00000318080 COPS6Q7L5N1 327 aa18.7■□□□□ 0.58
CRAT-201ENST00000318080 ILDR1Q86SU0 546 aaPredicted RBP18.7■□□□□ 0.58
CRAT-201ENST00000318080 CFAP45Q9UL16 551 aa18.7■□□□□ 0.58
CRAT-201ENST00000318080 FPGT-TNNI3KV9GXZ4 949 aa18.7■□□□□ 0.58
CRAT-201ENST00000318080 SLU7O95391 586 aaKnown RBP18.69■□□□□ 0.58
CRAT-201ENST00000318080 CLCN6P51797 869 aa18.69■□□□□ 0.58
CRAT-201ENST00000318080 TEX2Q8IWB9 1127 aa18.69■□□□□ 0.58
CRAT-201ENST00000318080 IFNL2Q8IZJ0 200 aa18.69■□□□□ 0.58
CRAT-201ENST00000318080 SMARCC2Q8TAQ2 1214 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms