RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 MSL1Q68DK7 614 aa21.56■■□□□ 1.04
UBE2N-201ENST00000318066 ISM2Q6H9L7 571 aa21.56■■□□□ 1.04
UBE2N-201ENST00000318066 TNNC1P63316 161 aa21.56■■□□□ 1.04
UBE2N-201ENST00000318066 AFMP43652 599 aa21.55■■□□□ 1.04
UBE2N-201ENST00000318066 ASIC1P78348 528 aa21.55■■□□□ 1.04
UBE2N-201ENST00000318066 JAKMIP2Q96AA8 810 aa21.55■■□□□ 1.04
UBE2N-201ENST00000318066 TRERF1Q96PN7 1200 aa21.55■■□□□ 1.04
UBE2N-201ENST00000318066 PLB1Q6P1J6 1458 aa21.55■■□□□ 1.04
UBE2N-201ENST00000318066 TRIM14Q14142 442 aa21.55■■□□□ 1.04
UBE2N-201ENST00000318066 MTRF1LQ9UGC7 380 aaKnown RBP21.55■■□□□ 1.04
UBE2N-201ENST00000318066 SMC6Q96SB8 1091 aa21.54■■□□□ 1.04
UBE2N-201ENST00000318066 PHF23Q9BUL5 403 aaPredicted RBP21.54■■□□□ 1.04
UBE2N-201ENST00000318066 CEP128Q6ZU80 1094 aa21.54■■□□□ 1.04
UBE2N-201ENST00000318066 ERO1AQ96HE7 468 aa21.54■■□□□ 1.04
UBE2N-201ENST00000318066 PPP1R1BQ9UD71 204 aaPredicted RBP21.54■■□□□ 1.04
UBE2N-201ENST00000318066 GRIPAP1Q4V328 841 aa21.54■■□□□ 1.04
UBE2N-201ENST00000318066 DHX32Q7L7V1 743 aaKnown RBP21.54■■□□□ 1.04
UBE2N-201ENST00000318066 PIK3C2GO75747 1445 aa21.54■■□□□ 1.04
UBE2N-201ENST00000318066 TSPY3P0CV98 308 aa21.54■■□□□ 1.04
UBE2N-201ENST00000318066 TSPY8P0CW00 308 aa21.54■■□□□ 1.04
UBE2N-201ENST00000318066 GTF2A1P52655 376 aaPredicted RBP21.54■■□□□ 1.04
UBE2N-201ENST00000318066 KRT79Q5XKE5 535 aa21.54■■□□□ 1.04
UBE2N-201ENST00000318066 OTUD6BQ8N6M0 293 aa21.54■■□□□ 1.04
UBE2N-201ENST00000318066 PABPN1LA6NDY0 278 aaKnown RBP21.53■■□□□ 1.04
UBE2N-201ENST00000318066 TERF1P54274 439 aa21.53■■□□□ 1.04
UBE2N-201ENST00000318066 SMAP1Q8IYB5 467 aaPredicted RBP21.53■■□□□ 1.04
UBE2N-201ENST00000318066 IQUBQ8NA54 791 aa21.53■■□□□ 1.04
UBE2N-201ENST00000318066 IRX3P78415 501 aaPredicted RBP21.53■■□□□ 1.04
UBE2N-201ENST00000318066 HDXQ7Z353 690 aa21.53■■□□□ 1.04
UBE2N-201ENST00000318066 IPO4Q8TEX9 1081 aaKnown RBP21.53■■□□□ 1.04
UBE2N-201ENST00000318066 STX8Q9UNK0 236 aa21.53■■□□□ 1.04
UBE2N-201ENST00000318066 LUC7L2Q9Y383 392 aaKnown RBP21.53■■□□□ 1.04
UBE2N-201ENST00000318066 C6orf229H3BNL8 230 aa21.53■■□□□ 1.04
UBE2N-201ENST00000318066 NEK11Q8NG66 645 aa21.53■■□□□ 1.04
UBE2N-201ENST00000318066 GPTP24298 496 aa21.52■■□□□ 1.04
UBE2N-201ENST00000318066 KIAA1524Q8TCG1 905 aa21.52■■□□□ 1.04
UBE2N-201ENST00000318066 VAT1LQ9HCJ6 419 aa21.52■■□□□ 1.04
UBE2N-201ENST00000318066 COMMD10Q9Y6G5 202 aa21.52■■□□□ 1.04
UBE2N-201ENST00000318066 SLC4A4Q9Y6R1 1079 aa21.52■■□□□ 1.04
UBE2N-201ENST00000318066 ATP5J2-PTCD1G3V325 749 aa21.52■■□□□ 1.04
UBE2N-201ENST00000318066 CYP7A1P22680 504 aa21.52■■□□□ 1.04
UBE2N-201ENST00000318066 AKAP4Q5JQC9 854 aa21.52■■□□□ 1.04
UBE2N-201ENST00000318066 SAMM50Q9Y512 469 aa21.52■■□□□ 1.04
UBE2N-201ENST00000318066 MYL5Q02045 173 aa21.52■■□□□ 1.03
UBE2N-201ENST00000318066 IMPG2Q9BZV3 1241 aa21.52■■□□□ 1.03
UBE2N-201ENST00000318066 LMOD1P29536 600 aaPredicted RBP21.51■■□□□ 1.03
UBE2N-201ENST00000318066 ACEP12821 1306 aa21.51■■□□□ 1.03
UBE2N-201ENST00000318066 GNA11P29992 359 aa21.51■■□□□ 1.03
UBE2N-201ENST00000318066 ZNF830Q96NB3 372 aaPredicted RBP21.51■■□□□ 1.03
UBE2N-201ENST00000318066 PAG1Q9NWQ8 432 aa21.51■■□□□ 1.03
UBE2N-201ENST00000318066 HS2ST1Q7LGA3 356 aa21.51■■□□□ 1.03
UBE2N-201ENST00000318066 GPATCH11Q8N954 259 aa21.51■■□□□ 1.03
UBE2N-201ENST00000318066 MMRN2Q9H8L6 949 aa21.51■■□□□ 1.03
UBE2N-201ENST00000318066 RNF113AO15541 343 aaKnown RBP21.51■■□□□ 1.03
UBE2N-201ENST00000318066 PLCG2P16885 1265 aa21.51■■□□□ 1.03
UBE2N-201ENST00000318066 CROCCP2Q86T23 111 aa21.51■■□□□ 1.03
UBE2N-201ENST00000318066 IBSPP21815 317 aaPredicted RBP21.5■■□□□ 1.03
UBE2N-201ENST00000318066 PUF60Q9UHX1 559 aaKnown RBP21.5■■□□□ 1.03
UBE2N-201ENST00000318066 ELP1O95163 1332 aa21.5■■□□□ 1.03
UBE2N-201ENST00000318066 FOXO3O43524 673 aa21.5■■□□□ 1.03
UBE2N-201ENST00000318066 KRT2P35908 639 aa21.5■■□□□ 1.03
UBE2N-201ENST00000318066 TSHZ3Q63HK5 1081 aa21.5■■□□□ 1.03
UBE2N-201ENST00000318066 RUFY3Q7L099 469 aa21.5■■□□□ 1.03
UBE2N-201ENST00000318066 MSANTD4Q8NCY6 345 aa21.5■■□□□ 1.03
UBE2N-201ENST00000318066 BICD1Q96G01 975 aa21.5■■□□□ 1.03
UBE2N-201ENST00000318066 AK2P54819 239 aa21.5■■□□□ 1.03
UBE2N-201ENST00000318066 ZBTB40Q9NUA8 1239 aa21.5■■□□□ 1.03
UBE2N-201ENST00000318066 ZFYVE9O95405 1425 aa21.5■■□□□ 1.03
UBE2N-201ENST00000318066 FAM83GA6ND36 823 aa21.49■■□□□ 1.03
UBE2N-201ENST00000318066 ATP2A2P16615 1042 aaKnown RBP21.49■■□□□ 1.03
UBE2N-201ENST00000318066 KRT28Q7Z3Y7 464 aa21.49■■□□□ 1.03
UBE2N-201ENST00000318066 NAP1L3Q99457 506 aaPredicted RBP21.49■■□□□ 1.03
UBE2N-201ENST00000318066 FAM160A1Q05DH4 1040 aa21.49■■□□□ 1.03
UBE2N-201ENST00000318066 NMIQ13287 307 aaPredicted RBP21.49■■□□□ 1.03
UBE2N-201ENST00000318066 CREB3L3Q68CJ9 461 aa21.49■■□□□ 1.03
UBE2N-201ENST00000318066 MTUS1Q9ULD2 1270 aa21.49■■□□□ 1.03
UBE2N-201ENST00000318066 CFAP57Q96MR6 1250 aa21.49■■□□□ 1.03
UBE2N-201ENST00000318066 RBM28Q9NW13 759 aaKnown RBP21.49■■□□□ 1.03
UBE2N-201ENST00000318066 CHPF2Q9P2E5 772 aa21.49■■□□□ 1.03
UBE2N-201ENST00000318066 SSX2IPQ9Y2D8 614 aa21.49■■□□□ 1.03
UBE2N-201ENST00000318066 AOX1Q06278 1338 aa21.49■■□□□ 1.03
UBE2N-201ENST00000318066 VWA3BQ502W6 1294 aa21.49■■□□□ 1.03
UBE2N-201ENST00000318066 CEP85Q6P2H3 762 aa21.49■■□□□ 1.03
UBE2N-201ENST00000318066 LLPHQ9BRT6 129 aaKnown RBP21.49■■□□□ 1.03
UBE2N-201ENST00000318066 THOC2Q8NI27 1593 aaKnown RBP21.48■■□□□ 1.03
UBE2N-201ENST00000318066 ALDH3A1P30838 453 aa21.48■■□□□ 1.03
UBE2N-201ENST00000318066 NAA16Q6N069 864 aaPredicted RBP21.48■■□□□ 1.03
UBE2N-201ENST00000318066 FAM76AQ8TAV0 307 aa21.48■■□□□ 1.03
UBE2N-201ENST00000318066 DHX58Q96C10 678 aa21.48■■□□□ 1.03
UBE2N-201ENST00000318066 SYNCQ9H7C4 482 aa21.48■■□□□ 1.03
UBE2N-201ENST00000318066 RPL13P26373 211 aaKnown RBP21.48■■□□□ 1.03
UBE2N-201ENST00000318066 ATP5DP30049 168 aa21.48■■□□□ 1.03
UBE2N-201ENST00000318066 NAPAP54920 295 aa21.48■■□□□ 1.03
UBE2N-201ENST00000318066 SLC9C2Q5TAH2 1124 aa21.48■■□□□ 1.03
UBE2N-201ENST00000318066 UTP14AQ9BVJ6 771 aaKnown RBP21.48■■□□□ 1.03
UBE2N-201ENST00000318066 MARCKSP29966 332 aaPredicted RBP21.48■■□□□ 1.03
UBE2N-201ENST00000318066 XAGE3Q8WTP9 111 aa21.48■■□□□ 1.03
UBE2N-201ENST00000318066 DRC1Q96MC2 740 aa21.47■■□□□ 1.03
UBE2N-201ENST00000318066 BABAM1Q9NWV8 329 aa21.47■■□□□ 1.03
UBE2N-201ENST00000318066 SAMD15Q9P1V8 674 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms