RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 SEC62Q99442 399 aaKnown RBP23.08■■□□□ 1.28
AP3S1-201ENST00000316788 FERMT3Q86UX7 667 aa23.07■■□□□ 1.28
AP3S1-201ENST00000316788 CDCA7Q9BWT1 371 aaPredicted RBP23.07■■□□□ 1.28
AP3S1-201ENST00000316788 EP400Q96L91 3159 aa23.06■■□□□ 1.28
AP3S1-201ENST00000316788 EXOSC10Q01780 885 aaKnown RBP23.06■■□□□ 1.28
AP3S1-201ENST00000316788 ATL3Q6DD88 541 aa23.06■■□□□ 1.28
AP3S1-201ENST00000316788 FAM200AQ8TCP9 573 aa23.06■■□□□ 1.28
AP3S1-201ENST00000316788 PLA2G12BQ9BX93 195 aa23.06■■□□□ 1.28
AP3S1-201ENST00000316788 CHMP3Q9Y3E7 222 aa23.06■■□□□ 1.28
AP3S1-201ENST00000316788 GOLIM4O00461 696 aa23.05■■□□□ 1.28
AP3S1-201ENST00000316788 RNF113AO15541 343 aaKnown RBP23.05■■□□□ 1.28
AP3S1-201ENST00000316788 STOX1Q6ZVD7 989 aa23.05■■□□□ 1.28
AP3S1-201ENST00000316788 PIBF1Q8WXW3 757 aa23.05■■□□□ 1.28
AP3S1-201ENST00000316788 BRF1Q92994 677 aa23.05■■□□□ 1.28
AP3S1-201ENST00000316788 NEUROD6Q96NK8 337 aa23.05■■□□□ 1.28
AP3S1-201ENST00000316788 GOLGA6L4A6NEF3 574 aa23.05■■□□□ 1.28
AP3S1-201ENST00000316788 A1BGP04217 495 aa23.05■■□□□ 1.28
AP3S1-201ENST00000316788 LIG1P18858 919 aa23.05■■□□□ 1.28
AP3S1-201ENST00000316788 STK3Q13188 491 aa23.05■■□□□ 1.28
AP3S1-201ENST00000316788 MARCH10Q8NA82 808 aaPredicted RBP23.05■■□□□ 1.28
AP3S1-201ENST00000316788 CLSTN2Q9H4D0 955 aa23.05■■□□□ 1.28
AP3S1-201ENST00000316788 CFAP45Q9UL16 551 aa23.05■■□□□ 1.28
AP3S1-201ENST00000316788 JAK2O60674 1132 aa23.04■■□□□ 1.28
AP3S1-201ENST00000316788 IFIT1P09914 478 aaKnown RBP23.04■■□□□ 1.28
AP3S1-201ENST00000316788 HSP90B1P14625 803 aaKnown RBP23.04■■□□□ 1.28
AP3S1-201ENST00000316788 TEX13AQ9BXU3 409 aaPredicted RBP23.04■■□□□ 1.28
AP3S1-201ENST00000316788 AKAP2Q9Y2D5 859 aa23.04■■□□□ 1.28
AP3S1-201ENST00000316788 NDUFB9Q9Y6M9 179 aa23.04■■□□□ 1.28
AP3S1-201ENST00000316788 A0A1B0GUL7 405 aa23.03■■□□□ 1.28
AP3S1-201ENST00000316788 ZFYP08048 801 aaPredicted RBP23.03■■□□□ 1.28
AP3S1-201ENST00000316788 SCRN1Q12765 414 aa23.03■■□□□ 1.28
AP3S1-201ENST00000316788 TCIRG1Q13488 830 aa23.03■■□□□ 1.28
AP3S1-201ENST00000316788 VSIG10Q8N0Z9 540 aa23.03■■□□□ 1.28
AP3S1-201ENST00000316788 CAVIN2O95810 425 aa23.02■■□□□ 1.28
AP3S1-201ENST00000316788 TYRO3Q06418 890 aa23.02■■□□□ 1.28
AP3S1-201ENST00000316788 SASS6Q6UVJ0 657 aa23.02■■□□□ 1.28
AP3S1-201ENST00000316788 NSUN7Q8NE18 718 aaKnown RBP23.02■■□□□ 1.28
AP3S1-201ENST00000316788 ZNF274Q96GC6 653 aaPredicted RBP23.02■■□□□ 1.28
AP3S1-201ENST00000316788 CEP126Q9P2H0 1117 aa23.02■■□□□ 1.28
AP3S1-201ENST00000316788 R3HCC1Q9Y3T6 440 aaKnown RBP23.02■■□□□ 1.28
AP3S1-201ENST00000316788 MAST3O60307 1309 aa23.02■■□□□ 1.28
AP3S1-201ENST00000316788 BRWD3Q6RI45 1802 aa23.02■■□□□ 1.28
AP3S1-201ENST00000316788 H3BQV1 296 aa23.02■■□□□ 1.28
AP3S1-201ENST00000316788 HSPD1P10809 573 aaKnown RBP23.02■■□□□ 1.28
AP3S1-201ENST00000316788 EVCP57679 992 aa23.02■■□□□ 1.28
AP3S1-201ENST00000316788 TIMM10P62072 90 aa23.02■■□□□ 1.28
AP3S1-201ENST00000316788 LRRC24Q50LG9 513 aa23.02■■□□□ 1.28
AP3S1-201ENST00000316788 IFFO2Q5TF58 517 aa23.02■■□□□ 1.28
AP3S1-201ENST00000316788 TNMDQ9H2S6 317 aa23.02■■□□□ 1.28
AP3S1-201ENST00000316788 PCCAP05165 728 aaPredicted RBP23.01■■□□□ 1.27
AP3S1-201ENST00000316788 FAM173BQ6P4H8 233 aa23.01■■□□□ 1.27
AP3S1-201ENST00000316788 ZBTB3Q9H5J0 574 aa23.01■■□□□ 1.27
AP3S1-201ENST00000316788 DACT1Q9NYF0 836 aa23.01■■□□□ 1.27
AP3S1-201ENST00000316788 MRVI1Q9Y6F6 885 aa23.01■■□□□ 1.27
AP3S1-201ENST00000316788 SALL1Q9NSC2 1324 aa23.01■■□□□ 1.27
AP3S1-201ENST00000316788 E7EWF7 191 aa23■■□□□ 1.27
AP3S1-201ENST00000316788 CHGBP05060 677 aa23■■□□□ 1.27
AP3S1-201ENST00000316788 FGD1P98174 961 aa23■■□□□ 1.27
AP3S1-201ENST00000316788 SPTLC3Q9NUV7 552 aa23■■□□□ 1.27
AP3S1-201ENST00000316788 CTNNA3Q9UI47 895 aa23■■□□□ 1.27
AP3S1-201ENST00000316788 GOLGA6L6A8MZA4 724 aa22.99■■□□□ 1.27
AP3S1-201ENST00000316788 DTNBO60941 627 aa22.99■■□□□ 1.27
AP3S1-201ENST00000316788 CCDC158Q5M9N0 1113 aa22.99■■□□□ 1.27
AP3S1-201ENST00000316788 CSF1RP07333 972 aa22.99■■□□□ 1.27
AP3S1-201ENST00000316788 HSP90AA2PQ14568 343 aaPredicted RBP22.99■■□□□ 1.27
AP3S1-201ENST00000316788 CCDC57Q2TAC2 916 aa22.99■■□□□ 1.27
AP3S1-201ENST00000316788 RGS22Q8NE09 1264 aa22.99■■□□□ 1.27
AP3S1-201ENST00000316788 PGBD1Q96JS3 809 aa22.99■■□□□ 1.27
AP3S1-201ENST00000316788 TFIP11Q9UBB9 837 aaKnown RBP22.99■■□□□ 1.27
AP3S1-201ENST00000316788 RCOR1Q9UKL0 485 aa22.98■■□□□ 1.27
AP3S1-201ENST00000316788 LAMA4Q16363 1823 aa22.98■■□□□ 1.27
AP3S1-201ENST00000316788 CDHR2Q9BYE9 1310 aa22.97■■□□□ 1.27
AP3S1-201ENST00000316788 TOGARAM1Q9Y4F4 1720 aa22.97■■□□□ 1.27
AP3S1-201ENST00000316788 PTPDC1A2A3K4 754 aa22.97■■□□□ 1.27
AP3S1-201ENST00000316788 KRT27Q7Z3Y8 459 aa22.97■■□□□ 1.27
AP3S1-201ENST00000316788 DYNC1I1O14576 645 aa22.96■■□□□ 1.27
AP3S1-201ENST00000316788 CTAGE5O15320 804 aa22.96■■□□□ 1.27
AP3S1-201ENST00000316788 CTDNEP1O95476 244 aa22.96■■□□□ 1.27
AP3S1-201ENST00000316788 ADD1P35611 737 aaKnown RBP22.96■■□□□ 1.27
AP3S1-201ENST00000316788 TDRD7Q8NHU6 1098 aaKnown RBP22.96■■□□□ 1.27
AP3S1-201ENST00000316788 ZNF594Q96JF6 807 aaPredicted RBP22.96■■□□□ 1.27
AP3S1-201ENST00000316788 WDR19Q8NEZ3 1342 aa22.96■■□□□ 1.27
AP3S1-201ENST00000316788 AP5Z1O43299 807 aa22.96■■□□□ 1.27
AP3S1-201ENST00000316788 BICD2Q8TD16 824 aa22.96■■□□□ 1.27
AP3S1-201ENST00000316788 ZNF396Q96N95 335 aaPredicted RBP22.96■■□□□ 1.27
AP3S1-201ENST00000316788 TMOD3Q9NYL9 352 aa22.96■■□□□ 1.27
AP3S1-201ENST00000316788 APOBRQ0VD83 1088 aa22.95■■□□□ 1.26
AP3S1-201ENST00000316788 NOLC1Q14978 699 aaKnown RBP eCLIP22.95■■□□□ 1.263e-6■□□□□ 9.5
AP3S1-201ENST00000316788 TPRNQ4KMQ1 711 aa22.95■■□□□ 1.26
AP3S1-201ENST00000316788 TTC39AQ5SRH9 613 aa22.95■■□□□ 1.26
AP3S1-201ENST00000316788 KIF6Q6ZMV9 814 aa22.95■■□□□ 1.26
AP3S1-201ENST00000316788 ZBTB38Q8NAP3 1195 aaPredicted RBP22.95■■□□□ 1.26
AP3S1-201ENST00000316788 ZNF512BQ96KM6 892 aaPredicted RBP22.95■■□□□ 1.26
AP3S1-201ENST00000316788 PRIMPOLQ96LW4 560 aa22.95■■□□□ 1.26
AP3S1-201ENST00000316788 PUS3Q9BZE2 481 aaKnown RBP22.95■■□□□ 1.26
AP3S1-201ENST00000316788 M0R2C6 588 aa22.94■■□□□ 1.26
AP3S1-201ENST00000316788 PDIA3P30101 505 aaKnown RBP22.94■■□□□ 1.26
AP3S1-201ENST00000316788 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.94■■□□□ 1.26
AP3S1-201ENST00000316788 ACSBG1Q96GR2 724 aa22.94■■□□□ 1.26
AP3S1-201ENST00000316788 MAP7D2Q96T17 732 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms