RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 RTL9Q8NET4 1388 aa10.42□□□□□ -0.74
TPM3-203ENST00000312970 XDHP47989 1333 aa10.42□□□□□ -0.74
TPM3-203ENST00000312970 COL4A1P02462 1669 aa10.42□□□□□ -0.74
TPM3-203ENST00000312970 ZNF316A6NFI3 1004 aaPredicted RBP10.42□□□□□ -0.74
TPM3-203ENST00000312970 NEURL1BA8MQ27 555 aa10.42□□□□□ -0.74
TPM3-203ENST00000312970 ATP2B4P23634 1241 aa10.42□□□□□ -0.74
TPM3-203ENST00000312970 CTSWP56202 376 aa10.42□□□□□ -0.74
TPM3-203ENST00000312970 CWF19L2Q2TBE0 894 aaKnown RBP10.42□□□□□ -0.74
TPM3-203ENST00000312970 WDR63Q8IWG1 891 aa10.42□□□□□ -0.74
TPM3-203ENST00000312970 DCPSQ96C86 337 aaKnown RBP10.42□□□□□ -0.74
TPM3-203ENST00000312970 ZNF408Q9H9D4 720 aa10.42□□□□□ -0.74
TPM3-203ENST00000312970 BSDC1Q9NW68 430 aaPredicted RBP10.42□□□□□ -0.74
TPM3-203ENST00000312970 EGFRP00533 1210 aa10.41□□□□□ -0.74
TPM3-203ENST00000312970 FLIIQ13045 1269 aa10.41□□□□□ -0.74
TPM3-203ENST00000312970 DGKZQ13574 1117 aa10.41□□□□□ -0.74
TPM3-203ENST00000312970 KRT26Q7Z3Y9 468 aa10.41□□□□□ -0.74
TPM3-203ENST00000312970 PODNQ7Z5L7 613 aa10.41□□□□□ -0.74
TPM3-203ENST00000312970 AGBL3Q8NEM8 1001 aa10.41□□□□□ -0.74
TPM3-203ENST00000312970 GREM2Q9H772 168 aa10.41□□□□□ -0.74
TPM3-203ENST00000312970 MINPP1Q9UNW1 487 aa10.41□□□□□ -0.74
TPM3-203ENST00000312970 SALL2Q9Y467 1007 aaPredicted RBP10.41□□□□□ -0.74
TPM3-203ENST00000312970 POLR2AP24928 1970 aaKnown RBP10.41□□□□□ -0.74
TPM3-203ENST00000312970 USP17L3A6NCW0 530 aa10.4□□□□□ -0.74
TPM3-203ENST00000312970 USP17L4A6NCW7 530 aa10.4□□□□□ -0.74
TPM3-203ENST00000312970 VAMP4O75379 141 aa10.4□□□□□ -0.74
TPM3-203ENST00000312970 FKBP5Q13451 457 aaPredicted RBP10.4□□□□□ -0.74
TPM3-203ENST00000312970 GCKRQ14397 625 aa10.4□□□□□ -0.74
TPM3-203ENST00000312970 KIF4BQ2VIQ3 1234 aa10.4□□□□□ -0.74
TPM3-203ENST00000312970 RSBN1LQ6PCB5 846 aaPredicted RBP10.4□□□□□ -0.74
TPM3-203ENST00000312970 USP17L1Q7RTZ2 530 aa10.4□□□□□ -0.74
TPM3-203ENST00000312970 UBE3BQ7Z3V4 1068 aa10.4□□□□□ -0.74
TPM3-203ENST00000312970 HS6ST3Q8IZP7 471 aa10.4□□□□□ -0.74
TPM3-203ENST00000312970 C2orf69Q8N8R5 385 aa10.4□□□□□ -0.74
TPM3-203ENST00000312970 FANCIQ9NVI1 1328 aa10.39□□□□□ -0.75
TPM3-203ENST00000312970 WTIPA6NIX2 430 aaPredicted RBP10.39□□□□□ -0.75
TPM3-203ENST00000312970 IGHMBP2P38935 993 aaKnown RBP10.39□□□□□ -0.75
TPM3-203ENST00000312970 CCT4P50991 539 aaKnown RBP10.39□□□□□ -0.75
TPM3-203ENST00000312970 HUNKP57058 714 aa10.39□□□□□ -0.75
TPM3-203ENST00000312970 ZNF280AP59817 542 aaPredicted RBP10.39□□□□□ -0.75
TPM3-203ENST00000312970 EXOSC9Q06265 439 aaKnown RBP10.39□□□□□ -0.75
TPM3-203ENST00000312970 DLK2Q6UY11 383 aa10.39□□□□□ -0.75
TPM3-203ENST00000312970 LINS1Q8NG48 757 aa10.39□□□□□ -0.75
TPM3-203ENST00000312970 DNAAF4Q8WXU2 420 aa10.39□□□□□ -0.75
TPM3-203ENST00000312970 ZIC5Q96T25 663 aa10.39□□□□□ -0.75
TPM3-203ENST00000312970 PLA2G12BQ9BX93 195 aa10.39□□□□□ -0.75
TPM3-203ENST00000312970 MYH16Q9H6N6 1097 aa10.39□□□□□ -0.75
TPM3-203ENST00000312970 CA12O43570 354 aa10.38□□□□□ -0.75
TPM3-203ENST00000312970 CSF1RP07333 972 aa10.38□□□□□ -0.75
TPM3-203ENST00000312970 USP17L8P0C7I0 530 aa10.38□□□□□ -0.75
TPM3-203ENST00000312970 BRPF1P55201 1214 aaPredicted RBP10.38□□□□□ -0.75
TPM3-203ENST00000312970 CASP7P55210 303 aa10.38□□□□□ -0.75
TPM3-203ENST00000312970 NOGQ13253 232 aa10.38□□□□□ -0.75
TPM3-203ENST00000312970 SCARF1Q14162 830 aa10.38□□□□□ -0.75
TPM3-203ENST00000312970 SULF1Q8IWU6 871 aa10.38□□□□□ -0.75
TPM3-203ENST00000312970 GMLQ99445 158 aa10.38□□□□□ -0.75
TPM3-203ENST00000312970 ANKRD2Q9GZV1 360 aa10.38□□□□□ -0.75
TPM3-203ENST00000312970 GBA2Q9HCG7 927 aaPredicted RBP10.38□□□□□ -0.75
TPM3-203ENST00000312970 LEMD3Q9Y2U8 911 aa10.38□□□□□ -0.75
TPM3-203ENST00000312970 ADM5C9JUS6 153 aa10.37□□□□□ -0.75
TPM3-203ENST00000312970 ITGA6P23229 1130 aa10.37□□□□□ -0.75
TPM3-203ENST00000312970 SOX10P56693 466 aa10.37□□□□□ -0.75
TPM3-203ENST00000312970 RGMBQ6NW40 437 aa10.37□□□□□ -0.75
TPM3-203ENST00000312970 CCDC102AQ96A19 550 aa10.37□□□□□ -0.75
TPM3-203ENST00000312970 MPHOSPH8Q99549 860 aa10.37□□□□□ -0.75
TPM3-203ENST00000312970 COA1Q9GZY4 146 aa10.37□□□□□ -0.75
TPM3-203ENST00000312970 MYOZ2Q9NPC6 264 aa10.37□□□□□ -0.75
TPM3-203ENST00000312970 GGA3Q9NZ52 723 aa10.37□□□□□ -0.75
TPM3-203ENST00000312970 SCN9AQ15858 1988 aa10.37□□□□□ -0.75
TPM3-203ENST00000312970 PSME4Q14997 1843 aa10.37□□□□□ -0.75
TPM3-203ENST00000312970 MKI67P46013 3256 aaKnown RBP10.37□□□□□ -0.75
TPM3-203ENST00000312970 MED23Q9ULK4 1368 aa10.37□□□□□ -0.75
TPM3-203ENST00000312970 CACNA1FO60840 1977 aa10.36□□□□□ -0.75
TPM3-203ENST00000312970 ZNF609O15014 1411 aa10.36□□□□□ -0.75
TPM3-203ENST00000312970 MMP14P50281 582 aa10.36□□□□□ -0.75
TPM3-203ENST00000312970 STRIP1Q5VSL9 837 aa10.36□□□□□ -0.75
TPM3-203ENST00000312970 ANGEL2Q5VTE6 544 aaKnown RBP10.36□□□□□ -0.75
TPM3-203ENST00000312970 FAM9BQ8IZU0 186 aa10.36□□□□□ -0.75
TPM3-203ENST00000312970 OGFOD1Q8N543 542 aa10.36□□□□□ -0.75
TPM3-203ENST00000312970 MYH3P11055 1940 aa10.36□□□□□ -0.75
TPM3-203ENST00000312970 AKAP11Q9UKA4 1901 aa10.36□□□□□ -0.75
TPM3-203ENST00000312970 ZNF804BA4D1E1 1349 aa10.35□□□□□ -0.75
TPM3-203ENST00000312970 ASTN2O75129 1339 aaPredicted RBP10.35□□□□□ -0.75
TPM3-203ENST00000312970 ANKRD18BA2A2Z9 1011 aa10.35□□□□□ -0.75
TPM3-203ENST00000312970 ZNF157P51786 506 aaPredicted RBP10.35□□□□□ -0.75
TPM3-203ENST00000312970 DACT2Q5SW24 774 aa10.35□□□□□ -0.75
TPM3-203ENST00000312970 BEND3Q5T5X7 828 aa10.35□□□□□ -0.75
TPM3-203ENST00000312970 TTLL5Q6EMB2 1281 aa10.35□□□□□ -0.75
TPM3-203ENST00000312970 TXNRD3Q86VQ6 643 aa10.35□□□□□ -0.75
TPM3-203ENST00000312970 FBXW7Q969H0 707 aa10.35□□□□□ -0.75
TPM3-203ENST00000312970 CDCA5Q96FF9 252 aa10.35□□□□□ -0.75
TPM3-203ENST00000312970 SPINK5Q9NQ38 1064 aaPredicted RBP10.35□□□□□ -0.75
TPM3-203ENST00000312970 MYO3BQ8WXR4 1341 aa10.34□□□□□ -0.75
TPM3-203ENST00000312970 PITPNM2Q9BZ72 1349 aa10.34□□□□□ -0.75
TPM3-203ENST00000312970 FAM155AB1AL88 458 aaPredicted RBP10.34□□□□□ -0.75
TPM3-203ENST00000312970 F6X3S4 739 aa10.34□□□□□ -0.75
TPM3-203ENST00000312970 KCNJ4P48050 445 aa10.34□□□□□ -0.75
TPM3-203ENST00000312970 FOXO4P98177 505 aa10.34□□□□□ -0.75
TPM3-203ENST00000312970 CHRNDQ07001 517 aa10.34□□□□□ -0.75
TPM3-203ENST00000312970 IFIT5Q13325 482 aaKnown RBP10.34□□□□□ -0.75
TPM3-203ENST00000312970 FKBP1BP68106 108 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms